RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 DNAH1Q9P2D7 4330 aa5.59□□□□□ -1.51
ATRX-214ENST00000624166 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
ATRX-214ENST00000624166 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
ATRX-214ENST00000624166 DNAH3Q8TD57 4116 aa5.57□□□□□ -1.52
ATRX-214ENST00000624166 DNAH11Q96DT5 4516 aa5.57□□□□□ -1.52
ATRX-214ENST00000624166 VPS13DQ5THJ4 4388 aa5.55□□□□□ -1.52
ATRX-214ENST00000624166 LYSTQ99698 3801 aa5.55□□□□□ -1.52
ATRX-214ENST00000624166 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
ATRX-214ENST00000624166 DNAH17Q9UFH2 4485 aa5.49□□□□□ -1.53
ATRX-214ENST00000624166 DNAH5Q8TE73 4624 aa5.49□□□□□ -1.53
ATRX-214ENST00000624166 DNAH8Q96JB1 4490 aa5.45□□□□□ -1.54
ATRX-214ENST00000624166 DNAH7Q8WXX0 4024 aa5.44□□□□□ -1.54
ATRX-214ENST00000624166 FAT1Q14517 4588 aa5.42□□□□□ -1.54
ATRX-214ENST00000624166 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
ATRX-214ENST00000624166 LRP1BQ9NZR2 4599 aa5.39□□□□□ -1.55
ATRX-214ENST00000624166 DYNC1H1Q14204 4646 aaKnown RBP5.38□□□□□ -1.55
ATRX-214ENST00000624166 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
ATRX-214ENST00000624166 DNAH2Q9P225 4427 aa5.36□□□□□ -1.55
ATRX-214ENST00000624166 DYNC2H1Q8NCM8 4307 aaKnown RBP5.35□□□□□ -1.55
ATRX-214ENST00000624166 HYDINQ4G0P3 5121 aa5.33□□□□□ -1.56
ATRX-214ENST00000624166 KIAA1109Q2LD37 5005 aa5.3□□□□□ -1.56
ATRX-214ENST00000624166 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
ATRX-214ENST00000624166 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
ATRX-214ENST00000624166 DNAH6Q9C0G6 4158 aa5.28□□□□□ -1.56
ATRX-214ENST00000624166 SACSQ9NZJ4 4579 aa5.28□□□□□ -1.56
ATRX-214ENST00000624166 KMT2CQ8NEZ4 4911 aaKnown RBP5.24□□□□□ -1.57
ATRX-214ENST00000624166 RYR3Q15413 4870 aa5.22□□□□□ -1.57
ATRX-214ENST00000624166 INE1O15225 51 aa5.21□□□□□ -1.57
ATRX-214ENST00000624166 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
ATRX-214ENST00000624166 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
ATRX-214ENST00000624166 RYR1P21817 5038 aa5.21□□□□□ -1.58
ATRX-214ENST00000624166 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
ATRX-214ENST00000624166 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
ATRX-214ENST00000624166 VPS13BQ7Z7G8 4022 aa5.19□□□□□ -1.58
ATRX-214ENST00000624166 FRAS1Q86XX4 4008 aa5.18□□□□□ -1.58
ATRX-214ENST00000624166 RYR2Q92736 4967 aa5.18□□□□□ -1.58
ATRX-214ENST00000624166 FAT2Q9NYQ8 4349 aa5.18□□□□□ -1.58
ATRX-214ENST00000624166 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
ATRX-214ENST00000624166 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
ATRX-214ENST00000624166 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
ATRX-214ENST00000624166 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
ATRX-214ENST00000624166 FAT3Q8TDW7 4589 aa5.04□□□□□ -1.6
ATRX-214ENST00000624166 PKD1P98161 4303 aa5.04□□□□□ -1.6
ATRX-214ENST00000624166 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
ATRX-214ENST00000624166 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
ATRX-214ENST00000624166 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
ATRX-214ENST00000624166 HSPG2P98160 4391 aa4.94□□□□□ -1.62
ATRX-214ENST00000624166 HERC2O95714 4834 aa4.93□□□□□ -1.62
ATRX-214ENST00000624166 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
ATRX-214ENST00000624166 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
ATRX-214ENST00000624166 LRP2P98164 4655 aa4.83□□□□□ -1.64
ATRX-214ENST00000624166 BIRC6Q9NR09 4857 aa4.81□□□□□ -1.64
ATRX-214ENST00000624166 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
ATRX-214ENST00000624166 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
ATRX-214ENST00000624166 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
ATRX-214ENST00000624166 LPAP08519 4548 aa4.71□□□□□ -1.66
ATRX-214ENST00000624166 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
ATRX-214ENST00000624166 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
ATRX-214ENST00000624166 TNXBP22105 4242 aa4.63□□□□□ -1.67
ATRX-214ENST00000624166 MT2AP02795 61 aa4.6□□□□□ -1.67
ATRX-214ENST00000624166 HERC1Q15751 4861 aa4.58□□□□□ -1.68
ATRX-214ENST00000624166 MT1HP80294 61 aa4.58□□□□□ -1.68
ATRX-214ENST00000624166 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
ATRX-214ENST00000624166 MT1FP04733 61 aa4.53□□□□□ -1.68
ATRX-214ENST00000624166 PCLOQ9Y6V0 5065 aa4.49□□□□□ -1.69
ATRX-214ENST00000624166 KRTAP19-8Q3LI54 63 aa4.49□□□□□ -1.69
ATRX-214ENST00000624166 MUC2Q02817 5179 aa4.46□□□□□ -1.7
ATRX-214ENST00000624166 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
ATRX-214ENST00000624166 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
ATRX-214ENST00000624166 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
ATRX-214ENST00000624166 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
ATRX-214ENST00000624166 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
ATRX-214ENST00000624166 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
ATRX-214ENST00000624166 MT1XP80297 61 aa4.38□□□□□ -1.71
ATRX-214ENST00000624166 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
ATRX-214ENST00000624166 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
ATRX-214ENST00000624166 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
ATRX-214ENST00000624166 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
ATRX-214ENST00000624166 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
ATRX-214ENST00000624166 MT1BP07438 61 aa4.32□□□□□ -1.72
ATRX-214ENST00000624166 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
ATRX-214ENST00000624166 MUC17Q685J3 4493 aa4.3□□□□□ -1.72
ATRX-214ENST00000624166 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
ATRX-214ENST00000624166 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
ATRX-214ENST00000624166 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
ATRX-214ENST00000624166 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
ATRX-214ENST00000624166 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
ATRX-214ENST00000624166 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
ATRX-214ENST00000624166 KRTAP12-4P60329 112 aa4□□□□□ -1.77
ATRX-214ENST00000624166 LCE2BO14633 110 aa3.98□□□□□ -1.77
ATRX-214ENST00000624166 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
ATRX-214ENST00000624166 MT1LQ93083 61 aa3.92□□□□□ -1.78
ATRX-214ENST00000624166 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
ATRX-214ENST00000624166 MT1GP13640 62 aa3.89□□□□□ -1.79
ATRX-214ENST00000624166 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
ATRX-214ENST00000624166 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
ATRX-214ENST00000624166 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
ATRX-214ENST00000624166 MT1EP04732 61 aa3.87□□□□□ -1.79
ATRX-214ENST00000624166 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
ATRX-214ENST00000624166 USH2AO75445 5202 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms