RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 HUWE1Q7Z6Z7 4374 aaKnown RBP0.72□□□□□ -2.29
PSPC1-208ENST00000635562 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
PSPC1-208ENST00000635562 FLGP20930 4061 aaPredicted RBP0.72□□□□□ -2.29
PSPC1-208ENST00000635562 ACACBO00763 2458 aa0.72□□□□□ -2.29
PSPC1-208ENST00000635562 TLN2Q9Y4G6 2542 aa0.71□□□□□ -2.3
PSPC1-208ENST00000635562 DEFB136Q30KP8 78 aa0.71□□□□□ -2.3
PSPC1-208ENST00000635562 KRTAP8-1Q8IUC2 63 aa0.71□□□□□ -2.3
PSPC1-208ENST00000635562 DEFB124Q8NES8 71 aa0.71□□□□□ -2.3
PSPC1-208ENST00000635562 U3KQA8 63 aa0.71□□□□□ -2.3
PSPC1-208ENST00000635562 ANK3Q12955 4377 aaKnown RBP0.71□□□□□ -2.3
PSPC1-208ENST00000635562 DNAH7Q8WXX0 4024 aa0.71□□□□□ -2.3
PSPC1-208ENST00000635562 DNAH12Q6ZR08 3092 aa0.7□□□□□ -2.3
PSPC1-208ENST00000635562 A0A096LNI7 61 aa0.7□□□□□ -2.3
PSPC1-208ENST00000635562 HTN1P15515 57 aa0.7□□□□□ -2.3
PSPC1-208ENST00000635562 DEFB110Q30KQ9 67 aa0.7□□□□□ -2.3
PSPC1-208ENST00000635562 C5orf42Q9H799 3197 aa0.69□□□□□ -2.3
PSPC1-208ENST00000635562 LAMA3Q16787 3333 aa0.69□□□□□ -2.3
PSPC1-208ENST00000635562 COX14Q96I36 57 aa0.69□□□□□ -2.3
PSPC1-208ENST00000635562 HSPG2P98160 4391 aa0.69□□□□□ -2.3
PSPC1-208ENST00000635562 TRIOO75962 3097 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 BOD1L1Q8NFC6 3051 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 SMG1Q96Q15 3661 aaKnown RBP0.68□□□□□ -2.3
PSPC1-208ENST00000635562 CFAP46Q8IYW2 2715 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 CUBNO60494 3623 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 CSMD1Q96PZ7 3565 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 HECTD4Q9Y4D8 3996 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 ITPR2Q14571 2701 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 HTTP42858 3142 aa0.68□□□□□ -2.3
PSPC1-208ENST00000635562 MYO18BQ8IUG5 2567 aa0.67□□□□□ -2.3
PSPC1-208ENST00000635562 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
PSPC1-208ENST00000635562 DNAH10Q8IVF4 4471 aa0.67□□□□□ -2.3
PSPC1-208ENST00000635562 TGP01266 2768 aa0.67□□□□□ -2.3
PSPC1-208ENST00000635562 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
PSPC1-208ENST00000635562 CEP350Q5VT06 3117 aa0.66□□□□□ -2.3
PSPC1-208ENST00000635562 HRNRQ86YZ3 2850 aaPredicted RBP0.66□□□□□ -2.3
PSPC1-208ENST00000635562 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.3
PSPC1-208ENST00000635562 TEX15Q9BXT5 2789 aa0.65□□□□□ -2.3
PSPC1-208ENST00000635562 MKI67P46013 3256 aaKnown RBP0.65□□□□□ -2.31
PSPC1-208ENST00000635562 SONP18583 2426 aaKnown RBP0.65□□□□□ -2.31
PSPC1-208ENST00000635562 FLNAP21333 2647 aaKnown RBP0.65□□□□□ -2.31
PSPC1-208ENST00000635562 SPTBN5Q9NRC6 3674 aaKnown RBP0.64□□□□□ -2.31
PSPC1-208ENST00000635562 DNAH9Q9NYC9 4486 aa0.64□□□□□ -2.31
PSPC1-208ENST00000635562 DNAH1Q9P2D7 4330 aa0.64□□□□□ -2.31
PSPC1-208ENST00000635562 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
PSPC1-208ENST00000635562 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
PSPC1-208ENST00000635562 NBEAL1Q6ZS30 2694 aa0.63□□□□□ -2.31
PSPC1-208ENST00000635562 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
PSPC1-208ENST00000635562 SZT2Q5T011 3432 aa0.63□□□□□ -2.31
PSPC1-208ENST00000635562 MUC3AQ02505 3323 aa0.63□□□□□ -2.31
PSPC1-208ENST00000635562 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
PSPC1-208ENST00000635562 SPRR2DP22532 72 aa0.62□□□□□ -2.31
PSPC1-208ENST00000635562 KRTAP5-10Q6L8G5 202 aa0.62□□□□□ -2.31
PSPC1-208ENST00000635562 DEFB108BQ8NET1 73 aa0.62□□□□□ -2.31
PSPC1-208ENST00000635562 CMYA5Q8N3K9 4069 aa0.62□□□□□ -2.31
PSPC1-208ENST00000635562 WDFY4Q6ZS81 3184 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 DMDP11532 3685 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 ADGRG4Q8IZF6 3080 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 PKHD1P08F94 4074 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 DCHS1Q96JQ0 3298 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 MGAM2Q2M2H8 2515 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 SPRR2BP35325 72 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 FREM2Q5SZK8 3169 aa0.61□□□□□ -2.31
PSPC1-208ENST00000635562 CEP295Q9C0D2 2601 aa0.6□□□□□ -2.31
PSPC1-208ENST00000635562 LPAP08519 4548 aa0.6□□□□□ -2.31
PSPC1-208ENST00000635562 SMR3BP02814 79 aaPredicted RBP0.6□□□□□ -2.31
PSPC1-208ENST00000635562 MT1AP04731 61 aa0.6□□□□□ -2.31
PSPC1-208ENST00000635562 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
PSPC1-208ENST00000635562 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
PSPC1-208ENST00000635562 DOPEY1Q5JWR5 2465 aa0.6□□□□□ -2.31
PSPC1-208ENST00000635562 MAST4O15021 2626 aa0.6□□□□□ -2.31
PSPC1-208ENST00000635562 PLECQ15149 4684 aaKnown RBP0.6□□□□□ -2.31
PSPC1-208ENST00000635562 LAMA1P25391 3075 aa0.59□□□□□ -2.31
PSPC1-208ENST00000635562 SVEP1Q4LDE5 3571 aa0.59□□□□□ -2.31
PSPC1-208ENST00000635562 CENPEQ02224 2701 aa0.59□□□□□ -2.32
PSPC1-208ENST00000635562 XIRP2A4UGR9 3374 aa0.59□□□□□ -2.32
PSPC1-208ENST00000635562 SPTAN1Q13813 2472 aaKnown RBP0.59□□□□□ -2.32
PSPC1-208ENST00000635562 TRRAPQ9Y4A5 3859 aa0.58□□□□□ -2.32
PSPC1-208ENST00000635562 RPS29P62273 56 aaKnown RBP0.58□□□□□ -2.32
PSPC1-208ENST00000635562 LINC01556Q5JQF7 62 aa0.58□□□□□ -2.32
PSPC1-208ENST00000635562 DNAH17Q9UFH2 4485 aa0.58□□□□□ -2.32
PSPC1-208ENST00000635562 CSMD2Q7Z408 3487 aa0.57□□□□□ -2.32
PSPC1-208ENST00000635562 A0A096LPF7 62 aa0.57□□□□□ -2.32
PSPC1-208ENST00000635562 SPRR2AP35326 72 aa0.57□□□□□ -2.32
PSPC1-208ENST00000635562 DEFB133Q30KQ1 61 aa0.57□□□□□ -2.32
PSPC1-208ENST00000635562 Q9Y3F1 56 aa0.57□□□□□ -2.32
PSPC1-208ENST00000635562 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
PSPC1-208ENST00000635562 DNAH5Q8TE73 4624 aa0.56□□□□□ -2.32
PSPC1-208ENST00000635562 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
PSPC1-208ENST00000635562 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
PSPC1-208ENST00000635562 CFAP47Q6ZTR5 3102 aa0.55□□□□□ -2.32
PSPC1-208ENST00000635562 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
PSPC1-208ENST00000635562 LAMA2P24043 3122 aaKnown RBP0.55□□□□□ -2.32
PSPC1-208ENST00000635562 LRP1BQ9NZR2 4599 aa0.53□□□□□ -2.33
PSPC1-208ENST00000635562 FAT1Q14517 4588 aa0.52□□□□□ -2.33
PSPC1-208ENST00000635562 DYNC1H1Q14204 4646 aaKnown RBP0.52□□□□□ -2.33
PSPC1-208ENST00000635562 TLN1Q9Y490 2541 aaKnown RBP0.52□□□□□ -2.33
PSPC1-208ENST00000635562 SPRR2FQ96RM1 72 aa0.52□□□□□ -2.33
PSPC1-208ENST00000635562 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
PSPC1-208ENST00000635562 UTRNP46939 3433 aa0.52□□□□□ -2.33
PSPC1-208ENST00000635562 LOC400499M0QZD8 3231 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms