RNA–Protein interactions for RNA: ENST00000623368.3

FDFT1-226, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-226ENST00000623368 FAT1Q14517 4588 aa10.22□□□□□ -0.77
FDFT1-226ENST00000623368 PKHD1L1Q86WI1 4243 aa10.21□□□□□ -0.77
FDFT1-226ENST00000623368 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
FDFT1-226ENST00000623368 RYR2Q92736 4967 aa10.21□□□□□ -0.77
FDFT1-226ENST00000623368 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
FDFT1-226ENST00000623368 RPL37P61927 97 aaKnown RBP10.16□□□□□ -0.78
FDFT1-226ENST00000623368 C10orf95Q9H7T3 257 aa10.11□□□□□ -0.79
FDFT1-226ENST00000623368 RYR3Q15413 4870 aa10.06□□□□□ -0.8
FDFT1-226ENST00000623368 KRTAP10-6P60371 365 aaPredicted RBP9.97□□□□□ -0.81
FDFT1-226ENST00000623368 LUZP6Q538Z0 58 aa9.96□□□□□ -0.82
FDFT1-226ENST00000623368 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
FDFT1-226ENST00000623368 A0A0D9SG42 100 aa9.9□□□□□ -0.82
FDFT1-226ENST00000623368 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
FDFT1-226ENST00000623368 TNXBP22105 4242 aa9.86□□□□□ -0.83
FDFT1-226ENST00000623368 KRTAP3-2Q9BYR7 98 aa9.86□□□□□ -0.83
FDFT1-226ENST00000623368 HSPG2P98160 4391 aa9.85□□□□□ -0.83
FDFT1-226ENST00000623368 FAT3Q8TDW7 4589 aa9.85□□□□□ -0.83
FDFT1-226ENST00000623368 LRP1Q07954 4544 aaKnown RBP9.84□□□□□ -0.83
FDFT1-226ENST00000623368 S4R3F8 94 aa9.78□□□□□ -0.84
FDFT1-226ENST00000623368 Q5VSD8 79 aa9.78□□□□□ -0.84
FDFT1-226ENST00000623368 KRTAP10-8P60410 259 aa9.77□□□□□ -0.85
FDFT1-226ENST00000623368 RYR1P21817 5038 aa9.75□□□□□ -0.85
FDFT1-226ENST00000623368 EPPK1P58107 5090 aaKnown RBP9.73□□□□□ -0.85
FDFT1-226ENST00000623368 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
FDFT1-226ENST00000623368 XP32Q5T750 250 aa9.71□□□□□ -0.86
FDFT1-226ENST00000623368 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
FDFT1-226ENST00000623368 KRTAP12-2P59991 146 aa9.68□□□□□ -0.86
FDFT1-226ENST00000623368 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
FDFT1-226ENST00000623368 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
FDFT1-226ENST00000623368 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
FDFT1-226ENST00000623368 MYCBP2O75592 4640 aa9.52□□□□□ -0.89
FDFT1-226ENST00000623368 M0QZ58 72 aa9.46□□□□□ -0.89
FDFT1-226ENST00000623368 PLAC4Q8WY50 150 aa9.46□□□□□ -0.89
FDFT1-226ENST00000623368 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
FDFT1-226ENST00000623368 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
FDFT1-226ENST00000623368 LRP2P98164 4655 aa9.24□□□□□ -0.93
FDFT1-226ENST00000623368 LPAP08519 4548 aa9.23□□□□□ -0.93
FDFT1-226ENST00000623368 KRTAP4-5Q9BYR2 181 aa9.21□□□□□ -0.94
FDFT1-226ENST00000623368 ABCA13Q86UQ4 5058 aa9.16□□□□□ -0.94
FDFT1-226ENST00000623368 HERC2O95714 4834 aa9.15□□□□□ -0.94
FDFT1-226ENST00000623368 R4GN34 69 aa9.08□□□□□ -0.96
FDFT1-226ENST00000623368 PCLOQ9Y6V0 5065 aa9.08□□□□□ -0.96
FDFT1-226ENST00000623368 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
FDFT1-226ENST00000623368 MUC17Q685J3 4493 aa8.92□□□□□ -0.98
FDFT1-226ENST00000623368 CAMK2N1Q7Z7J9 78 aa8.9□□□□□ -0.98
FDFT1-226ENST00000623368 J3QL48 77 aa8.84□□□□□ -0.99
FDFT1-226ENST00000623368 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
FDFT1-226ENST00000623368 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
FDFT1-226ENST00000623368 HERC1Q15751 4861 aa8.75□□□□□ -1.01
FDFT1-226ENST00000623368 PRO2289Q9P1D8 64 aa8.75□□□□□ -1.01
FDFT1-226ENST00000623368 SPRR5A0A1B0GTR4 108 aa8.71□□□□□ -1.02
FDFT1-226ENST00000623368 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
FDFT1-226ENST00000623368 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
FDFT1-226ENST00000623368 TNP1P09430 55 aa8.44□□□□□ -1.06
FDFT1-226ENST00000623368 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
FDFT1-226ENST00000623368 INE1O15225 51 aa8.43□□□□□ -1.06
FDFT1-226ENST00000623368 MUC2Q02817 5179 aa8.42□□□□□ -1.06
FDFT1-226ENST00000623368 HMCN2Q8NDA2 5059 aa8.41□□□□□ -1.06
FDFT1-226ENST00000623368 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
FDFT1-226ENST00000623368 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
FDFT1-226ENST00000623368 RNF213Q63HN8 5207 aa8.15□□□□□ -1.11
FDFT1-226ENST00000623368 FAT4Q6V0I7 4981 aa8.08□□□□□ -1.12
FDFT1-226ENST00000623368 MT1HP80294 61 aa7.97□□□□□ -1.13
FDFT1-226ENST00000623368 SPRR2GQ9BYE4 73 aa7.94□□□□□ -1.14
FDFT1-226ENST00000623368 M0R2T5 61 aa7.91□□□□□ -1.14
FDFT1-226ENST00000623368 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.15
FDFT1-226ENST00000623368 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
FDFT1-226ENST00000623368 MT2AP02795 61 aa7.82□□□□□ -1.16
FDFT1-226ENST00000623368 MT1FP04733 61 aa7.82□□□□□ -1.16
FDFT1-226ENST00000623368 KRTAP9-8Q9BYQ0 159 aa7.77□□□□□ -1.17
FDFT1-226ENST00000623368 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
FDFT1-226ENST00000623368 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
FDFT1-226ENST00000623368 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
FDFT1-226ENST00000623368 MT1BP07438 61 aa7.53□□□□□ -1.2
FDFT1-226ENST00000623368 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
FDFT1-226ENST00000623368 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
FDFT1-226ENST00000623368 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
FDFT1-226ENST00000623368 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
FDFT1-226ENST00000623368 MT1XP80297 61 aa7.42□□□□□ -1.22
FDFT1-226ENST00000623368 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
FDFT1-226ENST00000623368 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
FDFT1-226ENST00000623368 LCE2BO14633 110 aa7.19□□□□□ -1.26
FDFT1-226ENST00000623368 LCE3CQ5T5A8 94 aa7.11□□□□□ -1.27
FDFT1-226ENST00000623368 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
FDFT1-226ENST00000623368 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
FDFT1-226ENST00000623368 USH2AO75445 5202 aa6.96□□□□□ -1.29
FDFT1-226ENST00000623368 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
FDFT1-226ENST00000623368 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
FDFT1-226ENST00000623368 KRTAP2-1Q9BYU5 128 aa6.9□□□□□ -1.3
FDFT1-226ENST00000623368 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
FDFT1-226ENST00000623368 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
FDFT1-226ENST00000623368 KMT2DO14686 5537 aa6.79□□□□□ -1.32
FDFT1-226ENST00000623368 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.32
FDFT1-226ENST00000623368 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.32
FDFT1-226ENST00000623368 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
FDFT1-226ENST00000623368 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
FDFT1-226ENST00000623368 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
FDFT1-226ENST00000623368 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
FDFT1-226ENST00000623368 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
FDFT1-226ENST00000623368 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms