RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Gm37389A0A0A6YW05 95 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 Gm37388A0A0A6YY46 143 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 Wdr86D3Z757 380 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 AngP21570 145 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 Foxe3Q9QY14 288 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 P01756 117 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 P01757 117 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 Cox6a1P43024 111 aa4.95□□□□□ -1.62
Vcan-203ENSMUST00000109546 Tmem200bD3Z0P8 284 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Gm26602M0QWA4 95 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Mst1P26928 716 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Zgrf1Q0VGT4 1863 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ss18l1Q8BW22 402 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Cryba2Q9JJV1 197 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Arid2E9Q7E2 1828 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 P01738 130 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Pebp1P70296 187 aaKnown RBP4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 AcacbE9Q4Z2 2448 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ccdc179J3QM76 67 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Gm13199Q8C8E0 125 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Gtf3aQ8VHT7 364 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Brwd1Q921C3 2304 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ighv5-9-1A0A0A6YVS4 126 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ighv1-52A0A0A6YXC3 117 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Trav9d-4A0A0G2JG37 103 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 C1qtnf5Q8K479 243 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Sbf1Q6ZPE2 1867 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Chchd2Q9D1L0 153 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Nup210Q9QY81 1886 aaKnown RBP4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Tnks1bp1P58871 1720 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Tcl1b3P56842 122 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Zg16Q8K0C5 167 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Zfp646Q6NV66 1788 aa4.94□□□□□ -1.62
Vcan-203ENSMUST00000109546 Pglyrp1O88593 182 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Spink6Q8BT20 105 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Plxna2P70207 1894 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 P01657 111 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Spaca3Q9D9X8 221 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Trav7-6A0A075B640 112 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 P01725 110 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Trav6-4A0A075B6B4 115 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Spink12Q9D256 87 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Rnf185Q91YT2 192 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Q9DAS2 200 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Kif26aQ52KG5 1881 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Foxf1Q61080 378 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Pnrc2Q9CR73 140 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 5530401A14RikQ9D3H9 131 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Prr14lE9Q7C4 1971 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ighv1-76A0A0G2JFE9 117 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Eif4ebp1Q60876 117 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Rpp25lQ99JH1 163 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 1700010B08RikQ9DAI7 102 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Fgf6P21658 208 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 GgnQ80WJ1 673 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Pygo1Q9D0P5 417 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 P01654 111 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 P01656 111 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 P03977 111 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ang5Q5GAN1 145 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ighv1-58A0A075B5W9 117 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Cfc1P97766 202 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Chchd5Q9CQP3 110 aa4.93□□□□□ -1.62
Vcan-203ENSMUST00000109546 Igkv20-101-2A0A0G2JDU3 113 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Gm10020E9QAZ2 204 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Rpl15Q9CZM2 204 aaKnown RBP4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 KcpQ3U492 1550 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Tcl1b4P56844 120 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ang3P97802 145 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 CrygcQ61597 174 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 4930447F04RikA2AFR2 126 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Plxnb3Q9QY40 1902 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ighv3-8A0A075B5T0 131 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Zfp11P10751 647 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 NrtnP97463 195 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Gm10645Q3UPY1 145 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Rchy1Q9CR50 261 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 UrahQ9CRB3 118 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Atad5Q4QY64 1826 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Trav7-1A0A0G2JEV5 112 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Nhsl1Q8CAF4 1587 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ighv1-9A0A0A6YW37 117 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Asphd1Q2TA57 360 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Tctex1d4Q8CDY7 219 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Notch4P31695 1964 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Gli3Q61602 1583 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Clpsl2Q3UW21 102 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Q99M08 65 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 HelzQ6DFV5 1964 aaKnown RBP4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 Q8K1L6 76 aa4.92□□□□□ -1.62
Vcan-203ENSMUST00000109546 NbasE9Q411 2356 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Sp5Q9JHX2 398 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 C1ql2Q8CFR0 287 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Znf22Q9ERU3 237 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Zfp462B1AWL2 2495 aaKnown RBP4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ube2d2P62838 147 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Prss22Q9ER10 306 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Dopey1Q8BL99 2399 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Shisa3Q3UPR0 238 aa4.91□□□□□ -1.62
Vcan-203ENSMUST00000109546 Ms4a8Q99N10 290 aa4.91□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 229 ms