RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 MYCBP2O75592 4640 aa15.81■□□□□ 0.12
KHSRP-213ENST00000619396 COX6B2Q6YFQ2 88 aa15.8■□□□□ 0.12
KHSRP-213ENST00000619396 A0A1B0GU33 70 aa15.75■□□□□ 0.11
KHSRP-213ENST00000619396 EPPK1P58107 5090 aaKnown RBP15.74■□□□□ 0.11
KHSRP-213ENST00000619396 H1FX-AS1Q4G0G2 97 aa15.71■□□□□ 0.11
KHSRP-213ENST00000619396 MT1HL1P0DM35 61 aa15.62■□□□□ 0.09
KHSRP-213ENST00000619396 CSAG1Q6PB30 78 aa15.55■□□□□ 0.08
KHSRP-213ENST00000619396 XP32Q5T750 250 aa15.53■□□□□ 0.08
KHSRP-213ENST00000619396 RPL37P61927 97 aaKnown RBP15.5■□□□□ 0.07
KHSRP-213ENST00000619396 LINC01554Q52M75 96 aa15.5■□□□□ 0.07
KHSRP-213ENST00000619396 KRTAP3-3Q9BYR6 98 aa15.44■□□□□ 0.06
KHSRP-213ENST00000619396 KRTAP4-5Q9BYR2 181 aa15.33■□□□□ 0.05
KHSRP-213ENST00000619396 KRTAP10-6P60371 365 aaPredicted RBP15.33■□□□□ 0.04
KHSRP-213ENST00000619396 LPAP08519 4548 aa15.25■□□□□ 0.03
KHSRP-213ENST00000619396 KRTAP3-2Q9BYR7 98 aa15.23■□□□□ 0.03
KHSRP-213ENST00000619396 ABCA13Q86UQ4 5058 aa15.21■□□□□ 0.03
KHSRP-213ENST00000619396 LRP2P98164 4655 aa15.21■□□□□ 0.03
KHSRP-213ENST00000619396 S4R3F8 94 aa15.2■□□□□ 0.02
KHSRP-213ENST00000619396 K7ERS5 55 aa15.19■□□□□ 0.02
KHSRP-213ENST00000619396 KRTAP25-1Q3LHN0 102 aa15.16■□□□□ 0.02
KHSRP-213ENST00000619396 KRTAP13-4Q3LI77 160 aa15.15■□□□□ 0.02
KHSRP-213ENST00000619396 TPRXLQ17RH7 258 aa15.04■□□□□ -0
KHSRP-213ENST00000619396 P0C880 135 aa14.97□□□□□ -0.01
KHSRP-213ENST00000619396 A0A0D9SG42 100 aa14.94□□□□□ -0.02
KHSRP-213ENST00000619396 ROMO1P60602 79 aa14.92□□□□□ -0.02
KHSRP-213ENST00000619396 CRIPTQ9P021 101 aa14.88□□□□□ -0.03
KHSRP-213ENST00000619396 HERC2O95714 4834 aa14.79□□□□□ -0.04
KHSRP-213ENST00000619396 J3QL48 77 aa14.67□□□□□ -0.06
KHSRP-213ENST00000619396 KRTAP12-2P59991 146 aa14.64□□□□□ -0.07
KHSRP-213ENST00000619396 KRTAP12-1P59990 96 aa14.56□□□□□ -0.08
KHSRP-213ENST00000619396 BIRC6Q9NR09 4857 aa14.56□□□□□ -0.08
KHSRP-213ENST00000619396 MUC17Q685J3 4493 aa14.55□□□□□ -0.08
KHSRP-213ENST00000619396 M0QZ58 72 aa14.49□□□□□ -0.09
KHSRP-213ENST00000619396 KRTAP4-1Q9BYQ7 146 aa14.49□□□□□ -0.09
KHSRP-213ENST00000619396 SEC61BP60468 96 aaKnown RBP14.46□□□□□ -0.09
KHSRP-213ENST00000619396 SPINT4Q6UDR6 99 aa14.43□□□□□ -0.1
KHSRP-213ENST00000619396 C10orf95Q9H7T3 257 aa14.38□□□□□ -0.11
KHSRP-213ENST00000619396 H3BS24 57 aa14.26□□□□□ -0.13
KHSRP-213ENST00000619396 MUC2Q02817 5179 aa14.15□□□□□ -0.14
KHSRP-213ENST00000619396 HERC1Q15751 4861 aa14.15□□□□□ -0.14
KHSRP-213ENST00000619396 PCLOQ9Y6V0 5065 aa14.15□□□□□ -0.14
KHSRP-213ENST00000619396 KRTAP19-2Q3LHN2 52 aa14.11□□□□□ -0.15
KHSRP-213ENST00000619396 R4GN34 69 aa14.08□□□□□ -0.16
KHSRP-213ENST00000619396 LORP23490 312 aaPredicted RBP14□□□□□ -0.17
KHSRP-213ENST00000619396 HMCN2Q8NDA2 5059 aa13.94□□□□□ -0.18
KHSRP-213ENST00000619396 KRTAP15-1Q3LI76 137 aa13.86□□□□□ -0.19
KHSRP-213ENST00000619396 FLGP20930 4061 aaPredicted RBP13.78□□□□□ -0.2
KHSRP-213ENST00000619396 FAT4Q6V0I7 4981 aa13.5□□□□□ -0.25
KHSRP-213ENST00000619396 LCE2CQ5TA81 110 aa13.45□□□□□ -0.26
KHSRP-213ENST00000619396 NDUFAF8A1L188 74 aa13.43□□□□□ -0.26
KHSRP-213ENST00000619396 UBR4Q5T4S7 5183 aa13.36□□□□□ -0.27
KHSRP-213ENST00000619396 CAMK2N1Q7Z7J9 78 aa13.35□□□□□ -0.27
KHSRP-213ENST00000619396 RNF213Q63HN8 5207 aa13.33□□□□□ -0.28
KHSRP-213ENST00000619396 PLAC4Q8WY50 150 aa13.22□□□□□ -0.29
KHSRP-213ENST00000619396 PP632Q6XCG6 107 aa13.2□□□□□ -0.3
KHSRP-213ENST00000619396 MT1HP80294 61 aa13.1□□□□□ -0.31
KHSRP-213ENST00000619396 M0R2T5 61 aa13.08□□□□□ -0.32
KHSRP-213ENST00000619396 TNP1P09430 55 aa12.9□□□□□ -0.34
KHSRP-213ENST00000619396 KRTAP19-1Q8IUB9 90 aa12.85□□□□□ -0.35
KHSRP-213ENST00000619396 KRTAP23-1A1A580 65 aa12.83□□□□□ -0.36
KHSRP-213ENST00000619396 SPRR2GQ9BYE4 73 aa12.83□□□□□ -0.36
KHSRP-213ENST00000619396 MT1FP04733 61 aa12.8□□□□□ -0.36
KHSRP-213ENST00000619396 MT2AP02795 61 aa12.78□□□□□ -0.36
KHSRP-213ENST00000619396 KRTAP9-8Q9BYQ0 159 aa12.74□□□□□ -0.37
KHSRP-213ENST00000619396 KRTAP10-10P60014 251 aa12.73□□□□□ -0.37
KHSRP-213ENST00000619396 LUZP6Q538Z0 58 aa12.53□□□□□ -0.4
KHSRP-213ENST00000619396 SPRR5A0A1B0GTR4 108 aa12.41□□□□□ -0.42
KHSRP-213ENST00000619396 KRTAP19-8Q3LI54 63 aa12.32□□□□□ -0.44
KHSRP-213ENST00000619396 MT1BP07438 61 aa12.26□□□□□ -0.45
KHSRP-213ENST00000619396 LCE3AQ5TA76 89 aa12.25□□□□□ -0.45
KHSRP-213ENST00000619396 KRTAP9-3Q9BYQ3 159 aa12.22□□□□□ -0.45
KHSRP-213ENST00000619396 KRTAP10-5P60370 271 aa12.06□□□□□ -0.48
KHSRP-213ENST00000619396 MT1XP80297 61 aa12.06□□□□□ -0.48
KHSRP-213ENST00000619396 KRTAP8-1Q8IUC2 63 aa11.99□□□□□ -0.49
KHSRP-213ENST00000619396 A0A0A0MQY5 61 aa11.94□□□□□ -0.5
KHSRP-213ENST00000619396 LCE2AQ5TA79 106 aaPredicted RBP11.9□□□□□ -0.5
KHSRP-213ENST00000619396 LCE2BO14633 110 aa11.84□□□□□ -0.51
KHSRP-213ENST00000619396 KRTAP10-12P60413 245 aa11.74□□□□□ -0.53
KHSRP-213ENST00000619396 KRTAP10-7P60409 375 aaPredicted RBP11.72□□□□□ -0.53
KHSRP-213ENST00000619396 USH2AO75445 5202 aa11.71□□□□□ -0.54
KHSRP-213ENST00000619396 KRTAP12-3P60328 96 aa11.66□□□□□ -0.54
KHSRP-213ENST00000619396 PRO2289Q9P1D8 64 aa11.55□□□□□ -0.56
KHSRP-213ENST00000619396 KMT2DO14686 5537 aa11.31□□□□□ -0.6
KHSRP-213ENST00000619396 KRTAP19-5Q3LI72 72 aa11.18□□□□□ -0.62
KHSRP-213ENST00000619396 KRTAP4-8A0A0G2JLE6 195 aa11.15□□□□□ -0.63
KHSRP-213ENST00000619396 KRTAP4-8Q9BYQ9 185 aa11.15□□□□□ -0.63
KHSRP-213ENST00000619396 SSPOA2VEC9 5147 aa11.01□□□□□ -0.65
KHSRP-213ENST00000619396 LCE3CQ5T5A8 94 aa11□□□□□ -0.65
KHSRP-213ENST00000619396 FSIP2Q5CZC0 6907 aa10.86□□□□□ -0.67
KHSRP-213ENST00000619396 INE1O15225 51 aa10.86□□□□□ -0.67
KHSRP-213ENST00000619396 KRTAP19-7Q3SYF9 63 aa10.75□□□□□ -0.69
KHSRP-213ENST00000619396 KRTAP19-6Q3LI70 58 aa10.69□□□□□ -0.7
KHSRP-213ENST00000619396 KRTAP9-6A8MVA2 160 aa10.64□□□□□ -0.71
KHSRP-213ENST00000619396 KRTAP4-7Q9BYR0 210 aa10.49□□□□□ -0.73
KHSRP-213ENST00000619396 MT1EP04732 61 aa10.46□□□□□ -0.74
KHSRP-213ENST00000619396 KRTAP19-4Q3LI73 84 aa10.43□□□□□ -0.74
KHSRP-213ENST00000619396 MT1LQ93083 61 aa10.39□□□□□ -0.75
KHSRP-213ENST00000619396 FCGBPQ9Y6R7 5405 aaPredicted RBP10.32□□□□□ -0.76
KHSRP-213ENST00000619396 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
KHSRP-213ENST00000619396 KRTAP2-3P0C7H8 128 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms