RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 MIR22HGQ0VDD5 57 aa9.68□□□□□ -0.86
CLN8-211ENST00000636934 KIAA1109Q2LD37 5005 aa9.67□□□□□ -0.86
CLN8-211ENST00000636934 A6NN06 94 aa9.64□□□□□ -0.87
CLN8-211ENST00000636934 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
CLN8-211ENST00000636934 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
CLN8-211ENST00000636934 MYCBP2O75592 4640 aa9.53□□□□□ -0.88
CLN8-211ENST00000636934 A0A1B0GU33 70 aa9.48□□□□□ -0.89
CLN8-211ENST00000636934 H1FX-AS1Q4G0G2 97 aa9.46□□□□□ -0.9
CLN8-211ENST00000636934 S4R3F8 94 aa9.45□□□□□ -0.9
CLN8-211ENST00000636934 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
CLN8-211ENST00000636934 H0YAA0 97 aa9.38□□□□□ -0.91
CLN8-211ENST00000636934 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
CLN8-211ENST00000636934 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
CLN8-211ENST00000636934 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
CLN8-211ENST00000636934 J3QL48 77 aa9.29□□□□□ -0.92
CLN8-211ENST00000636934 SEC61BP60468 96 aaKnown RBP9.27□□□□□ -0.93
CLN8-211ENST00000636934 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
CLN8-211ENST00000636934 LRP2P98164 4655 aa9.22□□□□□ -0.93
CLN8-211ENST00000636934 K7ERS5 55 aa9.21□□□□□ -0.94
CLN8-211ENST00000636934 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
CLN8-211ENST00000636934 CSAG1Q6PB30 78 aa9.19□□□□□ -0.94
CLN8-211ENST00000636934 HERC1Q15751 4861 aa9.14□□□□□ -0.95
CLN8-211ENST00000636934 LPAP08519 4548 aa9.13□□□□□ -0.95
CLN8-211ENST00000636934 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
CLN8-211ENST00000636934 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
CLN8-211ENST00000636934 P0C880 135 aa9.07□□□□□ -0.96
CLN8-211ENST00000636934 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
CLN8-211ENST00000636934 A0A0D9SG42 100 aa8.97□□□□□ -0.97
CLN8-211ENST00000636934 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
CLN8-211ENST00000636934 M0QZ58 72 aa8.96□□□□□ -0.98
CLN8-211ENST00000636934 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
CLN8-211ENST00000636934 KRTAP4-1Q9BYQ7 146 aa8.91□□□□□ -0.98
CLN8-211ENST00000636934 ROMO1P60602 79 aa8.86□□□□□ -0.99
CLN8-211ENST00000636934 LINC01554Q52M75 96 aa8.78□□□□□ -1
CLN8-211ENST00000636934 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
CLN8-211ENST00000636934 KRTAP19-2Q3LHN2 52 aa8.76□□□□□ -1.01
CLN8-211ENST00000636934 KRTAP12-1P59990 96 aa8.76□□□□□ -1.01
CLN8-211ENST00000636934 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
CLN8-211ENST00000636934 SPINT4Q6UDR6 99 aa8.74□□□□□ -1.01
CLN8-211ENST00000636934 R4GN34 69 aa8.74□□□□□ -1.01
CLN8-211ENST00000636934 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
CLN8-211ENST00000636934 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
CLN8-211ENST00000636934 FLGP20930 4061 aaPredicted RBP8.58□□□□□ -1.04
CLN8-211ENST00000636934 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
CLN8-211ENST00000636934 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
CLN8-211ENST00000636934 MUC2Q02817 5179 aa8.36□□□□□ -1.07
CLN8-211ENST00000636934 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
CLN8-211ENST00000636934 RNF213Q63HN8 5207 aa8.35□□□□□ -1.07
CLN8-211ENST00000636934 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
CLN8-211ENST00000636934 M0R2T5 61 aa8.22□□□□□ -1.09
CLN8-211ENST00000636934 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
CLN8-211ENST00000636934 MT1HP80294 61 aa8.17□□□□□ -1.1
CLN8-211ENST00000636934 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
CLN8-211ENST00000636934 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
CLN8-211ENST00000636934 PP632Q6XCG6 107 aa8.05□□□□□ -1.12
CLN8-211ENST00000636934 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
CLN8-211ENST00000636934 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
CLN8-211ENST00000636934 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
CLN8-211ENST00000636934 MT2AP02795 61 aa7.98□□□□□ -1.13
CLN8-211ENST00000636934 KRTAP10-10P60014 251 aa7.98□□□□□ -1.13
CLN8-211ENST00000636934 TNP1P09430 55 aa7.96□□□□□ -1.14
CLN8-211ENST00000636934 MT1FP04733 61 aa7.94□□□□□ -1.14
CLN8-211ENST00000636934 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
CLN8-211ENST00000636934 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
CLN8-211ENST00000636934 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
CLN8-211ENST00000636934 KRTAP19-8Q3LI54 63 aa7.81□□□□□ -1.16
CLN8-211ENST00000636934 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
CLN8-211ENST00000636934 CRCT1Q9UGL9 99 aa7.64□□□□□ -1.19
CLN8-211ENST00000636934 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
CLN8-211ENST00000636934 MT1BP07438 61 aa7.63□□□□□ -1.19
CLN8-211ENST00000636934 FSIP2Q5CZC0 6907 aa7.56□□□□□ -1.2
CLN8-211ENST00000636934 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
CLN8-211ENST00000636934 NDUFAF8A1L188 74 aa7.54□□□□□ -1.2
CLN8-211ENST00000636934 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
CLN8-211ENST00000636934 H3BS24 57 aa7.51□□□□□ -1.21
CLN8-211ENST00000636934 MT1XP80297 61 aa7.51□□□□□ -1.21
CLN8-211ENST00000636934 LCE3AQ5TA76 89 aa7.46□□□□□ -1.21
CLN8-211ENST00000636934 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
CLN8-211ENST00000636934 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
CLN8-211ENST00000636934 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
CLN8-211ENST00000636934 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
CLN8-211ENST00000636934 LCE2BO14633 110 aa7.31□□□□□ -1.24
CLN8-211ENST00000636934 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
CLN8-211ENST00000636934 KRTAP9-7A8MTY7 169 aa7.25□□□□□ -1.25
CLN8-211ENST00000636934 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
CLN8-211ENST00000636934 KRTAP12-3P60328 96 aa7.18□□□□□ -1.26
CLN8-211ENST00000636934 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
CLN8-211ENST00000636934 USH2AO75445 5202 aa6.98□□□□□ -1.29
CLN8-211ENST00000636934 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
CLN8-211ENST00000636934 A0A0A0MQY5 61 aa6.82□□□□□ -1.32
CLN8-211ENST00000636934 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
CLN8-211ENST00000636934 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
CLN8-211ENST00000636934 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
CLN8-211ENST00000636934 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
CLN8-211ENST00000636934 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
CLN8-211ENST00000636934 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
CLN8-211ENST00000636934 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
CLN8-211ENST00000636934 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
CLN8-211ENST00000636934 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
CLN8-211ENST00000636934 KMT2DO14686 5537 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms