RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 A0A1B0GVY2 172 aa11.7□□□□□ -0.54
PCSK6-220ENST00000622483 COX6B2Q6YFQ2 88 aa11.69□□□□□ -0.54
PCSK6-220ENST00000622483 C10orf95Q9H7T3 257 aa11.66□□□□□ -0.54
PCSK6-220ENST00000622483 LRP1Q07954 4544 aaKnown RBP11.64□□□□□ -0.55
PCSK6-220ENST00000622483 MYCBP2O75592 4640 aa11.57□□□□□ -0.56
PCSK6-220ENST00000622483 NDUFAF8A1L188 74 aa11.57□□□□□ -0.56
PCSK6-220ENST00000622483 TPRXLQ17RH7 258 aa11.57□□□□□ -0.56
PCSK6-220ENST00000622483 KRTAP17-1Q9BYP8 105 aa11.51□□□□□ -0.57
PCSK6-220ENST00000622483 HSPG2P98160 4391 aa11.5□□□□□ -0.57
PCSK6-220ENST00000622483 KRTAP13-4Q3LI77 160 aa11.46□□□□□ -0.57
PCSK6-220ENST00000622483 RPL37P61927 97 aaKnown RBP11.42□□□□□ -0.58
PCSK6-220ENST00000622483 Q5VSD8 79 aa11.37□□□□□ -0.59
PCSK6-220ENST00000622483 RYR1P21817 5038 aa11.36□□□□□ -0.59
PCSK6-220ENST00000622483 KRTAP10-4P60372 401 aaPredicted RBP11.35□□□□□ -0.59
PCSK6-220ENST00000622483 C20orf166-AS1Q96NR2 134 aa11.31□□□□□ -0.6
PCSK6-220ENST00000622483 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
PCSK6-220ENST00000622483 KRTAP10-6P60371 365 aaPredicted RBP11.29□□□□□ -0.6
PCSK6-220ENST00000622483 PKHD1L1Q86WI1 4243 aa11.29□□□□□ -0.6
PCSK6-220ENST00000622483 KRTAP15-1Q3LI76 137 aa11.23□□□□□ -0.61
PCSK6-220ENST00000622483 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
PCSK6-220ENST00000622483 KRTAP12-2P59991 146 aa11.14□□□□□ -0.63
PCSK6-220ENST00000622483 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
PCSK6-220ENST00000622483 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
PCSK6-220ENST00000622483 S4R3F8 94 aa11.11□□□□□ -0.63
PCSK6-220ENST00000622483 ABCA13Q86UQ4 5058 aa11.05□□□□□ -0.64
PCSK6-220ENST00000622483 TNXBP22105 4242 aa11.03□□□□□ -0.64
PCSK6-220ENST00000622483 KRTAP10-8P60410 259 aa11.01□□□□□ -0.65
PCSK6-220ENST00000622483 RPS29P62273 56 aaKnown RBP10.98□□□□□ -0.65
PCSK6-220ENST00000622483 HERC2O95714 4834 aa10.94□□□□□ -0.66
PCSK6-220ENST00000622483 LPAP08519 4548 aa10.88□□□□□ -0.67
PCSK6-220ENST00000622483 KRTAP12-1P59990 96 aa10.88□□□□□ -0.67
PCSK6-220ENST00000622483 MT1HL1P0DM35 61 aa10.83□□□□□ -0.68
PCSK6-220ENST00000622483 A0A0A0MQY5 61 aa10.81□□□□□ -0.68
PCSK6-220ENST00000622483 LRP2P98164 4655 aa10.79□□□□□ -0.68
PCSK6-220ENST00000622483 PCLOQ9Y6V0 5065 aa10.76□□□□□ -0.69
PCSK6-220ENST00000622483 XP32Q5T750 250 aa10.73□□□□□ -0.69
PCSK6-220ENST00000622483 BIRC6Q9NR09 4857 aa10.72□□□□□ -0.69
PCSK6-220ENST00000622483 HERC1Q15751 4861 aa10.72□□□□□ -0.69
PCSK6-220ENST00000622483 J3QL48 77 aa10.65□□□□□ -0.7
PCSK6-220ENST00000622483 MUC2Q02817 5179 aa10.61□□□□□ -0.71
PCSK6-220ENST00000622483 LUZP6Q538Z0 58 aa10.57□□□□□ -0.72
PCSK6-220ENST00000622483 PLAC4Q8WY50 150 aa10.5□□□□□ -0.73
PCSK6-220ENST00000622483 M0QZ58 72 aa10.47□□□□□ -0.73
PCSK6-220ENST00000622483 R4GN34 69 aa10.34□□□□□ -0.75
PCSK6-220ENST00000622483 RNF213Q63HN8 5207 aa10.28□□□□□ -0.76
PCSK6-220ENST00000622483 LORP23490 312 aaPredicted RBP10.22□□□□□ -0.77
PCSK6-220ENST00000622483 UBR4Q5T4S7 5183 aa10.17□□□□□ -0.78
PCSK6-220ENST00000622483 HMCN2Q8NDA2 5059 aa10.08□□□□□ -0.8
PCSK6-220ENST00000622483 FAT4Q6V0I7 4981 aa10.08□□□□□ -0.8
PCSK6-220ENST00000622483 KRTAP4-1Q9BYQ7 146 aa10.06□□□□□ -0.8
PCSK6-220ENST00000622483 CAMK2N1Q7Z7J9 78 aa9.98□□□□□ -0.81
PCSK6-220ENST00000622483 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
PCSK6-220ENST00000622483 MUC17Q685J3 4493 aa9.87□□□□□ -0.83
PCSK6-220ENST00000622483 PP632Q6XCG6 107 aa9.71□□□□□ -0.85
PCSK6-220ENST00000622483 KRTAP19-2Q3LHN2 52 aa9.48□□□□□ -0.89
PCSK6-220ENST00000622483 TNP1P09430 55 aa9.47□□□□□ -0.89
PCSK6-220ENST00000622483 M0R2T5 61 aa9.4□□□□□ -0.9
PCSK6-220ENST00000622483 FLGP20930 4061 aaPredicted RBP9.37□□□□□ -0.91
PCSK6-220ENST00000622483 SPRR5A0A1B0GTR4 108 aa9.32□□□□□ -0.92
PCSK6-220ENST00000622483 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
PCSK6-220ENST00000622483 MT1HP80294 61 aa9.14□□□□□ -0.95
PCSK6-220ENST00000622483 PRO2289Q9P1D8 64 aa9.07□□□□□ -0.96
PCSK6-220ENST00000622483 LCE3AQ5TA76 89 aa9.04□□□□□ -0.96
PCSK6-220ENST00000622483 FSIP2Q5CZC0 6907 aa8.98□□□□□ -0.97
PCSK6-220ENST00000622483 USH2AO75445 5202 aa8.96□□□□□ -0.98
PCSK6-220ENST00000622483 KRTAP23-1A1A580 65 aa8.96□□□□□ -0.98
PCSK6-220ENST00000622483 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
PCSK6-220ENST00000622483 MT1FP04733 61 aa8.87□□□□□ -0.99
PCSK6-220ENST00000622483 MT2AP02795 61 aa8.82□□□□□ -1
PCSK6-220ENST00000622483 KRTAP9-8Q9BYQ0 159 aa8.79□□□□□ -1
PCSK6-220ENST00000622483 INE1O15225 51 aa8.73□□□□□ -1.01
PCSK6-220ENST00000622483 KRTAP19-1Q8IUB9 90 aa8.69□□□□□ -1.02
PCSK6-220ENST00000622483 SPRR2GQ9BYE4 73 aa8.57□□□□□ -1.04
PCSK6-220ENST00000622483 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
PCSK6-220ENST00000622483 KRTAP8-1Q8IUC2 63 aa8.49□□□□□ -1.05
PCSK6-220ENST00000622483 KRTAP12-3P60328 96 aa8.48□□□□□ -1.05
PCSK6-220ENST00000622483 KRTAP9-3Q9BYQ3 159 aa8.42□□□□□ -1.06
PCSK6-220ENST00000622483 KRTAP10-12P60413 245 aa8.37□□□□□ -1.07
PCSK6-220ENST00000622483 KMT2DO14686 5537 aa8.36□□□□□ -1.07
PCSK6-220ENST00000622483 LCE2BO14633 110 aa8.34□□□□□ -1.07
PCSK6-220ENST00000622483 MT1BP07438 61 aa8.31□□□□□ -1.08
PCSK6-220ENST00000622483 KRTAP10-5P60370 271 aa8.27□□□□□ -1.08
PCSK6-220ENST00000622483 KRTAP10-7P60409 375 aaPredicted RBP8.26□□□□□ -1.09
PCSK6-220ENST00000622483 MT1XP80297 61 aa8.25□□□□□ -1.09
PCSK6-220ENST00000622483 KRTAP19-8Q3LI54 63 aa8.15□□□□□ -1.1
PCSK6-220ENST00000622483 SSPOA2VEC9 5147 aa8.14□□□□□ -1.11
PCSK6-220ENST00000622483 KRTAP19-5Q3LI72 72 aa7.98□□□□□ -1.13
PCSK6-220ENST00000622483 LCE3CQ5T5A8 94 aa7.95□□□□□ -1.14
PCSK6-220ENST00000622483 KRTAP9-6A8MVA2 160 aa7.94□□□□□ -1.14
PCSK6-220ENST00000622483 KRTAP4-7Q9BYR0 210 aa7.84□□□□□ -1.15
PCSK6-220ENST00000622483 KRTAP4-8A0A0G2JLE6 195 aa7.82□□□□□ -1.16
PCSK6-220ENST00000622483 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
PCSK6-220ENST00000622483 FCGBPQ9Y6R7 5405 aaPredicted RBP7.73□□□□□ -1.17
PCSK6-220ENST00000622483 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
PCSK6-220ENST00000622483 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
PCSK6-220ENST00000622483 KRTAP2-3P0C7H8 128 aa7.56□□□□□ -1.2
PCSK6-220ENST00000622483 KRTAP2-4Q9BYR9 128 aa7.56□□□□□ -1.2
PCSK6-220ENST00000622483 KRTAP2-1Q9BYU5 128 aa7.56□□□□□ -1.2
PCSK6-220ENST00000622483 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
PCSK6-220ENST00000622483 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms