RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
PCDH15-233ENST00000621708 ZNF469Q96JG9 3925 aaPredicted RBP3.88□□□□□ -1.79
PCDH15-233ENST00000621708 VPS13CQ709C8 3753 aa3.87□□□□□ -1.79
PCDH15-233ENST00000621708 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
PCDH15-233ENST00000621708 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
PCDH15-233ENST00000621708 DYNC1H1Q14204 4646 aaKnown RBP3.85□□□□□ -1.79
PCDH15-233ENST00000621708 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.8
PCDH15-233ENST00000621708 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
PCDH15-233ENST00000621708 ANK2Q01484 3957 aa3.82□□□□□ -1.8
PCDH15-233ENST00000621708 DNAH6Q9C0G6 4158 aa3.82□□□□□ -1.8
PCDH15-233ENST00000621708 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
PCDH15-233ENST00000621708 DNAH3Q8TD57 4116 aa3.82□□□□□ -1.8
PCDH15-233ENST00000621708 DNHD1Q96M86 4753 aa3.8□□□□□ -1.8
PCDH15-233ENST00000621708 FAT2Q9NYQ8 4349 aa3.77□□□□□ -1.81
PCDH15-233ENST00000621708 LRP1BQ9NZR2 4599 aa3.75□□□□□ -1.81
PCDH15-233ENST00000621708 STARD9Q9P2P6 4700 aa3.75□□□□□ -1.81
PCDH15-233ENST00000621708 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
PCDH15-233ENST00000621708 SACSQ9NZJ4 4579 aa3.74□□□□□ -1.81
PCDH15-233ENST00000621708 MT1HP80294 61 aa3.73□□□□□ -1.81
PCDH15-233ENST00000621708 DNAH8Q96JB1 4490 aa3.71□□□□□ -1.82
PCDH15-233ENST00000621708 LORP23490 312 aaPredicted RBP3.69□□□□□ -1.82
PCDH15-233ENST00000621708 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
PCDH15-233ENST00000621708 PRKDCP78527 4128 aaKnown RBP3.67□□□□□ -1.82
PCDH15-233ENST00000621708 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
PCDH15-233ENST00000621708 MT2AP02795 61 aa3.65□□□□□ -1.83
PCDH15-233ENST00000621708 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
PCDH15-233ENST00000621708 CMYA5Q8N3K9 4069 aa3.61□□□□□ -1.83
PCDH15-233ENST00000621708 FAT1Q14517 4588 aa3.6□□□□□ -1.83
PCDH15-233ENST00000621708 RYR1P21817 5038 aa3.59□□□□□ -1.83
PCDH15-233ENST00000621708 RYR2Q92736 4967 aa3.58□□□□□ -1.84
PCDH15-233ENST00000621708 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
PCDH15-233ENST00000621708 DNAH7Q8WXX0 4024 aa3.56□□□□□ -1.84
PCDH15-233ENST00000621708 MT1FP04733 61 aa3.55□□□□□ -1.84
PCDH15-233ENST00000621708 KRTAP17-1Q9BYP8 105 aa3.54□□□□□ -1.84
PCDH15-233ENST00000621708 RYR3Q15413 4870 aa3.53□□□□□ -1.84
PCDH15-233ENST00000621708 HERC1Q15751 4861 aa3.52□□□□□ -1.85
PCDH15-233ENST00000621708 INE1O15225 51 aa3.51□□□□□ -1.85
PCDH15-233ENST00000621708 APOBP04114 4563 aaKnown RBP3.51□□□□□ -1.85
PCDH15-233ENST00000621708 KMT2AQ03164 3969 aa3.51□□□□□ -1.85
PCDH15-233ENST00000621708 HSPG2P98160 4391 aa3.5□□□□□ -1.85
PCDH15-233ENST00000621708 CSMD3Q7Z407 3707 aa3.5□□□□□ -1.85
PCDH15-233ENST00000621708 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
PCDH15-233ENST00000621708 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
PCDH15-233ENST00000621708 VPS13BQ7Z7G8 4022 aa3.48□□□□□ -1.85
PCDH15-233ENST00000621708 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
PCDH15-233ENST00000621708 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
PCDH15-233ENST00000621708 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
PCDH15-233ENST00000621708 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
PCDH15-233ENST00000621708 HECTD4Q9Y4D8 3996 aa3.41□□□□□ -1.86
PCDH15-233ENST00000621708 MYCBP2O75592 4640 aa3.4□□□□□ -1.87
PCDH15-233ENST00000621708 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
PCDH15-233ENST00000621708 LYSTQ99698 3801 aa3.37□□□□□ -1.87
PCDH15-233ENST00000621708 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
PCDH15-233ENST00000621708 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
PCDH15-233ENST00000621708 LCE2CQ5TA81 110 aa3.34□□□□□ -1.87
PCDH15-233ENST00000621708 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.88
PCDH15-233ENST00000621708 LRP1Q07954 4544 aaKnown RBP3.33□□□□□ -1.88
PCDH15-233ENST00000621708 FRAS1Q86XX4 4008 aa3.33□□□□□ -1.88
PCDH15-233ENST00000621708 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
PCDH15-233ENST00000621708 HERC2O95714 4834 aa3.32□□□□□ -1.88
PCDH15-233ENST00000621708 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
PCDH15-233ENST00000621708 HYDINQ4G0P3 5121 aa3.29□□□□□ -1.88
PCDH15-233ENST00000621708 MT1BP07438 61 aa3.28□□□□□ -1.88
PCDH15-233ENST00000621708 KRTAP9-3Q9BYQ3 159 aa3.27□□□□□ -1.89
PCDH15-233ENST00000621708 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
PCDH15-233ENST00000621708 PKD1P98161 4303 aa3.27□□□□□ -1.89
PCDH15-233ENST00000621708 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
PCDH15-233ENST00000621708 MT1XP80297 61 aa3.26□□□□□ -1.89
PCDH15-233ENST00000621708 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
PCDH15-233ENST00000621708 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
PCDH15-233ENST00000621708 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
PCDH15-233ENST00000621708 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
PCDH15-233ENST00000621708 TNXBP22105 4242 aa3.17□□□□□ -1.9
PCDH15-233ENST00000621708 SPRR2EP22531 72 aa3.15□□□□□ -1.9
PCDH15-233ENST00000621708 SPRR2BP35325 72 aa3.15□□□□□ -1.9
PCDH15-233ENST00000621708 SPRR2AP35326 72 aa3.15□□□□□ -1.9
PCDH15-233ENST00000621708 MT1GP13640 62 aa3.11□□□□□ -1.91
PCDH15-233ENST00000621708 LRP2P98164 4655 aa3.09□□□□□ -1.91
PCDH15-233ENST00000621708 LCE2BO14633 110 aa3.08□□□□□ -1.92
PCDH15-233ENST00000621708 KMT2CQ8NEZ4 4911 aaKnown RBP3.07□□□□□ -1.92
PCDH15-233ENST00000621708 SPRR2DP22532 72 aa3.06□□□□□ -1.92
PCDH15-233ENST00000621708 LCE2DQ5TA82 110 aaPredicted RBP3.06□□□□□ -1.92
PCDH15-233ENST00000621708 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
PCDH15-233ENST00000621708 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
PCDH15-233ENST00000621708 LCE2AQ5TA79 106 aaPredicted RBP3.04□□□□□ -1.92
PCDH15-233ENST00000621708 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
PCDH15-233ENST00000621708 LPAP08519 4548 aa3.01□□□□□ -1.93
PCDH15-233ENST00000621708 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
PCDH15-233ENST00000621708 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
PCDH15-233ENST00000621708 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
PCDH15-233ENST00000621708 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
PCDH15-233ENST00000621708 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
PCDH15-233ENST00000621708 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
PCDH15-233ENST00000621708 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
PCDH15-233ENST00000621708 MT1EP04732 61 aa2.96□□□□□ -1.94
PCDH15-233ENST00000621708 MT1LQ93083 61 aa2.95□□□□□ -1.94
PCDH15-233ENST00000621708 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
PCDH15-233ENST00000621708 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
PCDH15-233ENST00000621708 FAT4Q6V0I7 4981 aa2.86□□□□□ -1.95
PCDH15-233ENST00000621708 MT1MQ8N339 61 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms