RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 DYNC1H1Q14204 4646 aaKnown RBP8.97□□□□□ -0.97
LHX3-203ENST00000619587 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.98
LHX3-203ENST00000619587 C10orf95Q9H7T3 257 aa8.94□□□□□ -0.98
LHX3-203ENST00000619587 NDUFAF8A1L188 74 aa8.93□□□□□ -0.98
LHX3-203ENST00000619587 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
LHX3-203ENST00000619587 KRTAP15-1Q3LI76 137 aa8.89□□□□□ -0.99
LHX3-203ENST00000619587 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
LHX3-203ENST00000619587 HSPG2P98160 4391 aa8.86□□□□□ -0.99
LHX3-203ENST00000619587 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
LHX3-203ENST00000619587 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1
LHX3-203ENST00000619587 KRTAP10-8P60410 259 aa8.76□□□□□ -1.01
LHX3-203ENST00000619587 MYCBP2O75592 4640 aa8.76□□□□□ -1.01
LHX3-203ENST00000619587 S4R3F8 94 aa8.75□□□□□ -1.01
LHX3-203ENST00000619587 KRTAP12-2P59991 146 aa8.74□□□□□ -1.01
LHX3-203ENST00000619587 LRP1Q07954 4544 aaKnown RBP8.74□□□□□ -1.01
LHX3-203ENST00000619587 TNXBP22105 4242 aa8.64□□□□□ -1.03
LHX3-203ENST00000619587 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
LHX3-203ENST00000619587 XP32Q5T750 250 aa8.56□□□□□ -1.04
LHX3-203ENST00000619587 A0A1B0GVY2 172 aa8.52□□□□□ -1.05
LHX3-203ENST00000619587 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
LHX3-203ENST00000619587 LPAP08519 4548 aa8.49□□□□□ -1.05
LHX3-203ENST00000619587 KMT2CQ8NEZ4 4911 aaKnown RBP8.42□□□□□ -1.06
LHX3-203ENST00000619587 RYR2Q92736 4967 aa8.39□□□□□ -1.07
LHX3-203ENST00000619587 A0A0A0MQY5 61 aa8.38□□□□□ -1.07
LHX3-203ENST00000619587 M0QZ58 72 aa8.36□□□□□ -1.07
LHX3-203ENST00000619587 LRP2P98164 4655 aa8.34□□□□□ -1.07
LHX3-203ENST00000619587 LUZP6Q538Z0 58 aa8.26□□□□□ -1.09
LHX3-203ENST00000619587 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
LHX3-203ENST00000619587 Q5VSD8 79 aa8.23□□□□□ -1.09
LHX3-203ENST00000619587 R4GN34 69 aa8.14□□□□□ -1.11
LHX3-203ENST00000619587 KRTAP17-1Q9BYP8 105 aa8.14□□□□□ -1.11
LHX3-203ENST00000619587 RYR3Q15413 4870 aa8.13□□□□□ -1.11
LHX3-203ENST00000619587 RYR1P21817 5038 aa8.11□□□□□ -1.11
LHX3-203ENST00000619587 MT1HL1P0DM35 61 aa8.09□□□□□ -1.11
LHX3-203ENST00000619587 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
LHX3-203ENST00000619587 KIAA1109Q2LD37 5005 aa8.01□□□□□ -1.13
LHX3-203ENST00000619587 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
LHX3-203ENST00000619587 MUC17Q685J3 4493 aa7.9□□□□□ -1.15
LHX3-203ENST00000619587 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
LHX3-203ENST00000619587 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
LHX3-203ENST00000619587 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
LHX3-203ENST00000619587 KRTAP4-1Q9BYQ7 146 aa7.74□□□□□ -1.17
LHX3-203ENST00000619587 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
LHX3-203ENST00000619587 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
LHX3-203ENST00000619587 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.19
LHX3-203ENST00000619587 SPRR5A0A1B0GTR4 108 aa7.56□□□□□ -1.2
LHX3-203ENST00000619587 MUC2Q02817 5179 aa7.53□□□□□ -1.2
LHX3-203ENST00000619587 TNP1P09430 55 aa7.51□□□□□ -1.21
LHX3-203ENST00000619587 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
LHX3-203ENST00000619587 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
LHX3-203ENST00000619587 HERC2O95714 4834 aa7.37□□□□□ -1.23
LHX3-203ENST00000619587 HERC1Q15751 4861 aa7.36□□□□□ -1.23
LHX3-203ENST00000619587 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
LHX3-203ENST00000619587 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
LHX3-203ENST00000619587 J3QL48 77 aa7.22□□□□□ -1.25
LHX3-203ENST00000619587 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
LHX3-203ENST00000619587 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
LHX3-203ENST00000619587 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
LHX3-203ENST00000619587 INE1O15225 51 aa7.1□□□□□ -1.27
LHX3-203ENST00000619587 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
LHX3-203ENST00000619587 SPRR2GQ9BYE4 73 aa7.06□□□□□ -1.28
LHX3-203ENST00000619587 LCE2CQ5TA81 110 aa6.96□□□□□ -1.29
LHX3-203ENST00000619587 HMCN2Q8NDA2 5059 aa6.95□□□□□ -1.3
LHX3-203ENST00000619587 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
LHX3-203ENST00000619587 UBR4Q5T4S7 5183 aa6.87□□□□□ -1.31
LHX3-203ENST00000619587 M0R2T5 61 aa6.83□□□□□ -1.32
LHX3-203ENST00000619587 MT1FP04733 61 aa6.8□□□□□ -1.32
LHX3-203ENST00000619587 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
LHX3-203ENST00000619587 MT2AP02795 61 aa6.75□□□□□ -1.33
LHX3-203ENST00000619587 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
LHX3-203ENST00000619587 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
LHX3-203ENST00000619587 MT1HP80294 61 aa6.73□□□□□ -1.33
LHX3-203ENST00000619587 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
LHX3-203ENST00000619587 MT1XP80297 61 aa6.7□□□□□ -1.34
LHX3-203ENST00000619587 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
LHX3-203ENST00000619587 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
LHX3-203ENST00000619587 MT1BP07438 61 aa6.64□□□□□ -1.35
LHX3-203ENST00000619587 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
LHX3-203ENST00000619587 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
LHX3-203ENST00000619587 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
LHX3-203ENST00000619587 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
LHX3-203ENST00000619587 KMT2DO14686 5537 aa6.35□□□□□ -1.39
LHX3-203ENST00000619587 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
LHX3-203ENST00000619587 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
LHX3-203ENST00000619587 USH2AO75445 5202 aa6.2□□□□□ -1.42
LHX3-203ENST00000619587 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
LHX3-203ENST00000619587 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
LHX3-203ENST00000619587 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
LHX3-203ENST00000619587 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
LHX3-203ENST00000619587 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
LHX3-203ENST00000619587 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
LHX3-203ENST00000619587 LCE2BO14633 110 aa6.07□□□□□ -1.44
LHX3-203ENST00000619587 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
LHX3-203ENST00000619587 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
LHX3-203ENST00000619587 MT1LQ93083 61 aa5.81□□□□□ -1.48
LHX3-203ENST00000619587 MT1EP04732 61 aa5.74□□□□□ -1.49
LHX3-203ENST00000619587 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
LHX3-203ENST00000619587 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
LHX3-203ENST00000619587 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
LHX3-203ENST00000619587 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms