RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 C9orf92A6NGG3 77 aa10.13□□□□□ -0.79
PCDHB2-202ENST00000622947 IGKV2-30P06310 120 aa10.03□□□□□ -0.8
PCDHB2-202ENST00000622947 ABCA13Q86UQ4 5058 aa10.02□□□□□ -0.8
PCDHB2-202ENST00000622947 C20orf166-AS1Q96NR2 134 aa10.01□□□□□ -0.81
PCDHB2-202ENST00000622947 A8MUU9 505 aa9.99□□□□□ -0.81
PCDHB2-202ENST00000622947 BIRC6Q9NR09 4857 aa9.99□□□□□ -0.81
PCDHB2-202ENST00000622947 HERC2O95714 4834 aa9.94□□□□□ -0.82
PCDHB2-202ENST00000622947 IGKV2D-30A0A075B6S6 120 aa9.92□□□□□ -0.82
PCDHB2-202ENST00000622947 KRTAP25-1Q3LHN0 102 aa9.87□□□□□ -0.83
PCDHB2-202ENST00000622947 ROMO1P60602 79 aa9.86□□□□□ -0.83
PCDHB2-202ENST00000622947 XP32Q5T750 250 aa9.82□□□□□ -0.84
PCDHB2-202ENST00000622947 LPAP08519 4548 aa9.81□□□□□ -0.84
PCDHB2-202ENST00000622947 LRP2P98164 4655 aa9.77□□□□□ -0.85
PCDHB2-202ENST00000622947 RPL37P61927 97 aaKnown RBP9.75□□□□□ -0.85
PCDHB2-202ENST00000622947 H0YAA0 97 aa9.69□□□□□ -0.86
PCDHB2-202ENST00000622947 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
PCDHB2-202ENST00000622947 J3QL48 77 aa9.64□□□□□ -0.87
PCDHB2-202ENST00000622947 PCLOQ9Y6V0 5065 aa9.64□□□□□ -0.87
PCDHB2-202ENST00000622947 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
PCDHB2-202ENST00000622947 P0C880 135 aa9.58□□□□□ -0.88
PCDHB2-202ENST00000622947 A0A1B0GU33 70 aa9.54□□□□□ -0.88
PCDHB2-202ENST00000622947 H1FX-AS1Q4G0G2 97 aa9.5□□□□□ -0.89
PCDHB2-202ENST00000622947 HERC1Q15751 4861 aa9.49□□□□□ -0.89
PCDHB2-202ENST00000622947 COX6B2Q6YFQ2 88 aa9.47□□□□□ -0.89
PCDHB2-202ENST00000622947 K7ERS5 55 aa9.46□□□□□ -0.9
PCDHB2-202ENST00000622947 CRIPTQ9P021 101 aa9.45□□□□□ -0.9
PCDHB2-202ENST00000622947 MUC17Q685J3 4493 aa9.36□□□□□ -0.91
PCDHB2-202ENST00000622947 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
PCDHB2-202ENST00000622947 SPINT4Q6UDR6 99 aa9.3□□□□□ -0.92
PCDHB2-202ENST00000622947 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
PCDHB2-202ENST00000622947 SEC61BP60468 96 aaKnown RBP9.28□□□□□ -0.92
PCDHB2-202ENST00000622947 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
PCDHB2-202ENST00000622947 MUC2Q02817 5179 aa9.22□□□□□ -0.93
PCDHB2-202ENST00000622947 NDUFAF8A1L188 74 aa9.18□□□□□ -0.94
PCDHB2-202ENST00000622947 KRTAP15-1Q3LI76 137 aa9.17□□□□□ -0.94
PCDHB2-202ENST00000622947 S4R3F8 94 aa9.16□□□□□ -0.94
PCDHB2-202ENST00000622947 KRTAP19-2Q3LHN2 52 aa9.07□□□□□ -0.96
PCDHB2-202ENST00000622947 C10orf95Q9H7T3 257 aa9.01□□□□□ -0.97
PCDHB2-202ENST00000622947 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
PCDHB2-202ENST00000622947 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.97
PCDHB2-202ENST00000622947 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
PCDHB2-202ENST00000622947 KRTAP13-4Q3LI77 160 aa8.95□□□□□ -0.98
PCDHB2-202ENST00000622947 A0A0D9SG42 100 aa8.95□□□□□ -0.98
PCDHB2-202ENST00000622947 A0A0A0MQY5 61 aa8.92□□□□□ -0.98
PCDHB2-202ENST00000622947 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
PCDHB2-202ENST00000622947 RNF213Q63HN8 5207 aa8.87□□□□□ -0.99
PCDHB2-202ENST00000622947 FAT4Q6V0I7 4981 aa8.81□□□□□ -1
PCDHB2-202ENST00000622947 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
PCDHB2-202ENST00000622947 KRTAP12-2P59991 146 aa8.73□□□□□ -1.01
PCDHB2-202ENST00000622947 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
PCDHB2-202ENST00000622947 LUZP6Q538Z0 58 aa8.61□□□□□ -1.03
PCDHB2-202ENST00000622947 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
PCDHB2-202ENST00000622947 M0QZ58 72 aa8.56□□□□□ -1.04
PCDHB2-202ENST00000622947 MT1HP80294 61 aa8.53□□□□□ -1.04
PCDHB2-202ENST00000622947 R4GN34 69 aa8.45□□□□□ -1.06
PCDHB2-202ENST00000622947 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
PCDHB2-202ENST00000622947 M0R2T5 61 aa8.39□□□□□ -1.07
PCDHB2-202ENST00000622947 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
PCDHB2-202ENST00000622947 MT2AP02795 61 aa8.24□□□□□ -1.09
PCDHB2-202ENST00000622947 MT1FP04733 61 aa8.23□□□□□ -1.09
PCDHB2-202ENST00000622947 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
PCDHB2-202ENST00000622947 KRTAP10-10P60014 251 aa8.14□□□□□ -1.11
PCDHB2-202ENST00000622947 SPRR2GQ9BYE4 73 aa8.13□□□□□ -1.11
PCDHB2-202ENST00000622947 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
PCDHB2-202ENST00000622947 PP632Q6XCG6 107 aa8.05□□□□□ -1.12
PCDHB2-202ENST00000622947 KRTAP9-3Q9BYQ3 159 aa7.95□□□□□ -1.14
PCDHB2-202ENST00000622947 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
PCDHB2-202ENST00000622947 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
PCDHB2-202ENST00000622947 MT1BP07438 61 aa7.83□□□□□ -1.16
PCDHB2-202ENST00000622947 SPRR5A0A1B0GTR4 108 aa7.76□□□□□ -1.17
PCDHB2-202ENST00000622947 LCE2BO14633 110 aa7.74□□□□□ -1.17
PCDHB2-202ENST00000622947 USH2AO75445 5202 aa7.65□□□□□ -1.18
PCDHB2-202ENST00000622947 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
PCDHB2-202ENST00000622947 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
PCDHB2-202ENST00000622947 MT1XP80297 61 aa7.62□□□□□ -1.19
PCDHB2-202ENST00000622947 KRTAP10-5P60370 271 aa7.61□□□□□ -1.19
PCDHB2-202ENST00000622947 TNP1P09430 55 aa7.59□□□□□ -1.19
PCDHB2-202ENST00000622947 INE1O15225 51 aa7.42□□□□□ -1.22
PCDHB2-202ENST00000622947 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
PCDHB2-202ENST00000622947 SSPOA2VEC9 5147 aa7.31□□□□□ -1.24
PCDHB2-202ENST00000622947 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
PCDHB2-202ENST00000622947 FSIP2Q5CZC0 6907 aa7.27□□□□□ -1.25
PCDHB2-202ENST00000622947 KRTAP10-12P60413 245 aa7.21□□□□□ -1.25
PCDHB2-202ENST00000622947 KMT2DO14686 5537 aa7.2□□□□□ -1.26
PCDHB2-202ENST00000622947 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
PCDHB2-202ENST00000622947 KRTAP19-6Q3LI70 58 aa7.12□□□□□ -1.27
PCDHB2-202ENST00000622947 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
PCDHB2-202ENST00000622947 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
PCDHB2-202ENST00000622947 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
PCDHB2-202ENST00000622947 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
PCDHB2-202ENST00000622947 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
PCDHB2-202ENST00000622947 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
PCDHB2-202ENST00000622947 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
PCDHB2-202ENST00000622947 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
PCDHB2-202ENST00000622947 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
PCDHB2-202ENST00000622947 MT1EP04732 61 aa6.64□□□□□ -1.35
PCDHB2-202ENST00000622947 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
PCDHB2-202ENST00000622947 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
PCDHB2-202ENST00000622947 MT1LQ93083 61 aa6.53□□□□□ -1.36
PCDHB2-202ENST00000622947 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms