RNA–Protein interactions for RNA: ENST00000528869.1

CD44-AS1-201, CD44 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene CD44-AS1, Length 587 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-AS1-201ENST00000528869 DNAH2Q9P225 4427 aa0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 MT1AP04731 61 aa0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 MT1MQ8N339 61 aa0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 DNAH8Q96JB1 4490 aa0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 DNAH1Q9P2D7 4330 aa0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 CSMD3Q7Z407 3707 aa0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 DNAH17Q9UFH2 4485 aa0.25□□□□□ -2.37
CD44-AS1-201ENST00000528869 TRRAPQ9Y4A5 3859 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 DNAH10Q8IVF4 4471 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 DNAH9Q9NYC9 4486 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 VPS13DQ5THJ4 4388 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 KRTAP6-1Q3LI64 71 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 KRTAP6-2Q3LI66 62 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 SPRR2FQ96RM1 72 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 LRP1BQ9NZR2 4599 aa0.24□□□□□ -2.37
CD44-AS1-201ENST00000528869 DYNC2H1Q8NCM8 4307 aaKnown RBP0.23□□□□□ -2.37
CD44-AS1-201ENST00000528869 FAT2Q9NYQ8 4349 aa0.23□□□□□ -2.37
CD44-AS1-201ENST00000528869 AKAP9Q99996 3911 aa0.23□□□□□ -2.37
CD44-AS1-201ENST00000528869 PRKDCP78527 4128 aaKnown RBP0.22□□□□□ -2.37
CD44-AS1-201ENST00000528869 ANK2Q01484 3957 aa0.22□□□□□ -2.37
CD44-AS1-201ENST00000528869 KRTAP19-6Q3LI70 58 aa0.22□□□□□ -2.37
CD44-AS1-201ENST00000528869 PKHD1P08F94 4074 aa0.22□□□□□ -2.37
CD44-AS1-201ENST00000528869 DNAH3Q8TD57 4116 aa0.21□□□□□ -2.38
CD44-AS1-201ENST00000528869 SPRR2AP35326 72 aa0.21□□□□□ -2.38
CD44-AS1-201ENST00000528869 CMYA5Q8N3K9 4069 aa0.21□□□□□ -2.38
CD44-AS1-201ENST00000528869 DNAH11Q96DT5 4516 aa0.21□□□□□ -2.38
CD44-AS1-201ENST00000528869 HSPG2P98160 4391 aa0.21□□□□□ -2.38
CD44-AS1-201ENST00000528869 PKHD1L1Q86WI1 4243 aa0.21□□□□□ -2.38
CD44-AS1-201ENST00000528869 PKD1P98161 4303 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 TNXBP22105 4242 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 FAT1Q14517 4588 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 SPRR2EP22531 72 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 SPRR2DP22532 72 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 SPRR2BP35325 72 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 DNAH7Q8WXX0 4024 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 DNAH6Q9C0G6 4158 aa0.2□□□□□ -2.38
CD44-AS1-201ENST00000528869 LRP2P98164 4655 aa0.19□□□□□ -2.38
CD44-AS1-201ENST00000528869 SACSQ9NZJ4 4579 aa0.19□□□□□ -2.38
CD44-AS1-201ENST00000528869 VPS13BQ7Z7G8 4022 aa0.19□□□□□ -2.38
CD44-AS1-201ENST00000528869 LPAP08519 4548 aa0.19□□□□□ -2.38
CD44-AS1-201ENST00000528869 DYNC1H1Q14204 4646 aaKnown RBP0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 LYSTQ99698 3801 aa0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 MYCBP2O75592 4640 aa0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 FAT3Q8TDW7 4589 aa0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 KMT2AQ03164 3969 aa0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 HECTD4Q9Y4D8 3996 aa0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 HMCN2Q8NDA2 5059 aa0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 KIAA1109Q2LD37 5005 aa0.18□□□□□ -2.38
CD44-AS1-201ENST00000528869 MUC17Q685J3 4493 aa0.17□□□□□ -2.38
CD44-AS1-201ENST00000528869 APOBP04114 4563 aaKnown RBP0.17□□□□□ -2.38
CD44-AS1-201ENST00000528869 MUC2Q02817 5179 aa0.17□□□□□ -2.38
CD44-AS1-201ENST00000528869 DNAH5Q8TE73 4624 aa0.16□□□□□ -2.38
CD44-AS1-201ENST00000528869 KRTAP20-2Q3LI61 65 aa0.16□□□□□ -2.38
CD44-AS1-201ENST00000528869 RYR1P21817 5038 aa0.15□□□□□ -2.38
CD44-AS1-201ENST00000528869 FLGP20930 4061 aaPredicted RBP0.15□□□□□ -2.38
CD44-AS1-201ENST00000528869 MT4P47944 62 aa0.15□□□□□ -2.39
CD44-AS1-201ENST00000528869 DNHD1Q96M86 4753 aa0.15□□□□□ -2.39
CD44-AS1-201ENST00000528869 PLECQ15149 4684 aaKnown RBP0.15□□□□□ -2.39
CD44-AS1-201ENST00000528869 HERC1Q15751 4861 aa0.14□□□□□ -2.39
CD44-AS1-201ENST00000528869 DSTQ03001 7570 aaKnown RBP0.14□□□□□ -2.39
CD44-AS1-201ENST00000528869 HYDINQ4G0P3 5121 aa0.14□□□□□ -2.39
CD44-AS1-201ENST00000528869 RYR2Q92736 4967 aa0.14□□□□□ -2.39
CD44-AS1-201ENST00000528869 PCLOQ9Y6V0 5065 aa0.13□□□□□ -2.39
CD44-AS1-201ENST00000528869 KRTAP20-1Q3LI63 56 aa0.13□□□□□ -2.39
CD44-AS1-201ENST00000528869 RYR3Q15413 4870 aa0.13□□□□□ -2.39
CD44-AS1-201ENST00000528869 KMT2CQ8NEZ4 4911 aaKnown RBP0.13□□□□□ -2.39
CD44-AS1-201ENST00000528869 HERC2O95714 4834 aa0.12□□□□□ -2.39
CD44-AS1-201ENST00000528869 ABCA13Q86UQ4 5058 aa0.12□□□□□ -2.39
CD44-AS1-201ENST00000528869 BIRC6Q9NR09 4857 aa0.12□□□□□ -2.39
CD44-AS1-201ENST00000528869 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
CD44-AS1-201ENST00000528869 UBR4Q5T4S7 5183 aa0.11□□□□□ -2.39
CD44-AS1-201ENST00000528869 EPPK1P58107 5090 aaKnown RBP0.1□□□□□ -2.39
CD44-AS1-201ENST00000528869 USH2AO75445 5202 aa0.08□□□□□ -2.4
CD44-AS1-201ENST00000528869 RNF213Q63HN8 5207 aa0.07□□□□□ -2.4
CD44-AS1-201ENST00000528869 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
CD44-AS1-201ENST00000528869 NEBP20929 6669 aa0.02□□□□□ -2.41
Retrieved 77 of 20,778 RNA–protein pairs in 53.5 ms