RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
SRGAP2-217ENST00000624873 STARD9Q9P2P6 4700 aa4.67□□□□□ -1.66
SRGAP2-217ENST00000624873 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
SRGAP2-217ENST00000624873 RYR1P21817 5038 aa4.67□□□□□ -1.66
SRGAP2-217ENST00000624873 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
SRGAP2-217ENST00000624873 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
SRGAP2-217ENST00000624873 CSMD3Q7Z407 3707 aa4.65□□□□□ -1.67
SRGAP2-217ENST00000624873 DNAH17Q9UFH2 4485 aa4.64□□□□□ -1.67
SRGAP2-217ENST00000624873 LRP1BQ9NZR2 4599 aa4.64□□□□□ -1.67
SRGAP2-217ENST00000624873 KRTAP3-3Q9BYR6 98 aa4.61□□□□□ -1.67
SRGAP2-217ENST00000624873 FAT1Q14517 4588 aa4.6□□□□□ -1.67
SRGAP2-217ENST00000624873 KIAA1109Q2LD37 5005 aa4.59□□□□□ -1.67
SRGAP2-217ENST00000624873 FAT2Q9NYQ8 4349 aa4.57□□□□□ -1.68
SRGAP2-217ENST00000624873 DYNC2H1Q8NCM8 4307 aaKnown RBP4.55□□□□□ -1.68
SRGAP2-217ENST00000624873 RYR3Q15413 4870 aa4.55□□□□□ -1.68
SRGAP2-217ENST00000624873 KRTAP3-2Q9BYR7 98 aa4.54□□□□□ -1.68
SRGAP2-217ENST00000624873 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.69
SRGAP2-217ENST00000624873 DNAH2Q9P225 4427 aa4.53□□□□□ -1.69
SRGAP2-217ENST00000624873 SACSQ9NZJ4 4579 aa4.49□□□□□ -1.69
SRGAP2-217ENST00000624873 MT1HP80294 61 aa4.48□□□□□ -1.69
SRGAP2-217ENST00000624873 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
SRGAP2-217ENST00000624873 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.7
SRGAP2-217ENST00000624873 KRTAP17-1Q9BYP8 105 aa4.44□□□□□ -1.7
SRGAP2-217ENST00000624873 RYR2Q92736 4967 aa4.44□□□□□ -1.7
SRGAP2-217ENST00000624873 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
SRGAP2-217ENST00000624873 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
SRGAP2-217ENST00000624873 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
SRGAP2-217ENST00000624873 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
SRGAP2-217ENST00000624873 HERC2O95714 4834 aa4.38□□□□□ -1.71
SRGAP2-217ENST00000624873 MT2AP02795 61 aa4.37□□□□□ -1.71
SRGAP2-217ENST00000624873 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
SRGAP2-217ENST00000624873 CMYA5Q8N3K9 4069 aa4.36□□□□□ -1.71
SRGAP2-217ENST00000624873 APOBP04114 4563 aaKnown RBP4.35□□□□□ -1.71
SRGAP2-217ENST00000624873 DNAH8Q96JB1 4490 aa4.33□□□□□ -1.72
SRGAP2-217ENST00000624873 LYSTQ99698 3801 aa4.33□□□□□ -1.72
SRGAP2-217ENST00000624873 VPS13BQ7Z7G8 4022 aa4.33□□□□□ -1.72
SRGAP2-217ENST00000624873 MT1FP04733 61 aa4.26□□□□□ -1.73
SRGAP2-217ENST00000624873 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
SRGAP2-217ENST00000624873 SPRR2GQ9BYE4 73 aa4.26□□□□□ -1.73
SRGAP2-217ENST00000624873 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
SRGAP2-217ENST00000624873 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
SRGAP2-217ENST00000624873 DNAH7Q8WXX0 4024 aa4.23□□□□□ -1.73
SRGAP2-217ENST00000624873 LRP1Q07954 4544 aaKnown RBP4.23□□□□□ -1.73
SRGAP2-217ENST00000624873 MYCBP2O75592 4640 aa4.22□□□□□ -1.73
SRGAP2-217ENST00000624873 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
SRGAP2-217ENST00000624873 HYDINQ4G0P3 5121 aa4.2□□□□□ -1.74
SRGAP2-217ENST00000624873 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SRGAP2-217ENST00000624873 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
SRGAP2-217ENST00000624873 HSPG2P98160 4391 aa4.17□□□□□ -1.74
SRGAP2-217ENST00000624873 KMT2CQ8NEZ4 4911 aaKnown RBP4.16□□□□□ -1.74
SRGAP2-217ENST00000624873 HERC1Q15751 4861 aa4.15□□□□□ -1.75
SRGAP2-217ENST00000624873 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
SRGAP2-217ENST00000624873 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
SRGAP2-217ENST00000624873 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
SRGAP2-217ENST00000624873 LRP2P98164 4655 aa4.05□□□□□ -1.76
SRGAP2-217ENST00000624873 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
SRGAP2-217ENST00000624873 LCE2CQ5TA81 110 aa4.04□□□□□ -1.76
SRGAP2-217ENST00000624873 PKD1P98161 4303 aa4.03□□□□□ -1.76
SRGAP2-217ENST00000624873 INE1O15225 51 aa4.03□□□□□ -1.76
SRGAP2-217ENST00000624873 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
SRGAP2-217ENST00000624873 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
SRGAP2-217ENST00000624873 EPPK1P58107 5090 aaKnown RBP4.02□□□□□ -1.77
SRGAP2-217ENST00000624873 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
SRGAP2-217ENST00000624873 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
SRGAP2-217ENST00000624873 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
SRGAP2-217ENST00000624873 FRAS1Q86XX4 4008 aa3.95□□□□□ -1.78
SRGAP2-217ENST00000624873 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
SRGAP2-217ENST00000624873 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
SRGAP2-217ENST00000624873 MT1BP07438 61 aa3.89□□□□□ -1.79
SRGAP2-217ENST00000624873 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
SRGAP2-217ENST00000624873 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
SRGAP2-217ENST00000624873 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
SRGAP2-217ENST00000624873 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
SRGAP2-217ENST00000624873 MT1XP80297 61 aa3.83□□□□□ -1.8
SRGAP2-217ENST00000624873 SPRR2EP22531 72 aa3.82□□□□□ -1.8
SRGAP2-217ENST00000624873 SPRR2BP35325 72 aa3.82□□□□□ -1.8
SRGAP2-217ENST00000624873 SPRR2AP35326 72 aa3.82□□□□□ -1.8
SRGAP2-217ENST00000624873 LPAP08519 4548 aa3.81□□□□□ -1.8
SRGAP2-217ENST00000624873 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
SRGAP2-217ENST00000624873 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
SRGAP2-217ENST00000624873 TNXBP22105 4242 aa3.79□□□□□ -1.8
SRGAP2-217ENST00000624873 LCE2AQ5TA79 106 aaPredicted RBP3.78□□□□□ -1.8
SRGAP2-217ENST00000624873 LCE2BO14633 110 aa3.77□□□□□ -1.81
SRGAP2-217ENST00000624873 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
SRGAP2-217ENST00000624873 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
SRGAP2-217ENST00000624873 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
SRGAP2-217ENST00000624873 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
SRGAP2-217ENST00000624873 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.82
SRGAP2-217ENST00000624873 SPRR2DP22532 72 aa3.7□□□□□ -1.82
SRGAP2-217ENST00000624873 FLGP20930 4061 aaPredicted RBP3.7□□□□□ -1.82
SRGAP2-217ENST00000624873 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
SRGAP2-217ENST00000624873 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
SRGAP2-217ENST00000624873 KRTAP4-8Q9BYQ9 185 aa3.66□□□□□ -1.82
SRGAP2-217ENST00000624873 MT1GP13640 62 aa3.65□□□□□ -1.82
SRGAP2-217ENST00000624873 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.83
SRGAP2-217ENST00000624873 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
SRGAP2-217ENST00000624873 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.84
SRGAP2-217ENST00000624873 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
SRGAP2-217ENST00000624873 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
SRGAP2-217ENST00000624873 MT1EP04732 61 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms