RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 DNAH6Q9C0G6 4158 aa0.63□□□□□ -2.31
SSXP9-201ENST00000417503 HSPG2P98160 4391 aa0.63□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH1Q9P2D7 4330 aa0.63□□□□□ -2.31
SSXP9-201ENST00000417503 FLGP20930 4061 aaPredicted RBP0.63□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 MT1GP13640 62 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 PKD1P98161 4303 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 HECTD4Q9Y4D8 3996 aa0.62□□□□□ -2.31
SSXP9-201ENST00000417503 ANK3Q12955 4377 aaKnown RBP0.62□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH2Q9P225 4427 aa0.61□□□□□ -2.31
SSXP9-201ENST00000417503 MT2AP02795 61 aa0.61□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH17Q9UFH2 4485 aa0.61□□□□□ -2.31
SSXP9-201ENST00000417503 DNAH7Q8WXX0 4024 aa0.6□□□□□ -2.31
SSXP9-201ENST00000417503 MT1HL1P0DM35 61 aa0.6□□□□□ -2.31
SSXP9-201ENST00000417503 MT1MQ8N339 61 aa0.6□□□□□ -2.31
SSXP9-201ENST00000417503 VPS13CQ709C8 3753 aa0.59□□□□□ -2.31
SSXP9-201ENST00000417503 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
SSXP9-201ENST00000417503 LRP1Q07954 4544 aaKnown RBP0.57□□□□□ -2.32
SSXP9-201ENST00000417503 APOBP04114 4563 aaKnown RBP0.57□□□□□ -2.32
SSXP9-201ENST00000417503 MT1BP07438 61 aa0.57□□□□□ -2.32
SSXP9-201ENST00000417503 KRTAP19-2Q3LHN2 52 aa0.57□□□□□ -2.32
SSXP9-201ENST00000417503 PKHD1L1Q86WI1 4243 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 FAT3Q8TDW7 4589 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 MT1FP04733 61 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 KRTAP19-7Q3SYF9 63 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
SSXP9-201ENST00000417503 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
SSXP9-201ENST00000417503 LPAP08519 4548 aa0.55□□□□□ -2.32
SSXP9-201ENST00000417503 DNAH5Q8TE73 4624 aa0.54□□□□□ -2.32
SSXP9-201ENST00000417503 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.32
SSXP9-201ENST00000417503 PLECQ15149 4684 aaKnown RBP0.52□□□□□ -2.33
SSXP9-201ENST00000417503 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
SSXP9-201ENST00000417503 DNHD1Q96M86 4753 aa0.51□□□□□ -2.33
SSXP9-201ENST00000417503 DYNC1H1Q14204 4646 aaKnown RBP0.49□□□□□ -2.33
SSXP9-201ENST00000417503 FAT1Q14517 4588 aa0.49□□□□□ -2.33
SSXP9-201ENST00000417503 KRTAP6-1Q3LI64 71 aa0.48□□□□□ -2.33
SSXP9-201ENST00000417503 LRP1BQ9NZR2 4599 aa0.46□□□□□ -2.34
SSXP9-201ENST00000417503 MUC17Q685J3 4493 aa0.46□□□□□ -2.34
SSXP9-201ENST00000417503 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
SSXP9-201ENST00000417503 KMT2CQ8NEZ4 4911 aaKnown RBP0.45□□□□□ -2.34
SSXP9-201ENST00000417503 HYDINQ4G0P3 5121 aa0.44□□□□□ -2.34
SSXP9-201ENST00000417503 RYR3Q15413 4870 aa0.44□□□□□ -2.34
SSXP9-201ENST00000417503 RYR2Q92736 4967 aa0.43□□□□□ -2.34
SSXP9-201ENST00000417503 RYR1P21817 5038 aa0.43□□□□□ -2.34
SSXP9-201ENST00000417503 KIAA1109Q2LD37 5005 aa0.42□□□□□ -2.34
SSXP9-201ENST00000417503 HERC2O95714 4834 aa0.42□□□□□ -2.34
SSXP9-201ENST00000417503 EPPK1P58107 5090 aaKnown RBP0.41□□□□□ -2.34
SSXP9-201ENST00000417503 HERC1Q15751 4861 aa0.4□□□□□ -2.34
SSXP9-201ENST00000417503 BIRC6Q9NR09 4857 aa0.4□□□□□ -2.34
SSXP9-201ENST00000417503 LRP2P98164 4655 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 ABCA13Q86UQ4 5058 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 PCLOQ9Y6V0 5065 aa0.4□□□□□ -2.35
SSXP9-201ENST00000417503 MUC2Q02817 5179 aa0.39□□□□□ -2.35
SSXP9-201ENST00000417503 RNF213Q63HN8 5207 aa0.37□□□□□ -2.35
SSXP9-201ENST00000417503 UBR4Q5T4S7 5183 aa0.37□□□□□ -2.35
SSXP9-201ENST00000417503 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
SSXP9-201ENST00000417503 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
SSXP9-201ENST00000417503 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
SSXP9-201ENST00000417503 AHNAK2Q8IVF2 5795 aa0.32□□□□□ -2.36
SSXP9-201ENST00000417503 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
SSXP9-201ENST00000417503 USH2AO75445 5202 aa0.31□□□□□ -2.36
SSXP9-201ENST00000417503 AHNAKQ09666 5890 aaKnown RBP0.3□□□□□ -2.36
SSXP9-201ENST00000417503 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
SSXP9-201ENST00000417503 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
SSXP9-201ENST00000417503 MUC5BQ9HC84 5762 aaPredicted RBP0.28□□□□□ -2.37
SSXP9-201ENST00000417503 KMT2DO14686 5537 aa0.27□□□□□ -2.37
SSXP9-201ENST00000417503 MT4P47944 62 aa0.27□□□□□ -2.37
SSXP9-201ENST00000417503 NEBP20929 6669 aa0.27□□□□□ -2.37
SSXP9-201ENST00000417503 MUC12Q9UKN1 5478 aa0.26□□□□□ -2.37
SSXP9-201ENST00000417503 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
SSXP9-201ENST00000417503 DSTQ03001 7570 aaKnown RBP0.24□□□□□ -2.37
SSXP9-201ENST00000417503 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
SSXP9-201ENST00000417503 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
SSXP9-201ENST00000417503 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
SSXP9-201ENST00000417503 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 97.6 ms