RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 P01630 113 aa11.13□□□□□ -0.63
Col1a1-201ENSMUST00000001547 9930022D16RikQ8BG27 128 aa11.13□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Rasl10aQ8K5A4 203 aa11.13□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Ncor1Q60974 2453 aa11.12□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Dad1P61804 113 aa11.12□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Lect2O88803 151 aa11.12□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Q8C708 225 aa11.12□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm6034E9Q101 117 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm19684G3UZ45 117 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Fam208bQ5DTT3 2382 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Igkv8-34A0A0G2JDU0 121 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Trav9d-4A0A0G2JG37 103 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm10188Q3V432 135 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm26558Q8BLW8 286 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm7257D3YX25 99 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm20379A0A087WR34 119 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 MsmpB1AWI6 139 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Tmem243B2RVB9 118 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Wipf2Q6PEV3 440 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Tmem210Q9D2F0 147 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Zfp407G3UVV3 2246 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 PoleQ9WVF7 2283 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Tnfrsf13bQ9ET35 249 aa11.11□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm17677B3GLJ5 116 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 4933414I15RikQ9D4D5 133 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Il22ra2Q80XF5 230 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 P04940 107 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 P04941 107 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Pygo2Q80V76 405 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Ss18l2Q9D174 77 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Tnrc6aQ3UHK8 1896 aaKnown RBP11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Ang5Q5GAN1 145 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Morn5Q9DAI9 170 aa11.1□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Col6a6Q8C6K9 2265 aa11.09□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Gm815Q3UWS2 115 aa11.09□□□□□ -0.63
Col1a1-201ENSMUST00000001547 4930442H23RikQ9D5G7 103 aa11.09□□□□□ -0.63
Col1a1-201ENSMUST00000001547 PpbpQ9EQI5 113 aa11.09□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Nckap5E9QAE1 1909 aa11.09□□□□□ -0.63
Col1a1-201ENSMUST00000001547 4930546C10RikE9Q4Y3 121 aa11.09□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Lage3Q9CR70 148 aa11.09□□□□□ -0.63
Col1a1-201ENSMUST00000001547 Sdhaf1Q3U276 118 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ndufs7Q9DC70 224 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Trav14n-2A0A0G2JDF5 121 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Tal2Q62282 108 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Defb29Q8BGW9 78 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Trip12G5E870 2025 aaKnown RBP11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ighv1-74A0A0G2JGK2 117 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ncor2Q9WU42 2472 aaKnown RBP11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Gm5129F6YHA9 99 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ndufa4Q62425 82 aaKnown RBP11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Gm9961Q8BNV2 113 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ighv1-4A0A075B5T4 117 aa11.08□□□□□ -0.64
Col1a1-201ENSMUST00000001547 P01738 130 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Igll1P20764 209 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ighv5-9-1A0A0A6YVS4 126 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 P01786 117 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Smim10l1A0A087WNQ7 89 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Spink8Q09TK9 105 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 CstadQ9D245 104 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Slc25a48Q8BW66 306 aa11.07□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Col5a3Q9JLI2 1739 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ighv6-7A0A0A6YWU3 119 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 A930003A15RikQ3U552 87 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Plxnb1Q8CJH3 2119 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Them7Q9DCP4 223 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Trav14-2A0A075B694 121 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 SvipQ3UZP4 77 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 4930415O20RikQ8CDT5 131 aa11.06□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Clec4b2Q67DU8 208 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Gm17324Q8C6J8 137 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Synj2bpQ9D6K5 145 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Rmi2Q3UPE3 149 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Fam110dQ80X91 271 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 March3Q8BRX9 218 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Prp2P05143 317 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Col4a6B1AVK5 1691 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Tmem263Q9DAM7 115 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Qrich2A0A140LIY9 2337 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 P01793 123 aa11.05□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Col24a1Q30D77 1733 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Igkv2-137A0A0B4J1H6 120 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Gm15091B1AZM2 449 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Gm20708H3BKF4 155 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 P04942 107 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Olfr312Q7TRZ9 308 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Mustn1Q99JI1 82 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Spata25Q9DA57 226 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Trav14-3A0A075B607 120 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Trav4n-4A0A075B615 110 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Reg3gO09049 174 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ndufa12Q7TMF3 145 aaKnown RBP11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Cysrt1Q9D1E4 142 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Hrct1Q9D6B9 109 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Jmjd1cQ69ZK6 2350 aa11.04□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ighv1-64A0A075B5X3 117 aa11.03□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ighv1-23A0A0A6YVW3 117 aa11.03□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Gm21994F6T2D2 329 aa11.03□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Ucn2Q99ML8 113 aa11.03□□□□□ -0.64
Col1a1-201ENSMUST00000001547 Plscr4P58196 326 aa11.03□□□□□ -0.64
Col1a1-201ENSMUST00000001547 P01794 123 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 136 ms