RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 TPRXLQ17RH7 258 aa8.61□□□□□ -1.03
SEMA3B-214ENST00000619119 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
SEMA3B-214ENST00000619119 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
SEMA3B-214ENST00000619119 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
SEMA3B-214ENST00000619119 KRTAP15-1Q3LI76 137 aa8.57□□□□□ -1.04
SEMA3B-214ENST00000619119 LRP1Q07954 4544 aaKnown RBP8.53□□□□□ -1.04
SEMA3B-214ENST00000619119 HSPG2P98160 4391 aa8.53□□□□□ -1.04
SEMA3B-214ENST00000619119 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.05
SEMA3B-214ENST00000619119 KIAA1109Q2LD37 5005 aa8.48□□□□□ -1.05
SEMA3B-214ENST00000619119 Q5VSD8 79 aa8.47□□□□□ -1.05
SEMA3B-214ENST00000619119 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
SEMA3B-214ENST00000619119 J3QL48 77 aa8.47□□□□□ -1.05
SEMA3B-214ENST00000619119 A0A0D9SG42 100 aa8.46□□□□□ -1.06
SEMA3B-214ENST00000619119 RYR1P21817 5038 aa8.44□□□□□ -1.06
SEMA3B-214ENST00000619119 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
SEMA3B-214ENST00000619119 C9orf92A6NGG3 77 aa8.43□□□□□ -1.06
SEMA3B-214ENST00000619119 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
SEMA3B-214ENST00000619119 RPL37P61927 97 aaKnown RBP8.42□□□□□ -1.06
SEMA3B-214ENST00000619119 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
SEMA3B-214ENST00000619119 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
SEMA3B-214ENST00000619119 RPS29P62273 56 aaKnown RBP8.38□□□□□ -1.07
SEMA3B-214ENST00000619119 MYCBP2O75592 4640 aa8.37□□□□□ -1.07
SEMA3B-214ENST00000619119 TNXBP22105 4242 aa8.34□□□□□ -1.07
SEMA3B-214ENST00000619119 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
SEMA3B-214ENST00000619119 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
SEMA3B-214ENST00000619119 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
SEMA3B-214ENST00000619119 KRTAP10-6P60371 365 aaPredicted RBP8.16□□□□□ -1.1
SEMA3B-214ENST00000619119 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
SEMA3B-214ENST00000619119 S4R3F8 94 aa8.14□□□□□ -1.11
SEMA3B-214ENST00000619119 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
SEMA3B-214ENST00000619119 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
SEMA3B-214ENST00000619119 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
SEMA3B-214ENST00000619119 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
SEMA3B-214ENST00000619119 XP32Q5T750 250 aa8□□□□□ -1.13
SEMA3B-214ENST00000619119 LPAP08519 4548 aa7.96□□□□□ -1.14
SEMA3B-214ENST00000619119 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
SEMA3B-214ENST00000619119 LRP2P98164 4655 aa7.94□□□□□ -1.14
SEMA3B-214ENST00000619119 HERC2O95714 4834 aa7.93□□□□□ -1.14
SEMA3B-214ENST00000619119 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
SEMA3B-214ENST00000619119 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
SEMA3B-214ENST00000619119 BIRC6Q9NR09 4857 aa7.83□□□□□ -1.16
SEMA3B-214ENST00000619119 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
SEMA3B-214ENST00000619119 HERC1Q15751 4861 aa7.62□□□□□ -1.19
SEMA3B-214ENST00000619119 M0QZ58 72 aa7.56□□□□□ -1.2
SEMA3B-214ENST00000619119 MUC2Q02817 5179 aa7.55□□□□□ -1.2
SEMA3B-214ENST00000619119 CAMK2N1Q7Z7J9 78 aa7.55□□□□□ -1.2
SEMA3B-214ENST00000619119 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
SEMA3B-214ENST00000619119 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
SEMA3B-214ENST00000619119 HMCN2Q8NDA2 5059 aa7.41□□□□□ -1.22
SEMA3B-214ENST00000619119 R4GN34 69 aa7.36□□□□□ -1.23
SEMA3B-214ENST00000619119 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
SEMA3B-214ENST00000619119 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
SEMA3B-214ENST00000619119 UBR4Q5T4S7 5183 aa7.22□□□□□ -1.25
SEMA3B-214ENST00000619119 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
SEMA3B-214ENST00000619119 FAT4Q6V0I7 4981 aa7.21□□□□□ -1.26
SEMA3B-214ENST00000619119 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.26
SEMA3B-214ENST00000619119 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.27
SEMA3B-214ENST00000619119 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
SEMA3B-214ENST00000619119 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
SEMA3B-214ENST00000619119 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
SEMA3B-214ENST00000619119 M0R2T5 61 aa6.94□□□□□ -1.3
SEMA3B-214ENST00000619119 TNP1P09430 55 aa6.86□□□□□ -1.31
SEMA3B-214ENST00000619119 MT1HP80294 61 aa6.84□□□□□ -1.31
SEMA3B-214ENST00000619119 INE1O15225 51 aa6.83□□□□□ -1.32
SEMA3B-214ENST00000619119 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
SEMA3B-214ENST00000619119 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
SEMA3B-214ENST00000619119 MT1FP04733 61 aa6.64□□□□□ -1.35
SEMA3B-214ENST00000619119 MT2AP02795 61 aa6.63□□□□□ -1.35
SEMA3B-214ENST00000619119 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
SEMA3B-214ENST00000619119 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
SEMA3B-214ENST00000619119 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
SEMA3B-214ENST00000619119 LCE3AQ5TA76 89 aa6.46□□□□□ -1.38
SEMA3B-214ENST00000619119 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
SEMA3B-214ENST00000619119 USH2AO75445 5202 aa6.31□□□□□ -1.4
SEMA3B-214ENST00000619119 MT1BP07438 61 aa6.3□□□□□ -1.4
SEMA3B-214ENST00000619119 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
SEMA3B-214ENST00000619119 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
SEMA3B-214ENST00000619119 LCE2BO14633 110 aa6.19□□□□□ -1.42
SEMA3B-214ENST00000619119 MT1XP80297 61 aa6.17□□□□□ -1.42
SEMA3B-214ENST00000619119 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
SEMA3B-214ENST00000619119 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
SEMA3B-214ENST00000619119 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
SEMA3B-214ENST00000619119 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
SEMA3B-214ENST00000619119 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
SEMA3B-214ENST00000619119 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
SEMA3B-214ENST00000619119 KMT2DO14686 5537 aa5.98□□□□□ -1.45
SEMA3B-214ENST00000619119 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
SEMA3B-214ENST00000619119 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
SEMA3B-214ENST00000619119 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
SEMA3B-214ENST00000619119 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.49
SEMA3B-214ENST00000619119 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
SEMA3B-214ENST00000619119 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
SEMA3B-214ENST00000619119 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
SEMA3B-214ENST00000619119 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
SEMA3B-214ENST00000619119 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
SEMA3B-214ENST00000619119 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
SEMA3B-214ENST00000619119 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
SEMA3B-214ENST00000619119 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
SEMA3B-214ENST00000619119 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
SEMA3B-214ENST00000619119 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms