RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
NIF3L1-207ENST00000426253 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
NIF3L1-207ENST00000426253 SPTSSBQ8NFR3 76 aa2.57□□□□□ -2
NIF3L1-207ENST00000426253 MT1XP80297 61 aa2.56□□□□□ -2
NIF3L1-207ENST00000426253 LINC01554Q52M75 96 aa2.56□□□□□ -2
NIF3L1-207ENST00000426253 CHKB-CPT1BH3BT56 60 aa2.55□□□□□ -2
NIF3L1-207ENST00000426253 SPINT4Q6UDR6 99 aa2.55□□□□□ -2
NIF3L1-207ENST00000426253 SNURFQ9Y675 71 aa2.55□□□□□ -2
NIF3L1-207ENST00000426253 MT4P47944 62 aa2.53□□□□□ -2
NIF3L1-207ENST00000426253 SERP2Q8N6R1 65 aa2.51□□□□□ -2.01
NIF3L1-207ENST00000426253 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
NIF3L1-207ENST00000426253 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
NIF3L1-207ENST00000426253 COX7CP15954 63 aa2.44□□□□□ -2.02
NIF3L1-207ENST00000426253 COA5Q86WW8 74 aa2.44□□□□□ -2.02
NIF3L1-207ENST00000426253 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
NIF3L1-207ENST00000426253 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
NIF3L1-207ENST00000426253 ANAPC13Q9BS18 74 aa2.42□□□□□ -2.02
NIF3L1-207ENST00000426253 SERP1Q9Y6X1 66 aa2.42□□□□□ -2.02
NIF3L1-207ENST00000426253 K7ERS5 55 aa2.41□□□□□ -2.02
NIF3L1-207ENST00000426253 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
NIF3L1-207ENST00000426253 A0A0D9SG42 100 aa2.38□□□□□ -2.03
NIF3L1-207ENST00000426253 H7BZZ5 65 aa2.38□□□□□ -2.03
NIF3L1-207ENST00000426253 A0A1B0GU33 70 aa2.37□□□□□ -2.03
NIF3L1-207ENST00000426253 SPATA8Q6RVD6 105 aa2.37□□□□□ -2.03
NIF3L1-207ENST00000426253 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
NIF3L1-207ENST00000426253 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
NIF3L1-207ENST00000426253 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
NIF3L1-207ENST00000426253 A0A1B0GU69 56 aa2.33□□□□□ -2.04
NIF3L1-207ENST00000426253 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
NIF3L1-207ENST00000426253 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
NIF3L1-207ENST00000426253 CCDC179H3BU77 68 aa2.3□□□□□ -2.04
NIF3L1-207ENST00000426253 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
NIF3L1-207ENST00000426253 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
NIF3L1-207ENST00000426253 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
NIF3L1-207ENST00000426253 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
NIF3L1-207ENST00000426253 A6NED7 52 aa2.27□□□□□ -2.05
NIF3L1-207ENST00000426253 MT1EP04732 61 aa2.27□□□□□ -2.05
NIF3L1-207ENST00000426253 PRR15LQ9BU68 103 aa2.26□□□□□ -2.05
NIF3L1-207ENST00000426253 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
NIF3L1-207ENST00000426253 ATP5EP56381 51 aaPredicted RBP2.25□□□□□ -2.05
NIF3L1-207ENST00000426253 KRTAP19-5Q3LI72 72 aa2.24□□□□□ -2.05
NIF3L1-207ENST00000426253 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
NIF3L1-207ENST00000426253 LINC01558Q9Y6Z2 57 aa2.23□□□□□ -2.05
NIF3L1-207ENST00000426253 TNP1P09430 55 aa2.22□□□□□ -2.05
NIF3L1-207ENST00000426253 MT1GP13640 62 aa2.22□□□□□ -2.05
NIF3L1-207ENST00000426253 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
NIF3L1-207ENST00000426253 TMEM258P61165 79 aa2.21□□□□□ -2.06
NIF3L1-207ENST00000426253 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
NIF3L1-207ENST00000426253 UQCR11O14957 56 aa2.19□□□□□ -2.06
NIF3L1-207ENST00000426253 RPS28P62857 69 aaKnown RBP2.19□□□□□ -2.06
NIF3L1-207ENST00000426253 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
NIF3L1-207ENST00000426253 MT1LQ93083 61 aa2.17□□□□□ -2.06
NIF3L1-207ENST00000426253 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
NIF3L1-207ENST00000426253 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
NIF3L1-207ENST00000426253 MT1MQ8N339 61 aa2.16□□□□□ -2.06
NIF3L1-207ENST00000426253 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
NIF3L1-207ENST00000426253 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
NIF3L1-207ENST00000426253 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
NIF3L1-207ENST00000426253 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
NIF3L1-207ENST00000426253 Q1T7F1 81 aa2.09□□□□□ -2.07
NIF3L1-207ENST00000426253 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
NIF3L1-207ENST00000426253 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
NIF3L1-207ENST00000426253 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
NIF3L1-207ENST00000426253 CDC42SE1Q9NRR8 79 aa1.98□□□□□ -2.09
NIF3L1-207ENST00000426253 ROMO1P60602 79 aa1.96□□□□□ -2.1
NIF3L1-207ENST00000426253 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
NIF3L1-207ENST00000426253 PMAIP1Q13794 54 aa1.93□□□□□ -2.1
NIF3L1-207ENST00000426253 KTN1-AS1Q86SY8 53 aa1.9□□□□□ -2.11
NIF3L1-207ENST00000426253 MT1AP04731 61 aa1.84□□□□□ -2.11
NIF3L1-207ENST00000426253 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
NIF3L1-207ENST00000426253 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
NIF3L1-207ENST00000426253 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
NIF3L1-207ENST00000426253 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
NIF3L1-207ENST00000426253 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
NIF3L1-207ENST00000426253 INE1O15225 51 aa1.34□□□□□ -2.19
NIF3L1-207ENST00000426253 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
NIF3L1-207ENST00000426253 PRM1P04553 51 aa0.99□□□□□ -2.25
NIF3L1-207ENST00000426253 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 139.5 ms