RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 COX6B2Q6YFQ2 88 aa5.59□□□□□ -1.51
TARDBP-230ENST00000639083 LCA10Q71F78 164 aa5.56□□□□□ -1.52
TARDBP-230ENST00000639083 A6NED7 52 aa5.54□□□□□ -1.52
TARDBP-230ENST00000639083 A0A1B0GU69 56 aa5.53□□□□□ -1.52
TARDBP-230ENST00000639083 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
TARDBP-230ENST00000639083 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
TARDBP-230ENST00000639083 SEC61GP60059 68 aa5.47□□□□□ -1.53
TARDBP-230ENST00000639083 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
TARDBP-230ENST00000639083 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
TARDBP-230ENST00000639083 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
TARDBP-230ENST00000639083 LCE2BO14633 110 aa5.41□□□□□ -1.54
TARDBP-230ENST00000639083 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
TARDBP-230ENST00000639083 S4R3F8 94 aa5.41□□□□□ -1.54
TARDBP-230ENST00000639083 HERC1Q15751 4861 aa5.41□□□□□ -1.54
TARDBP-230ENST00000639083 RBM12B-AS1Q9P1G2 102 aa5.4□□□□□ -1.54
TARDBP-230ENST00000639083 UQCR11O14957 56 aa5.39□□□□□ -1.55
TARDBP-230ENST00000639083 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
TARDBP-230ENST00000639083 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
TARDBP-230ENST00000639083 A6NN06 94 aa5.35□□□□□ -1.55
TARDBP-230ENST00000639083 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
TARDBP-230ENST00000639083 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
TARDBP-230ENST00000639083 MUC2Q02817 5179 aa5.33□□□□□ -1.56
TARDBP-230ENST00000639083 A0A1B0GU33 70 aa5.32□□□□□ -1.56
TARDBP-230ENST00000639083 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
TARDBP-230ENST00000639083 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
TARDBP-230ENST00000639083 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
TARDBP-230ENST00000639083 H0YAA0 97 aa5.27□□□□□ -1.57
TARDBP-230ENST00000639083 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
TARDBP-230ENST00000639083 P0C880 135 aa5.23□□□□□ -1.57
TARDBP-230ENST00000639083 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
TARDBP-230ENST00000639083 ADM2Q7Z4H4 148 aa5.22□□□□□ -1.57
TARDBP-230ENST00000639083 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
TARDBP-230ENST00000639083 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
TARDBP-230ENST00000639083 UBR4Q5T4S7 5183 aa5.13□□□□□ -1.59
TARDBP-230ENST00000639083 A0A0D9SG42 100 aa5.12□□□□□ -1.59
TARDBP-230ENST00000639083 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
TARDBP-230ENST00000639083 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
TARDBP-230ENST00000639083 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
TARDBP-230ENST00000639083 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
TARDBP-230ENST00000639083 M0QZ58 72 aa5.05□□□□□ -1.6
TARDBP-230ENST00000639083 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
TARDBP-230ENST00000639083 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
TARDBP-230ENST00000639083 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
TARDBP-230ENST00000639083 K7ERS5 55 aa5.04□□□□□ -1.6
TARDBP-230ENST00000639083 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
TARDBP-230ENST00000639083 R4GN34 69 aa5.02□□□□□ -1.61
TARDBP-230ENST00000639083 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
TARDBP-230ENST00000639083 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
TARDBP-230ENST00000639083 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
TARDBP-230ENST00000639083 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
TARDBP-230ENST00000639083 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
TARDBP-230ENST00000639083 MT1HP80294 61 aa4.93□□□□□ -1.62
TARDBP-230ENST00000639083 M0R2T5 61 aa4.92□□□□□ -1.62
TARDBP-230ENST00000639083 ROMO1P60602 79 aa4.88□□□□□ -1.63
TARDBP-230ENST00000639083 KRTAP25-1Q3LHN0 102 aa4.83□□□□□ -1.64
TARDBP-230ENST00000639083 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
TARDBP-230ENST00000639083 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
TARDBP-230ENST00000639083 MT2AP02795 61 aa4.77□□□□□ -1.65
TARDBP-230ENST00000639083 MT1FP04733 61 aa4.76□□□□□ -1.65
TARDBP-230ENST00000639083 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
TARDBP-230ENST00000639083 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
TARDBP-230ENST00000639083 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
TARDBP-230ENST00000639083 H3BS24 57 aa4.72□□□□□ -1.65
TARDBP-230ENST00000639083 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
TARDBP-230ENST00000639083 PLAC4Q8WY50 150 aa4.63□□□□□ -1.67
TARDBP-230ENST00000639083 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
TARDBP-230ENST00000639083 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
TARDBP-230ENST00000639083 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
TARDBP-230ENST00000639083 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
TARDBP-230ENST00000639083 MT1BP07438 61 aa4.53□□□□□ -1.68
TARDBP-230ENST00000639083 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
TARDBP-230ENST00000639083 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
TARDBP-230ENST00000639083 TNP1P09430 55 aa4.49□□□□□ -1.69
TARDBP-230ENST00000639083 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
TARDBP-230ENST00000639083 MT1XP80297 61 aa4.43□□□□□ -1.7
TARDBP-230ENST00000639083 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
TARDBP-230ENST00000639083 USH2AO75445 5202 aa4.41□□□□□ -1.7
TARDBP-230ENST00000639083 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
TARDBP-230ENST00000639083 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
TARDBP-230ENST00000639083 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
TARDBP-230ENST00000639083 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
TARDBP-230ENST00000639083 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
TARDBP-230ENST00000639083 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
TARDBP-230ENST00000639083 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
TARDBP-230ENST00000639083 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
TARDBP-230ENST00000639083 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
TARDBP-230ENST00000639083 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
TARDBP-230ENST00000639083 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
TARDBP-230ENST00000639083 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
TARDBP-230ENST00000639083 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
TARDBP-230ENST00000639083 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
TARDBP-230ENST00000639083 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
TARDBP-230ENST00000639083 KMT2DO14686 5537 aa4.17□□□□□ -1.74
TARDBP-230ENST00000639083 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
TARDBP-230ENST00000639083 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
TARDBP-230ENST00000639083 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
TARDBP-230ENST00000639083 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.76
TARDBP-230ENST00000639083 KRTAP19-5Q3LI72 72 aa4.05□□□□□ -1.76
TARDBP-230ENST00000639083 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
TARDBP-230ENST00000639083 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms