RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 DNAH14Q0VDD8 3507 aa-1.85□□□□□ -2.71
SRP54-207ENST00000555535 CFAP47Q6ZTR5 3102 aa-1.85□□□□□ -2.71
SRP54-207ENST00000555535 CEP250Q9BV73 2442 aa-1.86□□□□□ -2.71
SRP54-207ENST00000555535 CPS1P31327 1500 aa-1.86□□□□□ -2.71
SRP54-207ENST00000555535 EFCAB5A4FU69 1503 aa-1.87□□□□□ -2.71
SRP54-207ENST00000555535 NRXN3Q9Y4C0 1643 aa-1.88□□□□□ -2.71
SRP54-207ENST00000555535 CLTCL1P53675 1640 aa-1.89□□□□□ -2.71
SRP54-207ENST00000555535 SCRIBQ14160 1630 aa-1.89□□□□□ -2.71
SRP54-207ENST00000555535 AGLP35573 1532 aa-1.91□□□□□ -2.71
SRP54-207ENST00000555535 ABCA10Q8WWZ4 1543 aa-1.91□□□□□ -2.71
SRP54-207ENST00000555535 PLNP26678 52 aa-1.91□□□□□ -2.72
SRP54-207ENST00000555535 IQGAP1P46940 1657 aa-1.92□□□□□ -2.72
SRP54-207ENST00000555535 USP34Q70CQ2 3546 aa-1.93□□□□□ -2.72
SRP54-207ENST00000555535 ABCA5Q8WWZ7 1642 aa-1.94□□□□□ -2.72
SRP54-207ENST00000555535 SMIM2Q9BVW6 85 aa-1.95□□□□□ -2.72
SRP54-207ENST00000555535 A0A087WWC5 75 aa-1.99□□□□□ -2.73
SRP54-207ENST00000555535 DNAH12Q6ZR08 3092 aa-1.99□□□□□ -2.73
SRP54-207ENST00000555535 NFAT5O94916 1531 aa-2□□□□□ -2.73
SRP54-207ENST00000555535 TTTY10Q9BZA0 68 aa-2□□□□□ -2.73
SRP54-207ENST00000555535 PRXQ9BXM0 1461 aa-2.01□□□□□ -2.73
SRP54-207ENST00000555535 LOC400499M0QZD8 3231 aa-2.02□□□□□ -2.73
SRP54-207ENST00000555535 SMIM5Q71RC9 77 aa-2.03□□□□□ -2.73
SRP54-207ENST00000555535 TRPM2O94759 1503 aa-2.03□□□□□ -2.73
SRP54-207ENST00000555535 UNC80Q8N2C7 3258 aa-2.03□□□□□ -2.73
SRP54-207ENST00000555535 VCANP13611 3396 aa-2.06□□□□□ -2.74
SRP54-207ENST00000555535 ABCC8Q09428 1581 aa-2.08□□□□□ -2.74
SRP54-207ENST00000555535 TOMM7Q9P0U1 55 aa-2.09□□□□□ -2.74
SRP54-207ENST00000555535 NDUFA1O15239 70 aa-2.11□□□□□ -2.75
SRP54-207ENST00000555535 ADCY10Q96PN6 1610 aa-2.11□□□□□ -2.75
SRP54-207ENST00000555535 ASPMQ8IZT6 3477 aa-2.11□□□□□ -2.75
SRP54-207ENST00000555535 DEFB133Q30KQ1 61 aa-2.12□□□□□ -2.75
SRP54-207ENST00000555535 CENPFP49454 3210 aa-2.13□□□□□ -2.75
SRP54-207ENST00000555535 RHPN1-AS1Q9BWJ2 59 aa-2.13□□□□□ -2.75
SRP54-207ENST00000555535 FANCD2Q9BXW9 1451 aa-2.14□□□□□ -2.75
SRP54-207ENST00000555535 HTN1P15515 57 aa-2.15□□□□□ -2.75
SRP54-207ENST00000555535 CMC2Q9NRP2 79 aa-2.15□□□□□ -2.75
SRP54-207ENST00000555535 A0A096LNI7 61 aa-2.16□□□□□ -2.76
SRP54-207ENST00000555535 LINC01590Q5TEZ4 76 aa-2.17□□□□□ -2.76
SRP54-207ENST00000555535 CDH23Q9H251 3354 aa-2.18□□□□□ -2.76
SRP54-207ENST00000555535 XIRP2A4UGR9 3374 aa-2.19□□□□□ -2.76
SRP54-207ENST00000555535 BRCA2P51587 3418 aa-2.21□□□□□ -2.76
SRP54-207ENST00000555535 ERICH3Q5RHP9 1530 aa-2.22□□□□□ -2.76
SRP54-207ENST00000555535 VPS13AQ96RL7 3174 aa-2.24□□□□□ -2.77
SRP54-207ENST00000555535 CD52P31358 61 aa-2.25□□□□□ -2.77
SRP54-207ENST00000555535 DUOX1Q9NRD9 1551 aa-2.27□□□□□ -2.77
SRP54-207ENST00000555535 KRTAP19-2Q3LHN2 52 aa-2.27□□□□□ -2.77
SRP54-207ENST00000555535 RPL39P62891 51 aaKnown RBP-2.32□□□□□ -2.78
SRP54-207ENST00000555535 SMIM31A0A1B0GVY4 71 aa-2.37□□□□□ -2.79
SRP54-207ENST00000555535 SAMD9LQ8IVG5 1584 aa-2.37□□□□□ -2.79
SRP54-207ENST00000555535 DEFB124Q8NES8 71 aa-2.39□□□□□ -2.79
SRP54-207ENST00000555535 TOP2AP11388 1531 aaKnown RBP-2.39□□□□□ -2.79
SRP54-207ENST00000555535 RPL39LQ96EH5 51 aaKnown RBP-2.41□□□□□ -2.8
SRP54-207ENST00000555535 UTRNP46939 3433 aa-2.41□□□□□ -2.8
SRP54-207ENST00000555535 DEFB104AQ8WTQ1 72 aa-2.43□□□□□ -2.8
SRP54-207ENST00000555535 ATP7AQ04656 1500 aa-2.45□□□□□ -2.8
SRP54-207ENST00000555535 MROH2BQ7Z745 1585 aa-2.45□□□□□ -2.8
SRP54-207ENST00000555535 SNRPGP15A8MWD9 76 aa-2.5□□□□□ -2.81
SRP54-207ENST00000555535 IQGAP2Q13576 1575 aa-2.5□□□□□ -2.81
SRP54-207ENST00000555535 LINC01556Q5JQF7 62 aa-2.52□□□□□ -2.81
SRP54-207ENST00000555535 TOMM5Q8N4H5 51 aa-2.61□□□□□ -2.83
SRP54-207ENST00000555535 GOLGB1Q14789 3259 aaKnown RBP-2.62□□□□□ -2.83
SRP54-207ENST00000555535 H3BUX3 64 aa-2.64□□□□□ -2.83
SRP54-207ENST00000555535 APELAP0DMC3 54 aa-2.74□□□□□ -2.85
SRP54-207ENST00000555535 A0A096LPF7 62 aa-2.78□□□□□ -2.85
SRP54-207ENST00000555535 K7EIM0 57 aa-2.79□□□□□ -2.86
SRP54-207ENST00000555535 ARHGAP5-AS1Q96IT6 56 aa-2.84□□□□□ -2.86
SRP54-207ENST00000555535 PRCDQ00LT1 54 aa-2.88□□□□□ -2.87
SRP54-207ENST00000555535 GCC2Q8IWJ2 1684 aa-2.9□□□□□ -2.87
SRP54-207ENST00000555535 HTN3P15516 51 aa-2.93□□□□□ -2.88
SRP54-207ENST00000555535 TMEM167AQ8TBQ9 72 aa-2.93□□□□□ -2.88
SRP54-207ENST00000555535 SNRPGP62308 76 aaKnown RBP-3.09□□□□□ -2.9
SRP54-207ENST00000555535 RPL39P5Q59GN2 51 aa-3.13□□□□□ -2.91
SRP54-207ENST00000555535 H3BSH0 61 aa-3.15□□□□□ -2.91
SRP54-207ENST00000555535 DEFB108AA8MXU0 73 aa-3.16□□□□□ -2.92
SRP54-207ENST00000555535 Q9Y3F1 56 aa-3.23□□□□□ -2.93
SRP54-207ENST00000555535 COX14Q96I36 57 aa-3.43□□□□□ -2.96
SRP54-207ENST00000555535 DEFB108BQ8NET1 73 aa-3.46□□□□□ -2.96
SRP54-207ENST00000555535 STATHP02808 62 aa-3.67□□□□□ -3
Retrieved 78 of 20,778 RNA–protein pairs in 84.9 ms