RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 SMIM2Q9BVW6 85 aa-1.53□□□□□ -2.65
LINC00871-202ENST00000556071 NRXN3Q9Y4C0 1643 aa-1.53□□□□□ -2.65
LINC00871-202ENST00000556071 ABCA5Q8WWZ7 1642 aa-1.54□□□□□ -2.66
LINC00871-202ENST00000556071 PDCD5O14737 125 aa-1.54□□□□□ -2.66
LINC00871-202ENST00000556071 TTTY10Q9BZA0 68 aa-1.54□□□□□ -2.66
LINC00871-202ENST00000556071 MKI67P46013 3256 aaKnown RBP-1.55□□□□□ -2.66
LINC00871-202ENST00000556071 TFF3Q07654 80 aa-1.56□□□□□ -2.66
LINC00871-202ENST00000556071 SMCO4Q9NRQ5 59 aa-1.56□□□□□ -2.66
LINC00871-202ENST00000556071 XIRP2A4UGR9 3374 aa-1.56□□□□□ -2.66
LINC00871-202ENST00000556071 ABCA10Q8WWZ4 1543 aa-1.56□□□□□ -2.66
LINC00871-202ENST00000556071 PRXQ9BXM0 1461 aa-1.56□□□□□ -2.66
LINC00871-202ENST00000556071 EFCAB5A4FU69 1503 aa-1.57□□□□□ -2.66
LINC00871-202ENST00000556071 DNAH14Q0VDD8 3507 aa-1.57□□□□□ -2.66
LINC00871-202ENST00000556071 LINC01590Q5TEZ4 76 aa-1.58□□□□□ -2.66
LINC00871-202ENST00000556071 RHPN1-AS1Q9BWJ2 59 aa-1.58□□□□□ -2.66
LINC00871-202ENST00000556071 CFAP47Q6ZTR5 3102 aa-1.58□□□□□ -2.66
LINC00871-202ENST00000556071 CLTCL1P53675 1640 aa-1.58□□□□□ -2.66
LINC00871-202ENST00000556071 UNC80Q8N2C7 3258 aa-1.59□□□□□ -2.66
LINC00871-202ENST00000556071 CPS1P31327 1500 aa-1.59□□□□□ -2.66
LINC00871-202ENST00000556071 DEFB133Q30KQ1 61 aa-1.59□□□□□ -2.66
LINC00871-202ENST00000556071 A0A087WWC5 75 aa-1.6□□□□□ -2.67
LINC00871-202ENST00000556071 CD52P31358 61 aa-1.61□□□□□ -2.67
LINC00871-202ENST00000556071 LOC400499M0QZD8 3231 aa-1.61□□□□□ -2.67
LINC00871-202ENST00000556071 USP34Q70CQ2 3546 aa-1.61□□□□□ -2.67
LINC00871-202ENST00000556071 DNAH12Q6ZR08 3092 aa-1.62□□□□□ -2.67
LINC00871-202ENST00000556071 NDUFA1O15239 70 aa-1.63□□□□□ -2.67
LINC00871-202ENST00000556071 ADCY10Q96PN6 1610 aa-1.63□□□□□ -2.67
LINC00871-202ENST00000556071 NFAT5O94916 1531 aa-1.64□□□□□ -2.67
LINC00871-202ENST00000556071 CENPFP49454 3210 aa-1.65□□□□□ -2.67
LINC00871-202ENST00000556071 VCANP13611 3396 aa-1.65□□□□□ -2.67
LINC00871-202ENST00000556071 FANCD2Q9BXW9 1451 aa-1.65□□□□□ -2.67
LINC00871-202ENST00000556071 DDX60Q8IY21 1712 aaKnown RBP-1.66□□□□□ -2.67
LINC00871-202ENST00000556071 IQGAP1P46940 1657 aa-1.66□□□□□ -2.68
LINC00871-202ENST00000556071 CMC2Q9NRP2 79 aa-1.67□□□□□ -2.68
LINC00871-202ENST00000556071 ABCC8Q09428 1581 aa-1.68□□□□□ -2.68
LINC00871-202ENST00000556071 SMIM5Q71RC9 77 aa-1.68□□□□□ -2.68
LINC00871-202ENST00000556071 DEFB124Q8NES8 71 aa-1.68□□□□□ -2.68
LINC00871-202ENST00000556071 TOMM7Q9P0U1 55 aa-1.68□□□□□ -2.68
LINC00871-202ENST00000556071 ASPMQ8IZT6 3477 aa-1.68□□□□□ -2.68
LINC00871-202ENST00000556071 HTN1P15515 57 aa-1.7□□□□□ -2.68
LINC00871-202ENST00000556071 BRCA2P51587 3418 aa-1.7□□□□□ -2.68
LINC00871-202ENST00000556071 A0A096LNI7 61 aa-1.73□□□□□ -2.69
LINC00871-202ENST00000556071 DUOX1Q9NRD9 1551 aa-1.73□□□□□ -2.69
LINC00871-202ENST00000556071 SAMD9LQ8IVG5 1584 aa-1.74□□□□□ -2.69
LINC00871-202ENST00000556071 CDH23Q9H251 3354 aa-1.75□□□□□ -2.69
LINC00871-202ENST00000556071 TOP2AP11388 1531 aaKnown RBP-1.79□□□□□ -2.7
LINC00871-202ENST00000556071 ERICH3Q5RHP9 1530 aa-1.81□□□□□ -2.7
LINC00871-202ENST00000556071 VPS13AQ96RL7 3174 aa-1.81□□□□□ -2.7
LINC00871-202ENST00000556071 RPL39P62891 51 aaKnown RBP-1.82□□□□□ -2.7
LINC00871-202ENST00000556071 H3BUX3 64 aa-1.83□□□□□ -2.7
LINC00871-202ENST00000556071 ATP7AQ04656 1500 aa-1.86□□□□□ -2.71
LINC00871-202ENST00000556071 LINC01556Q5JQF7 62 aa-1.87□□□□□ -2.71
LINC00871-202ENST00000556071 MROH2BQ7Z745 1585 aa-1.87□□□□□ -2.71
LINC00871-202ENST00000556071 RPL39LQ96EH5 51 aaKnown RBP-1.89□□□□□ -2.71
LINC00871-202ENST00000556071 SMIM31A0A1B0GVY4 71 aa-1.92□□□□□ -2.72
LINC00871-202ENST00000556071 SNRPGP15A8MWD9 76 aa-1.92□□□□□ -2.72
LINC00871-202ENST00000556071 UTRNP46939 3433 aa-1.96□□□□□ -2.72
LINC00871-202ENST00000556071 DEFB104AQ8WTQ1 72 aa-1.96□□□□□ -2.72
LINC00871-202ENST00000556071 K7EIM0 57 aa-1.99□□□□□ -2.73
LINC00871-202ENST00000556071 IQGAP2Q13576 1575 aa-1.99□□□□□ -2.73
LINC00871-202ENST00000556071 A0A096LPF7 62 aa-2.06□□□□□ -2.74
LINC00871-202ENST00000556071 TOMM5Q8N4H5 51 aa-2.07□□□□□ -2.74
LINC00871-202ENST00000556071 APELAP0DMC3 54 aa-2.1□□□□□ -2.75
LINC00871-202ENST00000556071 PRCDQ00LT1 54 aa-2.1□□□□□ -2.75
LINC00871-202ENST00000556071 ARHGAP5-AS1Q96IT6 56 aa-2.1□□□□□ -2.75
LINC00871-202ENST00000556071 TMEM167AQ8TBQ9 72 aa-2.14□□□□□ -2.75
LINC00871-202ENST00000556071 Q9Y3F1 56 aa-2.15□□□□□ -2.75
LINC00871-202ENST00000556071 GOLGB1Q14789 3259 aaKnown RBP-2.2□□□□□ -2.76
LINC00871-202ENST00000556071 HTN3P15516 51 aa-2.21□□□□□ -2.76
LINC00871-202ENST00000556071 SNRPGP62308 76 aaKnown RBP-2.26□□□□□ -2.77
LINC00871-202ENST00000556071 GCC2Q8IWJ2 1684 aa-2.28□□□□□ -2.77
LINC00871-202ENST00000556071 RPL39P5Q59GN2 51 aa-2.32□□□□□ -2.78
LINC00871-202ENST00000556071 COX14Q96I36 57 aa-2.33□□□□□ -2.78
LINC00871-202ENST00000556071 DEFB108AA8MXU0 73 aa-2.37□□□□□ -2.79
LINC00871-202ENST00000556071 H3BSH0 61 aa-2.38□□□□□ -2.79
LINC00871-202ENST00000556071 DEFB108BQ8NET1 73 aa-2.52□□□□□ -2.81
LINC00871-202ENST00000556071 STATHP02808 62 aa-2.73□□□□□ -2.85
Retrieved 77 of 20,778 RNA–protein pairs in 8 ms