RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Prpf8Q99PV0 2335 aaKnown RBP6.24□□□□□ -1.41
Lig3-201ENSMUST00000021039 Trav7-1A0A0G2JEV5 112 aa6.24□□□□□ -1.41
Lig3-201ENSMUST00000021039 Gm20517G3UVU6 152 aa6.24□□□□□ -1.41
Lig3-201ENSMUST00000021039 Igkv4-58A0A0G2JGI6 119 aa6.24□□□□□ -1.41
Lig3-201ENSMUST00000021039 Mrpl27Q99N92 148 aa6.24□□□□□ -1.41
Lig3-201ENSMUST00000021039 Smim10l1A0A087WNQ7 89 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Smim26Q3V460 107 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 SpinklQ8CEK3 90 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Atp6v0bQ91V37 205 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Shisa9Q9CZN4 424 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Igkv8-26A0A075B5N5 123 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Gm28269A0A087WSG3 125 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Ighv1-52A0A0A6YXC3 117 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 P01811 117 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Gm9958Q8C9U4 106 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Prss22Q9ER10 306 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Ep400Q8CHI8 3072 aaKnown RBP6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 SetxA2AKX3 2646 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Igkv4-78A0A0A6YYE5 119 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Gm21616B6ZB74 166 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 P01790 122 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Pla2g2dQ9WVF6 144 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Ndufa1O35683 70 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 P06330 118 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Hist1h2bmP10854 126 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Gm10188Q3V432 135 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Isg15Q64339 161 aaKnown RBP6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Hist1h2bhQ64478 126 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Hist2h2bbQ64525 126 aa6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Hist1h2bcQ6ZWY9 126 aaKnown RBP6.23□□□□□ -1.41
Lig3-201ENSMUST00000021039 Hbb-bsA8DUK4 147 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Socs3O35718 225 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Hbb-b1P02088 147 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Xcl1P47993 114 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Ankrd39Q9D2X0 183 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Plpp2Q9DAX2 276 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 SelenokQ9JLJ1 94 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Dpm2Q9Z324 84 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Ighv1-9A0A0A6YW37 117 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 LeprotO89013 131 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Morn3Q8C5T4 241 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Pcp4P63054 62 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 BC049762Q8C601 163 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Mrpl53Q9D1H8 118 aaKnown RBP6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Reg3dQ9QUS9 175 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Med12A2AGH6 2190 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 TncQ80YX1 2110 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Trav9d-1A0A075B699 112 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 PolP10400 120 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Gpx1P11352 201 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Saa4P31532 130 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Fam24aQ8CF27 98 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Wisp2Q9Z0G4 251 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Trav3-4A0A075B654 114 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 MdfiP70331 251 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Lhfpl1Q80SV1 220 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 Plekhb2Q9QZC7 221 aa6.22□□□□□ -1.41
Lig3-201ENSMUST00000021039 E130218I03RikA0A0U1RNU5 63 aa6.21□□□□□ -1.41
Lig3-201ENSMUST00000021039 Samd5Q3V1H9 173 aa6.21□□□□□ -1.41
Lig3-201ENSMUST00000021039 MplkipQ9D011 178 aa6.21□□□□□ -1.41
Lig3-201ENSMUST00000021039 Hist1h2bfP10853 126 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Ang4Q3TMQ6 144 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Lyrm9Q3UN90 78 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Hist1h2bbQ64475 126 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Hist1h2bkQ8CGP1 126 aaKnown RBP6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Hist1h2bpQ8CGP2 126 aaKnown RBP6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Rnf183Q8QZS5 190 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Inafm2A0A1L1STD6 152 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 LtbP41155 306 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Znf740Q6NZQ6 180 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Igkv3-5A0A140T8M6 119 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Rnase1P00683 149 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Spink10Q8CAC8 162 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Mrpl32Q9DCI9 187 aaKnown RBP6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Col6a4A2AX52 2309 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Ighv1-62-3P01754 117 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Fxyd7P59648 80 aa6.21□□□□□ -1.42
Lig3-201ENSMUST00000021039 Igkv4-69A0A0B4J1I6 116 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Reg3gO09049 174 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Sprr3O09116 238 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Hist3h2bbQ8CGP0 126 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Hist3h2baQ9D2U9 126 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 HampQ9EQ21 83 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Trav14d-1A0A075B6B1 121 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Cfc1P97766 202 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 SptssbQ925E8 76 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Polr3kQ9CQZ7 108 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Fxyd1Q9Z239 92 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Cox8bP48772 70 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Zcwpw2Q08EN7 125 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Tln1P26039 2541 aaKnown RBP6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Ighv8-6A0A0A6YXA3 118 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Tm4sf19E9Q9H8 206 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 P01729 129 aa6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Lama2Q60675 3118 aaKnown RBP6.2□□□□□ -1.42
Lig3-201ENSMUST00000021039 Ighv12-3A0A075B5T1 117 aa6.19□□□□□ -1.42
Lig3-201ENSMUST00000021039 P01786 117 aa6.19□□□□□ -1.42
Lig3-201ENSMUST00000021039 Tdgf1P51865 171 aa6.19□□□□□ -1.42
Lig3-201ENSMUST00000021039 Tcl1b4P56844 120 aa6.19□□□□□ -1.42
Lig3-201ENSMUST00000021039 Zic4Q61467 341 aa6.19□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 54.2 ms