RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	COX7C	P15954	63 aa		3.3	□□□□□ -1.88
CASC19-238	ENST00000641523	RBM3	P98179	157 aa	Known RBP	3.3	□□□□□ -1.88
CASC19-238	ENST00000641523	PCOTH	Q58A44	107 aa		3.3	□□□□□ -1.88
CASC19-238	ENST00000641523	BVES-AS1	Q5T3Y7	98 aa		3.3	□□□□□ -1.88
CASC19-238	ENST00000641523	LINC00575	Q6W349	94 aa		3.3	□□□□□ -1.88
CASC19-238	ENST00000641523	TMEM254	Q8TBM7	123 aa		3.3	□□□□□ -1.88
CASC19-238	ENST00000641523		A0A1W2PNM2	257 aa		3.29	□□□□□ -1.88
CASC19-238	ENST00000641523	MIR22HG	Q0VDD5	57 aa		3.29	□□□□□ -1.88
CASC19-238	ENST00000641523	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.29	□□□□□ -1.88
CASC19-238	ENST00000641523	KRTAP4-1	Q9BYQ7	146 aa		3.29	□□□□□ -1.88
CASC19-238	ENST00000641523	HRES1	P13985	223 aa		3.29	□□□□□ -1.88
CASC19-238	ENST00000641523		Q6ZQY7	126 aa		3.29	□□□□□ -1.88
CASC19-238	ENST00000641523	RPL37	P61927	97 aa	Known RBP	3.28	□□□□□ -1.88
CASC19-238	ENST00000641523	TRBV7-7	A0A0K0K1E9	115 aa		3.27	□□□□□ -1.89
CASC19-238	ENST00000641523	KRTAP9-6	A8MVA2	160 aa		3.27	□□□□□ -1.89
CASC19-238	ENST00000641523	COX8A	P10176	69 aa		3.26	□□□□□ -1.89
CASC19-238	ENST00000641523		H0YGX0	51 aa		3.25	□□□□□ -1.89
CASC19-238	ENST00000641523	IGFL1	Q6UW32	110 aa		3.25	□□□□□ -1.89
CASC19-238	ENST00000641523	COX6B2	Q6YFQ2	88 aa		3.25	□□□□□ -1.89
CASC19-238	ENST00000641523	PRO2289	Q9P1D8	64 aa		3.25	□□□□□ -1.89
CASC19-238	ENST00000641523	FSIP2	Q5CZC0	6907 aa		3.25	□□□□□ -1.89
CASC19-238	ENST00000641523		A0A0G2JQZ4	141 aa		3.25	□□□□□ -1.89
CASC19-238	ENST00000641523	HIGD1B	Q9P298	99 aa		3.24	□□□□□ -1.89
CASC19-238	ENST00000641523	MT1H	P80294	61 aa		3.23	□□□□□ -1.89
CASC19-238	ENST00000641523		M0R2T5	61 aa		3.22	□□□□□ -1.89
CASC19-238	ENST00000641523	ATP5E	P56381	51 aa	Predicted RBP	3.22	□□□□□ -1.89
CASC19-238	ENST00000641523	KRTAP19-2	Q3LHN2	52 aa		3.22	□□□□□ -1.89
CASC19-238	ENST00000641523	KRTAP5-2	Q701N4	177 aa		3.22	□□□□□ -1.89
CASC19-238	ENST00000641523		H3BUT2	72 aa		3.21	□□□□□ -1.89
CASC19-238	ENST00000641523	CCK	P06307	115 aa		3.21	□□□□□ -1.89
CASC19-238	ENST00000641523	SPATA45	Q537H7	98 aa		3.21	□□□□□ -1.89
CASC19-238	ENST00000641523	OBSCN-AS1	Q96MR7	158 aa		3.21	□□□□□ -1.89
CASC19-238	ENST00000641523	FLG	P20930	4061 aa	Predicted RBP	3.21	□□□□□ -1.9
CASC19-238	ENST00000641523	PRO1854	Q9UHT4	67 aa		3.21	□□□□□ -1.9
CASC19-238	ENST00000641523		K7EP34	96 aa		3.2	□□□□□ -1.9
CASC19-238	ENST00000641523	DNAL4	O96015	105 aa		3.2	□□□□□ -1.9
CASC19-238	ENST00000641523		Q1T7F1	81 aa		3.2	□□□□□ -1.9
CASC19-238	ENST00000641523	SPTSSB	Q8NFR3	76 aa		3.2	□□□□□ -1.9
CASC19-238	ENST00000641523		Q96NJ1	140 aa		3.19	□□□□□ -1.9
CASC19-238	ENST00000641523	COX6C	P09669	75 aa		3.18	□□□□□ -1.9
CASC19-238	ENST00000641523		F8W1H4	67 aa		3.17	□□□□□ -1.9
CASC19-238	ENST00000641523	ORMDL1	Q9P0S3	153 aa		3.17	□□□□□ -1.9
CASC19-238	ENST00000641523	CRCT1	Q9UGL9	99 aa		3.17	□□□□□ -1.9
CASC19-238	ENST00000641523	PRO0461	Q9UI25	63 aa		3.17	□□□□□ -1.9
CASC19-238	ENST00000641523	TRBV7-4	A0A0J9YYF1	115 aa		3.16	□□□□□ -1.9
CASC19-238	ENST00000641523	HCG22	E2RYF7	251 aa		3.15	□□□□□ -1.91
CASC19-238	ENST00000641523	CSAG1	Q6PB30	78 aa		3.15	□□□□□ -1.91
CASC19-238	ENST00000641523	IGKV4-1	P06312	121 aa		3.13	□□□□□ -1.91
CASC19-238	ENST00000641523	ATOX1	O00244	68 aa		3.12	□□□□□ -1.91
CASC19-238	ENST00000641523	UQCR10	Q9UDW1	63 aa		3.12	□□□□□ -1.91
CASC19-238	ENST00000641523	LINC00472	Q9H8W2	130 aa		3.1	□□□□□ -1.91
CASC19-238	ENST00000641523	CDC42SE1	Q9NRR8	79 aa		3.1	□□□□□ -1.91
CASC19-238	ENST00000641523	CYSTM1	Q9H1C7	97 aa		3.09	□□□□□ -1.91
CASC19-238	ENST00000641523	CYP4F30P	Q9H0H9	118 aa		3.08	□□□□□ -1.92
CASC19-238	ENST00000641523	NDUFB1	O75438	58 aa		3.08	□□□□□ -1.92
CASC19-238	ENST00000641523	SERP2	Q8N6R1	65 aa		3.08	□□□□□ -1.92
CASC19-238	ENST00000641523	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.07	□□□□□ -1.92
CASC19-238	ENST00000641523	PDE6G	P18545	87 aa		3.07	□□□□□ -1.92
CASC19-238	ENST00000641523	ATXN8	Q156A1	80 aa		3.05	□□□□□ -1.92
CASC19-238	ENST00000641523	ZCCHC13	Q8WW36	166 aa	Known RBP	3.04	□□□□□ -1.92
CASC19-238	ENST00000641523	SPCS1	Q9Y6A9	102 aa		3.04	□□□□□ -1.92
CASC19-238	ENST00000641523	LOC110117498	A0A087WWA1	95 aa		3.04	□□□□□ -1.92
CASC19-238	ENST00000641523	DMAC1	Q96GE9	116 aa		3.04	□□□□□ -1.92
CASC19-238	ENST00000641523	SSPO	A2VEC9	5147 aa		3.03	□□□□□ -1.92
CASC19-238	ENST00000641523	ETDB	Q3ZM63	59 aa		3.03	□□□□□ -1.92
CASC19-238	ENST00000641523	USH2A	O75445	5202 aa		3.03	□□□□□ -1.92
CASC19-238	ENST00000641523	NDUFC1	O43677	76 aa		3.02	□□□□□ -1.93
CASC19-238	ENST00000641523	SPINK7	P58062	85 aa		3.01	□□□□□ -1.93
CASC19-238	ENST00000641523	MT2A	P02795	61 aa		3	□□□□□ -1.93
CASC19-238	ENST00000641523	TRAV22	A0A0B4J277	110 aa		3	□□□□□ -1.93
CASC19-238	ENST00000641523		H7BZZ5	65 aa		3	□□□□□ -1.93
CASC19-238	ENST00000641523	NREP	Q16612	68 aa		3	□□□□□ -1.93
CASC19-238	ENST00000641523	IGKV3D-7	A0A0C4DH55	119 aa		2.99	□□□□□ -1.93
CASC19-238	ENST00000641523		A0A1W2PPM0	123 aa		2.99	□□□□□ -1.93
CASC19-238	ENST00000641523	KRTAP10-10	P60014	251 aa		2.99	□□□□□ -1.93
CASC19-238	ENST00000641523		Q5VV11	94 aa		2.99	□□□□□ -1.93
CASC19-238	ENST00000641523	WFDC13	Q8IUB5	93 aa		2.98	□□□□□ -1.93
CASC19-238	ENST00000641523	LINC00846	Q9NV44	126 aa		2.98	□□□□□ -1.93
CASC19-238	ENST00000641523	CHKB-CPT1B	H3BT56	60 aa		2.97	□□□□□ -1.93
CASC19-238	ENST00000641523	MT1F	P04733	61 aa		2.96	□□□□□ -1.94
CASC19-238	ENST00000641523	MRPL34	Q9BQ48	92 aa	Known RBP	2.96	□□□□□ -1.94
CASC19-238	ENST00000641523	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	2.96	□□□□□ -1.94
CASC19-238	ENST00000641523	SPRR5	A0A1B0GTR4	108 aa		2.95	□□□□□ -1.94
CASC19-238	ENST00000641523	C20orf197	Q8N268	126 aa		2.95	□□□□□ -1.94
CASC19-238	ENST00000641523	MMP24-AS1	A0A0U1RRL7	71 aa		2.95	□□□□□ -1.94
CASC19-238	ENST00000641523	OBSCN	Q5VST9	7968 aa		2.93	□□□□□ -1.94
CASC19-238	ENST00000641523	LOC101927531	A0A1B0GV80	90 aa		2.93	□□□□□ -1.94
CASC19-238	ENST00000641523	H1FX-AS1	Q4G0G2	97 aa		2.93	□□□□□ -1.94
CASC19-238	ENST00000641523	MACF1	Q9UPN3	7388 aa	Known RBP	2.93	□□□□□ -1.94
CASC19-238	ENST00000641523		K7EQZ3	153 aa		2.92	□□□□□ -1.94
CASC19-238	ENST00000641523	HMCN1	Q96RW7	5635 aa		2.92	□□□□□ -1.94
CASC19-238	ENST00000641523	KLKP1	Q107X0	134 aa		2.91	□□□□□ -1.94
CASC19-238	ENST00000641523	LCE3D	Q9BYE3	92 aa		2.91	□□□□□ -1.94
CASC19-238	ENST00000641523	KRTAP5-8	O75690	187 aa		2.9	□□□□□ -1.95
CASC19-238	ENST00000641523	COA5	Q86WW8	74 aa		2.9	□□□□□ -1.95
CASC19-238	ENST00000641523	SYNE2	Q8WXH0	6885 aa	Known RBP	2.9	□□□□□ -1.95
CASC19-238	ENST00000641523	UBL5	Q9BZL1	73 aa		2.89	□□□□□ -1.95
CASC19-238	ENST00000641523	KRTAP19-6	Q3LI70	58 aa		2.87	□□□□□ -1.95
CASC19-238	ENST00000641523	KRTAP4-3	Q9BYR4	195 aa		2.87	□□□□□ -1.95
CASC19-238	ENST00000641523	LINC00643	Q86TS7	51 aa		2.84	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms