RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 Q5VSD8 79 aa9.47□□□□□ -0.89
TRA2A-212ENST00000621813 CRIPTQ9P021 101 aa9.47□□□□□ -0.89
TRA2A-212ENST00000621813 KRTAP10-8P60410 259 aa9.43□□□□□ -0.9
TRA2A-212ENST00000621813 EPPK1P58107 5090 aaKnown RBP9.41□□□□□ -0.9
TRA2A-212ENST00000621813 Q8N1X5 172 aa9.41□□□□□ -0.9
TRA2A-212ENST00000621813 FLG2Q5D862 2391 aaPredicted RBP9.38□□□□□ -0.91
TRA2A-212ENST00000621813 HSPG2P98160 4391 aa9.37□□□□□ -0.91
TRA2A-212ENST00000621813 LUZP6Q538Z0 58 aa9.37□□□□□ -0.91
TRA2A-212ENST00000621813 RYR1P21817 5038 aa9.35□□□□□ -0.91
TRA2A-212ENST00000621813 TPRXLQ17RH7 258 aa9.33□□□□□ -0.92
TRA2A-212ENST00000621813 TNXBP22105 4242 aa9.31□□□□□ -0.92
TRA2A-212ENST00000621813 FAT3Q8TDW7 4589 aa9.28□□□□□ -0.92
TRA2A-212ENST00000621813 COX6B2Q6YFQ2 88 aa9.27□□□□□ -0.93
TRA2A-212ENST00000621813 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
TRA2A-212ENST00000621813 LRP1Q07954 4544 aaKnown RBP9.25□□□□□ -0.93
TRA2A-212ENST00000621813 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
TRA2A-212ENST00000621813 BIRC6Q9NR09 4857 aa9.23□□□□□ -0.93
TRA2A-212ENST00000621813 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
TRA2A-212ENST00000621813 MT1HL1P0DM35 61 aa9.15□□□□□ -0.95
TRA2A-212ENST00000621813 SEC61BP60468 96 aaKnown RBP9.15□□□□□ -0.95
TRA2A-212ENST00000621813 KRTAP3-1Q9BYR8 98 aa9.13□□□□□ -0.95
TRA2A-212ENST00000621813 XP32Q5T750 250 aa9.12□□□□□ -0.95
TRA2A-212ENST00000621813 DMBT1Q9UGM3 2413 aaPredicted RBP9.08□□□□□ -0.96
TRA2A-212ENST00000621813 HERC2O95714 4834 aa9.07□□□□□ -0.96
TRA2A-212ENST00000621813 KRTAP4-5Q9BYR2 181 aa9.04□□□□□ -0.96
TRA2A-212ENST00000621813 C10orf95Q9H7T3 257 aa9.04□□□□□ -0.96
TRA2A-212ENST00000621813 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
TRA2A-212ENST00000621813 ABCA13Q86UQ4 5058 aa8.89□□□□□ -0.99
TRA2A-212ENST00000621813 J3QL48 77 aa8.84□□□□□ -1
TRA2A-212ENST00000621813 S4R3F8 94 aa8.84□□□□□ -1
TRA2A-212ENST00000621813 A0A0D9SG42 100 aa8.82□□□□□ -1
TRA2A-212ENST00000621813 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
TRA2A-212ENST00000621813 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
TRA2A-212ENST00000621813 KRTAP13-4Q3LI77 160 aa8.78□□□□□ -1
TRA2A-212ENST00000621813 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
TRA2A-212ENST00000621813 LRP2P98164 4655 aa8.68□□□□□ -1.02
TRA2A-212ENST00000621813 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
TRA2A-212ENST00000621813 PCLOQ9Y6V0 5065 aa8.65□□□□□ -1.02
TRA2A-212ENST00000621813 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
TRA2A-212ENST00000621813 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
TRA2A-212ENST00000621813 LPAP08519 4548 aa8.61□□□□□ -1.03
TRA2A-212ENST00000621813 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
TRA2A-212ENST00000621813 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
TRA2A-212ENST00000621813 M0QZ58 72 aa8.41□□□□□ -1.06
TRA2A-212ENST00000621813 HERC1Q15751 4861 aa8.39□□□□□ -1.07
TRA2A-212ENST00000621813 KRTAP4-1Q9BYQ7 146 aa8.35□□□□□ -1.07
TRA2A-212ENST00000621813 HMCN2Q8NDA2 5059 aa8.32□□□□□ -1.08
TRA2A-212ENST00000621813 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
TRA2A-212ENST00000621813 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
TRA2A-212ENST00000621813 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
TRA2A-212ENST00000621813 R4GN34 69 aa8.16□□□□□ -1.1
TRA2A-212ENST00000621813 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
TRA2A-212ENST00000621813 INE1O15225 51 aa8□□□□□ -1.13
TRA2A-212ENST00000621813 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
TRA2A-212ENST00000621813 SPRR5A0A1B0GTR4 108 aa7.98□□□□□ -1.13
TRA2A-212ENST00000621813 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
TRA2A-212ENST00000621813 MUC2Q02817 5179 aa7.96□□□□□ -1.14
TRA2A-212ENST00000621813 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
TRA2A-212ENST00000621813 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
TRA2A-212ENST00000621813 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
TRA2A-212ENST00000621813 KRTAP23-1A1A580 65 aa7.8□□□□□ -1.16
TRA2A-212ENST00000621813 M0R2T5 61 aa7.68□□□□□ -1.18
TRA2A-212ENST00000621813 MT1HP80294 61 aa7.67□□□□□ -1.18
TRA2A-212ENST00000621813 FAT4Q6V0I7 4981 aa7.61□□□□□ -1.19
TRA2A-212ENST00000621813 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
TRA2A-212ENST00000621813 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
TRA2A-212ENST00000621813 TNP1P09430 55 aa7.49□□□□□ -1.21
TRA2A-212ENST00000621813 MT2AP02795 61 aa7.48□□□□□ -1.21
TRA2A-212ENST00000621813 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
TRA2A-212ENST00000621813 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.22
TRA2A-212ENST00000621813 MT1FP04733 61 aa7.44□□□□□ -1.22
TRA2A-212ENST00000621813 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
TRA2A-212ENST00000621813 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
TRA2A-212ENST00000621813 MT1BP07438 61 aa7.16□□□□□ -1.26
TRA2A-212ENST00000621813 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
TRA2A-212ENST00000621813 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
TRA2A-212ENST00000621813 MT1XP80297 61 aa7.04□□□□□ -1.28
TRA2A-212ENST00000621813 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
TRA2A-212ENST00000621813 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
TRA2A-212ENST00000621813 LCE2BO14633 110 aa6.87□□□□□ -1.31
TRA2A-212ENST00000621813 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
TRA2A-212ENST00000621813 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
TRA2A-212ENST00000621813 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
TRA2A-212ENST00000621813 USH2AO75445 5202 aa6.64□□□□□ -1.35
TRA2A-212ENST00000621813 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
TRA2A-212ENST00000621813 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
TRA2A-212ENST00000621813 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
TRA2A-212ENST00000621813 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
TRA2A-212ENST00000621813 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
TRA2A-212ENST00000621813 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
TRA2A-212ENST00000621813 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
TRA2A-212ENST00000621813 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
TRA2A-212ENST00000621813 KMT2DO14686 5537 aa6.3□□□□□ -1.4
TRA2A-212ENST00000621813 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
TRA2A-212ENST00000621813 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
TRA2A-212ENST00000621813 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
TRA2A-212ENST00000621813 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
TRA2A-212ENST00000621813 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
TRA2A-212ENST00000621813 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
TRA2A-212ENST00000621813 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms