RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 MP68P56378 58 aa5.16□□□□□ -1.58
CLK3-217ENST00000566126 SCGB1A1P11684 91 aa5.12□□□□□ -1.59
CLK3-217ENST00000566126 TRAV7A0A075B6U4 112 aa5.1□□□□□ -1.59
CLK3-217ENST00000566126 SMIM20Q8N5G0 67 aa5.09□□□□□ -1.59
CLK3-217ENST00000566126 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
CLK3-217ENST00000566126 SPTSSBQ8NFR3 76 aa5.01□□□□□ -1.61
CLK3-217ENST00000566126 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
CLK3-217ENST00000566126 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
CLK3-217ENST00000566126 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
CLK3-217ENST00000566126 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
CLK3-217ENST00000566126 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
CLK3-217ENST00000566126 ACYP2P14621 99 aa4.92□□□□□ -1.62
CLK3-217ENST00000566126 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
CLK3-217ENST00000566126 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
CLK3-217ENST00000566126 SNURFQ9Y675 71 aa4.89□□□□□ -1.63
CLK3-217ENST00000566126 MT1AP04731 61 aa4.88□□□□□ -1.63
CLK3-217ENST00000566126 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
CLK3-217ENST00000566126 TNP1P09430 55 aa4.84□□□□□ -1.63
CLK3-217ENST00000566126 COX7CP15954 63 aa4.83□□□□□ -1.64
CLK3-217ENST00000566126 CHKB-CPT1BH3BT56 60 aa4.8□□□□□ -1.64
CLK3-217ENST00000566126 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
CLK3-217ENST00000566126 H7BZZ5 65 aa4.74□□□□□ -1.65
CLK3-217ENST00000566126 COA5Q86WW8 74 aa4.7□□□□□ -1.66
CLK3-217ENST00000566126 ANAPC13Q9BS18 74 aa4.7□□□□□ -1.66
CLK3-217ENST00000566126 CCDC179H3BU77 68 aa4.6□□□□□ -1.67
CLK3-217ENST00000566126 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
CLK3-217ENST00000566126 SEC61GP60059 68 aa4.54□□□□□ -1.68
CLK3-217ENST00000566126 SERP1Q9Y6X1 66 aa4.53□□□□□ -1.68
CLK3-217ENST00000566126 A0A1B0GU33 70 aa4.51□□□□□ -1.69
CLK3-217ENST00000566126 MT3P25713 68 aa4.49□□□□□ -1.69
CLK3-217ENST00000566126 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
CLK3-217ENST00000566126 TMEM258P61165 79 aa4.48□□□□□ -1.69
CLK3-217ENST00000566126 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
CLK3-217ENST00000566126 A0A1B0GU69 56 aa4.44□□□□□ -1.7
CLK3-217ENST00000566126 A8MU10 97 aa4.42□□□□□ -1.7
CLK3-217ENST00000566126 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
CLK3-217ENST00000566126 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
CLK3-217ENST00000566126 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
CLK3-217ENST00000566126 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
CLK3-217ENST00000566126 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
CLK3-217ENST00000566126 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CLK3-217ENST00000566126 H3BS24 57 aa4.28□□□□□ -1.72
CLK3-217ENST00000566126 UQCR11O14957 56 aa4.23□□□□□ -1.73
CLK3-217ENST00000566126 V9GYY9 64 aa4.22□□□□□ -1.73
CLK3-217ENST00000566126 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
CLK3-217ENST00000566126 Q1T7F1 81 aa4.19□□□□□ -1.74
CLK3-217ENST00000566126 PCP4P48539 62 aa4.15□□□□□ -1.75
CLK3-217ENST00000566126 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
CLK3-217ENST00000566126 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
CLK3-217ENST00000566126 PSPHP1O15172 72 aa4.1□□□□□ -1.75
CLK3-217ENST00000566126 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
CLK3-217ENST00000566126 K7ERS5 55 aa4.02□□□□□ -1.77
CLK3-217ENST00000566126 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
CLK3-217ENST00000566126 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
CLK3-217ENST00000566126 A6NED7 52 aa3.99□□□□□ -1.77
CLK3-217ENST00000566126 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
CLK3-217ENST00000566126 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
CLK3-217ENST00000566126 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
CLK3-217ENST00000566126 ROMO1P60602 79 aa3.79□□□□□ -1.8
CLK3-217ENST00000566126 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
CLK3-217ENST00000566126 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
CLK3-217ENST00000566126 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
CLK3-217ENST00000566126 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
CLK3-217ENST00000566126 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
CLK3-217ENST00000566126 SVIPQ8NHG7 77 aa3.26□□□□□ -1.89
CLK3-217ENST00000566126 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
CLK3-217ENST00000566126 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
CLK3-217ENST00000566126 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CLK3-217ENST00000566126 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
CLK3-217ENST00000566126 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
CLK3-217ENST00000566126 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
CLK3-217ENST00000566126 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
CLK3-217ENST00000566126 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CLK3-217ENST00000566126 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
CLK3-217ENST00000566126 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
CLK3-217ENST00000566126 A0A0A0MQY5 61 aa2.09□□□□□ -2.07
CLK3-217ENST00000566126 PRM1P04553 51 aa1.92□□□□□ -2.1
CLK3-217ENST00000566126 INE1O15225 51 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms