RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 RELNP78509 3460 aa1.21□□□□□ -2.22
RFC1-217ENST00000639695 CACNA1AO00555 2505 aa1.21□□□□□ -2.22
RFC1-217ENST00000639695 VCANP13611 3396 aa1.21□□□□□ -2.22
RFC1-217ENST00000639695 NIPBLQ6KC79 2804 aaeCLIP1.21□□□□□ -2.225e-6■□□□□ 8.1
RFC1-217ENST00000639695 TRRAPQ9Y4A5 3859 aa1.2□□□□□ -2.22
RFC1-217ENST00000639695 DNAH1Q9P2D7 4330 aa1.2□□□□□ -2.22
RFC1-217ENST00000639695 SMR3AQ99954 134 aa1.2□□□□□ -2.22
RFC1-217ENST00000639695 LAMA5O15230 3695 aa1.2□□□□□ -2.22
RFC1-217ENST00000639695 TACC2O95359 2948 aa1.19□□□□□ -2.22
RFC1-217ENST00000639695 COL7A1Q02388 2944 aa1.19□□□□□ -2.22
RFC1-217ENST00000639695 TEX15Q9BXT5 2789 aa1.19□□□□□ -2.22
RFC1-217ENST00000639695 ANK2Q01484 3957 aa1.19□□□□□ -2.22
RFC1-217ENST00000639695 CMYA5Q8N3K9 4069 aa1.19□□□□□ -2.22
RFC1-217ENST00000639695 TGP01266 2768 aa1.19□□□□□ -2.22
RFC1-217ENST00000639695 PRKDCP78527 4128 aaKnown RBP1.18□□□□□ -2.22
RFC1-217ENST00000639695 SMG1Q96Q15 3661 aaKnown RBP1.18□□□□□ -2.22
RFC1-217ENST00000639695 ITPR3Q14573 2671 aa1.18□□□□□ -2.22
RFC1-217ENST00000639695 LAMA3Q16787 3333 aa1.18□□□□□ -2.22
RFC1-217ENST00000639695 MYCBP2O75592 4640 aa1.18□□□□□ -2.22
RFC1-217ENST00000639695 DCHS2Q6V1P9 2916 aa1.18□□□□□ -2.22
RFC1-217ENST00000639695 M0R2T5 61 aa1.17□□□□□ -2.22
RFC1-217ENST00000639695 CFAP46Q8IYW2 2715 aa1.17□□□□□ -2.22
RFC1-217ENST00000639695 DNAH3Q8TD57 4116 aa1.17□□□□□ -2.22
RFC1-217ENST00000639695 MTORP42345 2549 aa1.17□□□□□ -2.22
RFC1-217ENST00000639695 LYSTQ99698 3801 aa1.16□□□□□ -2.22
RFC1-217ENST00000639695 SETXQ7Z333 2677 aaKnown RBP1.16□□□□□ -2.22
RFC1-217ENST00000639695 CHD8Q9HCK8 2581 aa1.16□□□□□ -2.22
RFC1-217ENST00000639695 USP9YO00507 2555 aaPredicted RBP1.15□□□□□ -2.22
RFC1-217ENST00000639695 TENM4Q6N022 2769 aa1.15□□□□□ -2.22
RFC1-217ENST00000639695 DNAH7Q8WXX0 4024 aa1.15□□□□□ -2.22
RFC1-217ENST00000639695 DNAH2Q9P225 4427 aa1.15□□□□□ -2.22
RFC1-217ENST00000639695 ACANP16112 2415 aa1.15□□□□□ -2.23
RFC1-217ENST00000639695 DNAH8Q96JB1 4490 aa1.15□□□□□ -2.23
RFC1-217ENST00000639695 BRCA2P51587 3418 aa1.15□□□□□ -2.23
RFC1-217ENST00000639695 HECTD1Q9ULT8 2610 aa1.15□□□□□ -2.23
RFC1-217ENST00000639695 ASPMQ8IZT6 3477 aa1.14□□□□□ -2.23
RFC1-217ENST00000639695 CSMD3Q7Z407 3707 aa1.14□□□□□ -2.23
RFC1-217ENST00000639695 USP24Q9UPU5 2620 aa1.14□□□□□ -2.23
RFC1-217ENST00000639695 DNAH6Q9C0G6 4158 aa1.14□□□□□ -2.23
RFC1-217ENST00000639695 EPG5Q9HCE0 2579 aa1.14□□□□□ -2.23
RFC1-217ENST00000639695 DYNC2H1Q8NCM8 4307 aaKnown RBP1.14□□□□□ -2.23
RFC1-217ENST00000639695 VPS13BQ7Z7G8 4022 aa1.14□□□□□ -2.23
RFC1-217ENST00000639695 MYO9AB2RTY4 2548 aa1.14□□□□□ -2.23
RFC1-217ENST00000639695 HRNRQ86YZ3 2850 aaPredicted RBP1.14□□□□□ -2.23
RFC1-217ENST00000639695 GCN1Q92616 2671 aaKnown RBP1.13□□□□□ -2.23
RFC1-217ENST00000639695 HUWE1Q7Z6Z7 4374 aaKnown RBP1.13□□□□□ -2.23
RFC1-217ENST00000639695 SACSQ9NZJ4 4579 aa1.13□□□□□ -2.23
RFC1-217ENST00000639695 HECTD4Q9Y4D8 3996 aa1.13□□□□□ -2.23
RFC1-217ENST00000639695 MYO15AQ9UKN7 3530 aa1.12□□□□□ -2.23
RFC1-217ENST00000639695 CDH23Q9H251 3354 aa1.12□□□□□ -2.23
RFC1-217ENST00000639695 UNC79Q9P2D8 2635 aa1.12□□□□□ -2.23
RFC1-217ENST00000639695 KRTAP8-1Q8IUC2 63 aa1.12□□□□□ -2.23
RFC1-217ENST00000639695 ANK3Q12955 4377 aaKnown RBP1.12□□□□□ -2.23
RFC1-217ENST00000639695 ZNF292O60281 2723 aa1.12□□□□□ -2.23
RFC1-217ENST00000639695 FLGP20930 4061 aaPredicted RBP1.12□□□□□ -2.23
RFC1-217ENST00000639695 VPS13CQ709C8 3753 aa1.11□□□□□ -2.23
RFC1-217ENST00000639695 ZFYVE26Q68DK2 2539 aa1.11□□□□□ -2.23
RFC1-217ENST00000639695 PDZD2O15018 2839 aa1.11□□□□□ -2.23
RFC1-217ENST00000639695 MUC3AQ02505 3323 aa1.11□□□□□ -2.23
RFC1-217ENST00000639695 STAB2Q8WWQ8 2551 aa1.1□□□□□ -2.23
RFC1-217ENST00000639695 KMT2AQ03164 3969 aa1.1□□□□□ -2.23
RFC1-217ENST00000639695 ADGRG4Q8IZF6 3080 aa1.1□□□□□ -2.23
RFC1-217ENST00000639695 DNAH10Q8IVF4 4471 aa1.1□□□□□ -2.23
RFC1-217ENST00000639695 DNAH9Q9NYC9 4486 aa1.1□□□□□ -2.23
RFC1-217ENST00000639695 DNAH17Q9UFH2 4485 aa1.1□□□□□ -2.23
RFC1-217ENST00000639695 TEP1Q99973 2627 aaKnown RBP1.1□□□□□ -2.23
RFC1-217ENST00000639695 NBEAL1Q6ZS30 2694 aa1.1□□□□□ -2.23
RFC1-217ENST00000639695 FASNP49327 2511 aaKnown RBP1.09□□□□□ -2.23
RFC1-217ENST00000639695 CUBNO60494 3623 aa1.09□□□□□ -2.23
RFC1-217ENST00000639695 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
RFC1-217ENST00000639695 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
RFC1-217ENST00000639695 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.23
RFC1-217ENST00000639695 NBEAL2Q6ZNJ1 2754 aa1.08□□□□□ -2.24
RFC1-217ENST00000639695 MYO18BQ8IUG5 2567 aa1.08□□□□□ -2.24
RFC1-217ENST00000639695 CEP295Q9C0D2 2601 aa1.07□□□□□ -2.24
RFC1-217ENST00000639695 PKD1P98161 4303 aa1.07□□□□□ -2.24
RFC1-217ENST00000639695 FLNCQ14315 2725 aa1.07□□□□□ -2.24
RFC1-217ENST00000639695 CSMD2Q7Z408 3487 aa1.06□□□□□ -2.24
RFC1-217ENST00000639695 HSPG2P98160 4391 aa1.06□□□□□ -2.24
RFC1-217ENST00000639695 ITPR2Q14571 2701 aa1.06□□□□□ -2.24
RFC1-217ENST00000639695 PKHD1L1Q86WI1 4243 aa1.06□□□□□ -2.24
RFC1-217ENST00000639695 ATRQ13535 2644 aa1.05□□□□□ -2.24
RFC1-217ENST00000639695 ANKRD11Q6UB99 2663 aaPredicted RBP1.05□□□□□ -2.24
RFC1-217ENST00000639695 MXRA5Q9NR99 2828 aa1.05□□□□□ -2.24
RFC1-217ENST00000639695 HIVEP1P15822 2718 aa1.04□□□□□ -2.24
RFC1-217ENST00000639695 APOBP04114 4563 aaKnown RBP1.04□□□□□ -2.24
RFC1-217ENST00000639695 EYSQ5T1H1 3165 aa1.04□□□□□ -2.24
RFC1-217ENST00000639695 TENM3Q9P273 2699 aa1.04□□□□□ -2.24
RFC1-217ENST00000639695 DNAH5Q8TE73 4624 aa1.03□□□□□ -2.24
RFC1-217ENST00000639695 ZANQ9Y493 2812 aa1.03□□□□□ -2.24
RFC1-217ENST00000639695 SVEP1Q4LDE5 3571 aa1.03□□□□□ -2.25
RFC1-217ENST00000639695 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.25
RFC1-217ENST00000639695 PKD1L1Q8TDX9 2849 aa1.02□□□□□ -2.25
RFC1-217ENST00000639695 MGAM2Q2M2H8 2515 aa1.01□□□□□ -2.25
RFC1-217ENST00000639695 ACACBO00763 2458 aa1.01□□□□□ -2.25
RFC1-217ENST00000639695 STAB1Q9NY15 2570 aa1□□□□□ -2.25
RFC1-217ENST00000639695 FLNAP21333 2647 aaKnown RBP1□□□□□ -2.25
RFC1-217ENST00000639695 PLECQ15149 4684 aaKnown RBP0.99□□□□□ -2.25
RFC1-217ENST00000639695 SMR3BP02814 79 aaPredicted RBP0.99□□□□□ -2.25
RFC1-217ENST00000639695 FAT2Q9NYQ8 4349 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms