RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ighv1-53A0A075B5W3 117 aa10.26□□□□□ -0.77
Nup88-201ENSMUST00000035283 P01724 129 aa10.26□□□□□ -0.77
Nup88-201ENSMUST00000035283 P01727 129 aa10.26□□□□□ -0.77
Nup88-201ENSMUST00000035283 TshbP12656 138 aa10.26□□□□□ -0.77
Nup88-201ENSMUST00000035283 Olfr312Q7TRZ9 308 aa10.26□□□□□ -0.77
Nup88-201ENSMUST00000035283 Gm44965A0A0N4SVR3 59 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 P01725 110 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 Cks1brtQ3UNC9 96 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 Gkn1Q9CR36 201 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 ApomQ9Z1R3 190 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 Defb20Q30KP3 96 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 Obp2aQ8K1H9 176 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 Pla2g2dQ9WVF6 144 aa10.25□□□□□ -0.77
Nup88-201ENSMUST00000035283 Ighv1-62-3P01754 117 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 PolP10400 120 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Defb30Q30KN4 75 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Rbmxl2Q9DAE2 385 aaKnown RBP10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 CenpeQ6RT24 2474 aaKnown RBP10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Wfdc11A2A5H7 82 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Esp4A8R0T8 117 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Gm5878E9PUB3 99 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Egr1P08046 533 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Tmem30bQ8BHG3 353 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Mustn1Q99JI1 82 aa10.24□□□□□ -0.77
Nup88-201ENSMUST00000035283 Ighv3-4A0A0A6YXF1 117 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Gm5819E9PZ96 154 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Chac1Q8R3J5 223 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 TctaQ8VEA7 122 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Olfr976Q8VF15 326 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Q9CX63 252 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Dnajb12Q9QYI4 376 aaKnown RBP10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Ighv3-1A0A075B5S6 116 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Umad1E0CX23 159 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Defa3P28310 93 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Defa10P50708 93 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Defa15P50713 93 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 RhohQ9D3G9 191 aa10.23□□□□□ -0.77
Nup88-201ENSMUST00000035283 Csmd2V9GX34 3611 aa10.22□□□□□ -0.77
Nup88-201ENSMUST00000035283 Qrich2A0A140LIY9 2337 aa10.22□□□□□ -0.77
Nup88-201ENSMUST00000035283 Piezo1E2JF22 2547 aa10.22□□□□□ -0.77
Nup88-201ENSMUST00000035283 Gm12845A0A0N4SUM5 588 aa10.22□□□□□ -0.77
Nup88-201ENSMUST00000035283 Cox8cA6H666 72 aa10.22□□□□□ -0.77
Nup88-201ENSMUST00000035283 Uqcrfs1Q9CR68 274 aa10.22□□□□□ -0.77
Nup88-201ENSMUST00000035283 HilpdaQ9JLS0 64 aa10.22□□□□□ -0.77
Nup88-201ENSMUST00000035283 4930447F04RikA2AFR2 126 aa10.21□□□□□ -0.77
Nup88-201ENSMUST00000035283 P01896 185 aa10.21□□□□□ -0.77
Nup88-201ENSMUST00000035283 Cd69P37217 199 aa10.21□□□□□ -0.77
Nup88-201ENSMUST00000035283 Sumo2P61957 95 aaKnown RBP10.21□□□□□ -0.77
Nup88-201ENSMUST00000035283 Cdx4Q07424 282 aa10.21□□□□□ -0.77
Nup88-201ENSMUST00000035283 Ang5Q5GAN1 145 aa10.21□□□□□ -0.77
Nup88-201ENSMUST00000035283 Sptan1P16546 2472 aaKnown RBP10.21□□□□□ -0.78
Nup88-201ENSMUST00000035283 Gm45753A0A1C7CYU8 86 aa10.21□□□□□ -0.78
Nup88-201ENSMUST00000035283 Csn3P06796 181 aa10.21□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ndufa4Q62425 82 aaKnown RBP10.21□□□□□ -0.78
Nup88-201ENSMUST00000035283 Hif1anQ8BLR9 349 aa10.21□□□□□ -0.78
Nup88-201ENSMUST00000035283 Parm1Q923D3 296 aa10.21□□□□□ -0.78
Nup88-201ENSMUST00000035283 Mrpl36Q99N90 102 aa10.21□□□□□ -0.78
Nup88-201ENSMUST00000035283 Igkv20-101-2A0A0G2JDU3 113 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ighv1-74A0A0G2JGK2 117 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 S100a4P07091 101 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Gm21370Q3T9V6 190 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Odf1Q61999 247 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Psmb11Q8BG41 302 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Prss29Q99MS4 279 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Pradc1Q9D9N8 188 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Pgpep1Q9ESW8 209 aa10.2□□□□□ -0.78
Nup88-201ENSMUST00000035283 Gm28269A0A087WSG3 125 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Vamp8O70404 101 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 P01837 106 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Defb45Q3V490 66 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Zfp248Q640N4 576 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 AamdcQ8R0P4 122 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Arhgap32Q811P8 2089 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Trbv13-1A0A0B4J1P8 112 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ccl25O35903 144 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Tex26Q0VB26 296 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Fam222aQ6PGH4 453 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Nit2Q9JHW2 276 aa10.19□□□□□ -0.78
Nup88-201ENSMUST00000035283 Gm42674D3YUT9 64 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Tmem170bP86050 132 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 FshbQ60687 130 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ss18Q62280 418 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Tmem14cQ9CQN6 114 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Plac1Q9JI83 173 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Igkv4-70A0A0B4J1I5 116 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Mrps12O35680 139 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Socs3O35718 225 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Edn3P48299 214 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Sdhaf1Q3U276 118 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Gm94Q3V2D2 93 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Trav2Q5R1I9 109 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Tctex1d4Q8CDY7 219 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 Klk5Q9D140 293 aa10.18□□□□□ -0.78
Nup88-201ENSMUST00000035283 NbeaQ9EPN1 2936 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 Cited2O35740 269 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 TgfaP48030 159 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ormdl2Q9CQZ0 153 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 Ighv1-9A0A0A6YW37 117 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 Fam240aJ3QNP9 97 aa10.17□□□□□ -0.78
Nup88-201ENSMUST00000035283 Gm5629P06327 117 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms