RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Q8C708 225 aa10.3□□□□□ -0.76
Traf6-201ENSMUST00000004949 Brd3osA0A1B0GRB6 84 aa10.3□□□□□ -0.76
Traf6-201ENSMUST00000004949 PolP10400 120 aa10.3□□□□□ -0.76
Traf6-201ENSMUST00000004949 Ighv1-52A0A0A6YXC3 117 aa10.3□□□□□ -0.76
Traf6-201ENSMUST00000004949 DdtO35215 118 aa10.3□□□□□ -0.76
Traf6-201ENSMUST00000004949 Vamp8O70404 101 aa10.3□□□□□ -0.76
Traf6-201ENSMUST00000004949 1110002E22RikE0CYV9 1786 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 P01896 185 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 P03985 172 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 Ssbp1Q9CYR0 152 aaKnown RBP10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 Gm5129F6YHA9 99 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 Sdhaf1Q3U276 118 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 Gm3285A0A1W2P7U0 201 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 Tex48Q9DA81 110 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 Ighv8-2A0A0A6YW58 119 aa10.29□□□□□ -0.76
Traf6-201ENSMUST00000004949 Gm9925F6T2U3 160 aa10.28□□□□□ -0.76
Traf6-201ENSMUST00000004949 Trav3n-3A0A0G2JEM0 114 aa10.28□□□□□ -0.76
Traf6-201ENSMUST00000004949 Gm45717A0A1B0GT68 152 aa10.28□□□□□ -0.76
Traf6-201ENSMUST00000004949 Dmrt3Q80WT2 476 aa10.28□□□□□ -0.76
Traf6-201ENSMUST00000004949 Ube2cQ9D1C1 179 aa10.28□□□□□ -0.76
Traf6-201ENSMUST00000004949 Trav9n-2A0A0G2JDP3 113 aa10.27□□□□□ -0.76
Traf6-201ENSMUST00000004949 Igkv3-9A0A140T8P4 119 aa10.27□□□□□ -0.76
Traf6-201ENSMUST00000004949 Hint1P70349 126 aaKnown RBP10.27□□□□□ -0.76
Traf6-201ENSMUST00000004949 P01750 117 aa10.27□□□□□ -0.77
Traf6-201ENSMUST00000004949 Bud31Q6PGH1 103 aa10.27□□□□□ -0.77
Traf6-201ENSMUST00000004949 Card19Q9D1I2 183 aa10.27□□□□□ -0.77
Traf6-201ENSMUST00000004949 Igkv4-57-1A0A075B5M4 119 aa10.27□□□□□ -0.77
Traf6-201ENSMUST00000004949 Gm10188Q3V432 135 aa10.27□□□□□ -0.77
Traf6-201ENSMUST00000004949 Olfr1367Q8VFG2 316 aa10.27□□□□□ -0.77
Traf6-201ENSMUST00000004949 Tnrc6aQ3UHK8 1896 aaKnown RBP10.27□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ighv1-12A0A0A6YXJ9 117 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 H2al1jA2BFR3 109 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 Cited2O35740 269 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 Mrps12O35680 139 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 9130213A22RikQ3V3T2 120 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 Tmem238A9JSM3 176 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 Slc25a48Q8BW66 306 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 Pfn2Q9JJV2 140 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 P01658 132 aa10.26□□□□□ -0.77
Traf6-201ENSMUST00000004949 DscamQ9ERC8 2013 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Gm29423A0A087WRM1 55 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Gm45785A0A1B0GT05 94 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Tac4Q99N14 128 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Bex1Q9R224 128 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Timm10bQ9WV96 100 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Trav9d-3A0A075B695 113 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Shisal2aA2A9G7 189 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 OpalinQ7M750 143 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Gm20481G3UXK4 153 aa10.25□□□□□ -0.77
Traf6-201ENSMUST00000004949 Igkv4-68A0A0B4J1I7 117 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Trbv14A0A140T8L9 115 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Defa1P11477 93 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 DysfQ9ESD7 2090 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Slc25a29Q8BL03 306 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ighv12-3A0A075B5T1 117 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Hoxd3P09027 433 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Igll1P20764 209 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Lmo4P61969 165 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Il22ra2Q80XF5 230 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Srsf2Q62093 221 aaKnown RBP10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Defa28D3Z1V9 94 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 Gm10638F6QEG2 257 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 E030018B13RikJ3QMS9 113 aa10.24□□□□□ -0.77
Traf6-201ENSMUST00000004949 A930003A15RikQ3U552 87 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Dmrtc1c1Q9D410 238 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ighv13-2A0A0A6YWN3 119 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Trav7d-3Q5R1I1 112 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 MturnQ8CGA4 131 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Olfr984Q8VFN1 314 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ighv2-7A0A075B5Q8 116 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ppp1r32Q148A4 427 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Tm2d1Q99MB3 208 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Them7Q9DCP4 223 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Sec11aQ9R0P6 179 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 Adamts20P59511 1906 aa10.23□□□□□ -0.77
Traf6-201ENSMUST00000004949 C730034F03RikQ8BGL5 111 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Igkv2-137A0A0B4J1H6 120 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 P04943 107 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Crip1P63254 77 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Znf664Q4VA44 261 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Trbv13-1A0A0B4J1P8 112 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 1500009C09RikD3YYW9 81 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Dand5Q76LW6 185 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Bub3Q9WVA3 326 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ighv1-77A0A0G2JGS9 117 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ndufa4Q62425 82 aaKnown RBP10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 E130116L18RikQ8BMV6 101 aa10.22□□□□□ -0.77
Traf6-201ENSMUST00000004949 E130218I03RikA0A0U1RNU5 63 aa10.21□□□□□ -0.77
Traf6-201ENSMUST00000004949 Sorl1O88307 2215 aaKnown RBP10.21□□□□□ -0.77
Traf6-201ENSMUST00000004949 Cox8bP48772 70 aa10.21□□□□□ -0.77
Traf6-201ENSMUST00000004949 Gm5941Q497P9 117 aa10.21□□□□□ -0.77
Traf6-201ENSMUST00000004949 Gm15294V9GXA7 121 aa10.21□□□□□ -0.77
Traf6-201ENSMUST00000004949 Trav14n-2A0A0G2JDF5 121 aa10.21□□□□□ -0.77
Traf6-201ENSMUST00000004949 Olfr311Q5NC59 308 aa10.21□□□□□ -0.77
Traf6-201ENSMUST00000004949 Ighv1-23A0A0A6YVW3 117 aa10.21□□□□□ -0.78
Traf6-201ENSMUST00000004949 Ndufs7Q9DC70 224 aa10.21□□□□□ -0.78
Traf6-201ENSMUST00000004949 Lyrm9Q3UN90 78 aa10.21□□□□□ -0.78
Traf6-201ENSMUST00000004949 AgrnA2ASQ1 1950 aa10.21□□□□□ -0.78
Traf6-201ENSMUST00000004949 Tln1P26039 2541 aaKnown RBP10.21□□□□□ -0.78
Traf6-201ENSMUST00000004949 Trav14-3A0A075B607 120 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 80.8 ms