RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Prr9Q8BV84 116 aa12.25□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 P01794 123 aa12.25□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Gm12888Q3UW77 119 aa12.25□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Wfdc21Q8BTE6 63 aa12.25□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Lgals6O54891 301 aa12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Ins1P01325 108 aa12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 TshbP12656 138 aa12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Bsph2Q0Q236 131 aa12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Spint3Q3UW09 88 aa12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Spink2Q8BMY7 86 aa12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Mcrip2Q9CQB2 160 aaKnown RBP12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Sptbn2Q68FG2 2388 aa12.24□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Ighv1-9A0A0A6YW37 117 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Ighv3-3A0A0A6YWL2 116 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Gata3P23772 443 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Edn3P48299 214 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Rpl32P62911 135 aaKnown RBP12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Mob4Q6PEB6 225 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 MturnQ8CGA4 131 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 4930447F04RikA2AFR2 126 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Sumo2P61957 95 aaKnown RBP12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Prss29Q99MS4 279 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Ufc1Q9CR09 167 aa12.23□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Abca1P41233 2261 aa12.22□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Zfyve26Q5DU37 2529 aa12.22□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Gm12845A0A0N4SUM5 588 aa12.22□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Tcte2E9PY37 120 aa12.22□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Vamp8O70404 101 aa12.22□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 FlnbQ80X90 2602 aaKnown RBP12.22□□□□□ -0.45
Ttc39b-202ENSMUST00000048274 Igkv20-101-2A0A0G2JDU3 113 aa12.21□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 P01724 129 aa12.21□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Ighv1-62-3P01754 117 aa12.21□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 TcraP01849 138 aa12.21□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Try10Q792Z1 246 aaKnown RBP12.21□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 RelnQ60841 3461 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Igkv4-57-1A0A075B5M4 119 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Iglc1A0A0G2JE99 106 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Cox8cA6H666 72 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm15557A6PWY0 234 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Defa34D3Z0J0 93 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm10036E9PYL9 178 aaKnown RBP12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 P01843 105 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Khdc1cQ4KL78 166 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm14137Q8CE97 175 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 AamdcQ8R0P4 122 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Q9CX63 252 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Atxn7l1Q9CZ05 146 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Krtap26-1Q9D7N2 215 aa12.2□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Fbn2Q61555 2907 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm17430F6RSK3 157 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 P01837 106 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Tex26Q0VB26 296 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Defb45Q3V490 66 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Olfr312Q7TRZ9 308 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm10295Q8CCF3 114 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Slc16a4Q8R0M8 500 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gkn1Q9CR36 201 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Q9D727 114 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Arl3Q9WUL7 182 aa12.19□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Pla2g2aP31482 146 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Mustn1Q99JI1 82 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm29289A0A087WPY7 166 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm4064A0A087WR82 380 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Rpl36-ps4A0A140T8U4 117 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm10352B2RWR6 380 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm21693J3QK27 380 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Rbmy1a1O35698 380 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 P01812 117 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Rasl11bQ922H7 247 aa12.18□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Pkd1l2Q7TN88 2461 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Igkv4-69A0A0B4J1I6 116 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm11565A2A4M7 156 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 P01820 115 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 P18527 97 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Hist1h1tQ07133 208 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gpr82Q8BZR0 328 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm16223Q8CBM3 117 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Mrpl36Q99N90 102 aa12.17□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Ighv1-66A0A075B5X5 117 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Gm5629P06327 117 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Defb33Q30KN3 62 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Defa26Q3L180 93 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Q4KKZ1 196 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Zfhx3Q61329 3726 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 P01739 132 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 S100a4P07091 101 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 TgfaP48030 159 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Ss18Q62280 418 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Spink12Q9D256 87 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Slamf6Q9ET39 351 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Tcf24V9GWT9 166 aa12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Prrc2aQ7TSC1 2158 aaKnown RBP12.16□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Lrrk2Q5S006 2527 aa12.15□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Tmem238A9JSM3 176 aa12.15□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Ccl25O35903 144 aa12.15□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Ang5Q5GAN1 145 aa12.15□□□□□ -0.46
Ttc39b-202ENSMUST00000048274 Casp6O08738 276 aa12.14□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Bri3P28662 125 aa12.14□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Ubtd1Q91WB7 227 aa12.14□□□□□ -0.47
Ttc39b-202ENSMUST00000048274 Tmem219Q9D123 240 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms