RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
AC004540.1-204ENST00000449537 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
AC004540.1-204ENST00000449537 A8MU10 97 aa4.94□□□□□ -1.62
AC004540.1-204ENST00000449537 LINC01554Q52M75 96 aa4.92□□□□□ -1.62
AC004540.1-204ENST00000449537 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
AC004540.1-204ENST00000449537 PMAIP1Q13794 54 aa4.91□□□□□ -1.62
AC004540.1-204ENST00000449537 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
AC004540.1-204ENST00000449537 SPINT4Q6UDR6 99 aa4.87□□□□□ -1.63
AC004540.1-204ENST00000449537 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
AC004540.1-204ENST00000449537 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
AC004540.1-204ENST00000449537 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
AC004540.1-204ENST00000449537 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
AC004540.1-204ENST00000449537 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
AC004540.1-204ENST00000449537 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
AC004540.1-204ENST00000449537 ROMO1P60602 79 aa4.72□□□□□ -1.65
AC004540.1-204ENST00000449537 MT1EP04732 61 aa4.68□□□□□ -1.66
AC004540.1-204ENST00000449537 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
AC004540.1-204ENST00000449537 MT1GP13640 62 aa4.64□□□□□ -1.67
AC004540.1-204ENST00000449537 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
AC004540.1-204ENST00000449537 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
AC004540.1-204ENST00000449537 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
AC004540.1-204ENST00000449537 TNP1P09430 55 aa4.53□□□□□ -1.68
AC004540.1-204ENST00000449537 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
AC004540.1-204ENST00000449537 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
AC004540.1-204ENST00000449537 MT1MQ8N339 61 aa4.51□□□□□ -1.69
AC004540.1-204ENST00000449537 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
AC004540.1-204ENST00000449537 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
AC004540.1-204ENST00000449537 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
AC004540.1-204ENST00000449537 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
AC004540.1-204ENST00000449537 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
AC004540.1-204ENST00000449537 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
AC004540.1-204ENST00000449537 MT1LQ93083 61 aa4.35□□□□□ -1.71
AC004540.1-204ENST00000449537 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
AC004540.1-204ENST00000449537 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
AC004540.1-204ENST00000449537 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
AC004540.1-204ENST00000449537 H3BS24 57 aa4.27□□□□□ -1.73
AC004540.1-204ENST00000449537 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
AC004540.1-204ENST00000449537 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
AC004540.1-204ENST00000449537 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
AC004540.1-204ENST00000449537 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
AC004540.1-204ENST00000449537 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
AC004540.1-204ENST00000449537 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
AC004540.1-204ENST00000449537 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
AC004540.1-204ENST00000449537 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
AC004540.1-204ENST00000449537 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
AC004540.1-204ENST00000449537 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
AC004540.1-204ENST00000449537 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
AC004540.1-204ENST00000449537 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
AC004540.1-204ENST00000449537 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
AC004540.1-204ENST00000449537 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
AC004540.1-204ENST00000449537 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
AC004540.1-204ENST00000449537 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
AC004540.1-204ENST00000449537 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
AC004540.1-204ENST00000449537 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
AC004540.1-204ENST00000449537 MT1AP04731 61 aa3.69□□□□□ -1.82
AC004540.1-204ENST00000449537 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
AC004540.1-204ENST00000449537 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
AC004540.1-204ENST00000449537 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
AC004540.1-204ENST00000449537 MT3P25713 68 aa3.44□□□□□ -1.86
AC004540.1-204ENST00000449537 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
AC004540.1-204ENST00000449537 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
AC004540.1-204ENST00000449537 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
AC004540.1-204ENST00000449537 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
AC004540.1-204ENST00000449537 INE1O15225 51 aa3.1□□□□□ -1.91
AC004540.1-204ENST00000449537 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
AC004540.1-204ENST00000449537 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
AC004540.1-204ENST00000449537 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
AC004540.1-204ENST00000449537 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
AC004540.1-204ENST00000449537 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
AC004540.1-204ENST00000449537 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
AC004540.1-204ENST00000449537 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
AC004540.1-204ENST00000449537 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
AC004540.1-204ENST00000449537 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
AC004540.1-204ENST00000449537 PRM1P04553 51 aa2.43□□□□□ -2.02
AC004540.1-204ENST00000449537 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
AC004540.1-204ENST00000449537 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
AC004540.1-204ENST00000449537 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 68.8 ms