RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 CEP295Q9C0D2 2601 aa1.58□□□□□ -2.16
SMC5-204ENST00000618375 UNC79Q9P2D8 2635 aa1.58□□□□□ -2.16
SMC5-204ENST00000618375 DNAH10Q8IVF4 4471 aa1.58□□□□□ -2.16
SMC5-204ENST00000618375 MXRA5Q9NR99 2828 aa1.58□□□□□ -2.16
SMC5-204ENST00000618375 BAHCC1Q9P281 2608 aa1.57□□□□□ -2.16
SMC5-204ENST00000618375 MUC3AQ02505 3323 aa1.57□□□□□ -2.16
SMC5-204ENST00000618375 MYO9AB2RTY4 2548 aa1.57□□□□□ -2.16
SMC5-204ENST00000618375 MTORP42345 2549 aa1.57□□□□□ -2.16
SMC5-204ENST00000618375 SMR3AQ99954 134 aa1.57□□□□□ -2.16
SMC5-204ENST00000618375 CSMD2Q7Z408 3487 aa1.56□□□□□ -2.16
SMC5-204ENST00000618375 HIVEP1P15822 2718 aa1.56□□□□□ -2.16
SMC5-204ENST00000618375 DNAH9Q9NYC9 4486 aa1.56□□□□□ -2.16
SMC5-204ENST00000618375 HECTD1Q9ULT8 2610 aa1.56□□□□□ -2.16
SMC5-204ENST00000618375 PIEZO1Q92508 2521 aa1.56□□□□□ -2.16
SMC5-204ENST00000618375 PDZD2O15018 2839 aa1.55□□□□□ -2.16
SMC5-204ENST00000618375 NOTCH2Q04721 2471 aa1.55□□□□□ -2.16
SMC5-204ENST00000618375 TGP01266 2768 aa1.55□□□□□ -2.16
SMC5-204ENST00000618375 COL7A1Q02388 2944 aa1.54□□□□□ -2.16
SMC5-204ENST00000618375 PKD1L2Q7Z442 2459 aa1.53□□□□□ -2.16
SMC5-204ENST00000618375 TTC28Q96AY4 2481 aa1.53□□□□□ -2.16
SMC5-204ENST00000618375 CHD8Q9HCK8 2581 aa1.53□□□□□ -2.16
SMC5-204ENST00000618375 SACSQ9NZJ4 4579 aa1.53□□□□□ -2.16
SMC5-204ENST00000618375 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
SMC5-204ENST00000618375 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
SMC5-204ENST00000618375 TNP1P09430 55 aa1.51□□□□□ -2.17
SMC5-204ENST00000618375 FBN2P35556 2912 aa1.51□□□□□ -2.17
SMC5-204ENST00000618375 PKHD1L1Q86WI1 4243 aa1.51□□□□□ -2.17
SMC5-204ENST00000618375 KMT2AQ03164 3969 aa1.5□□□□□ -2.17
SMC5-204ENST00000618375 EPG5Q9HCE0 2579 aa1.5□□□□□ -2.17
SMC5-204ENST00000618375 CFAP46Q8IYW2 2715 aa1.5□□□□□ -2.17
SMC5-204ENST00000618375 ZANQ9Y493 2812 aa1.49□□□□□ -2.17
SMC5-204ENST00000618375 ACANP16112 2415 aa1.49□□□□□ -2.17
SMC5-204ENST00000618375 ITPR3Q14573 2671 aa1.49□□□□□ -2.17
SMC5-204ENST00000618375 SETD2Q9BYW2 2564 aaPredicted RBP1.49□□□□□ -2.17
SMC5-204ENST00000618375 FLGP20930 4061 aaPredicted RBP1.49□□□□□ -2.17
SMC5-204ENST00000618375 FBN3Q75N90 2809 aa1.48□□□□□ -2.17
SMC5-204ENST00000618375 LRRK2Q5S007 2527 aa1.48□□□□□ -2.17
SMC5-204ENST00000618375 STAB2Q8WWQ8 2551 aa1.48□□□□□ -2.17
SMC5-204ENST00000618375 NBEAL1Q6ZS30 2694 aa1.48□□□□□ -2.17
SMC5-204ENST00000618375 ZNF469Q96JG9 3925 aaPredicted RBP1.47□□□□□ -2.17
SMC5-204ENST00000618375 ZNF292O60281 2723 aa1.47□□□□□ -2.17
SMC5-204ENST00000618375 DMBT1Q9UGM3 2413 aaPredicted RBP1.47□□□□□ -2.17
SMC5-204ENST00000618375 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
SMC5-204ENST00000618375 PKD1L1Q8TDX9 2849 aa1.47□□□□□ -2.17
SMC5-204ENST00000618375 PKD1P98161 4303 aa1.47□□□□□ -2.17
SMC5-204ENST00000618375 APOBP04114 4563 aaKnown RBP1.46□□□□□ -2.18
SMC5-204ENST00000618375 BDP1A6H8Y1 2624 aa1.46□□□□□ -2.18
SMC5-204ENST00000618375 PKHD1P08F94 4074 aa1.46□□□□□ -2.18
SMC5-204ENST00000618375 USP9YO00507 2555 aaPredicted RBP1.46□□□□□ -2.18
SMC5-204ENST00000618375 KRTAP10-10P60014 251 aa1.46□□□□□ -2.18
SMC5-204ENST00000618375 CACNA1AO00555 2505 aa1.46□□□□□ -2.18
SMC5-204ENST00000618375 TNXBP22105 4242 aa1.46□□□□□ -2.18
SMC5-204ENST00000618375 VPS13BQ7Z7G8 4022 aa1.45□□□□□ -2.18
SMC5-204ENST00000618375 KRTAP10-1P60331 282 aa1.45□□□□□ -2.18
SMC5-204ENST00000618375 ABCA12Q86UK0 2595 aa1.45□□□□□ -2.18
SMC5-204ENST00000618375 TENM3Q9P273 2699 aa1.44□□□□□ -2.18
SMC5-204ENST00000618375 FASNP49327 2511 aaKnown RBP1.44□□□□□ -2.18
SMC5-204ENST00000618375 ITPR2Q14571 2701 aa1.44□□□□□ -2.18
SMC5-204ENST00000618375 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
SMC5-204ENST00000618375 DNAH5Q8TE73 4624 aa1.43□□□□□ -2.18
SMC5-204ENST00000618375 ACACBO00763 2458 aa1.43□□□□□ -2.18
SMC5-204ENST00000618375 PLECQ15149 4684 aaKnown RBP1.43□□□□□ -2.18
SMC5-204ENST00000618375 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
SMC5-204ENST00000618375 HSPG2P98160 4391 aa1.43□□□□□ -2.18
SMC5-204ENST00000618375 FAT3Q8TDW7 4589 aa1.41□□□□□ -2.18
SMC5-204ENST00000618375 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
SMC5-204ENST00000618375 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
SMC5-204ENST00000618375 TEP1Q99973 2627 aaKnown RBP1.4□□□□□ -2.18
SMC5-204ENST00000618375 FAT2Q9NYQ8 4349 aa1.4□□□□□ -2.19
SMC5-204ENST00000618375 DYNC1H1Q14204 4646 aaKnown RBP1.39□□□□□ -2.19
SMC5-204ENST00000618375 ATRQ13535 2644 aa1.39□□□□□ -2.19
SMC5-204ENST00000618375 MYO18BQ8IUG5 2567 aa1.39□□□□□ -2.19
SMC5-204ENST00000618375 MAST4O15021 2626 aa1.38□□□□□ -2.19
SMC5-204ENST00000618375 FLNAP21333 2647 aaKnown RBP1.38□□□□□ -2.19
SMC5-204ENST00000618375 NOTCH1P46531 2555 aa1.38□□□□□ -2.19
SMC5-204ENST00000618375 STARD9Q9P2P6 4700 aa1.37□□□□□ -2.19
SMC5-204ENST00000618375 KRTAP8-1Q8IUC2 63 aa1.37□□□□□ -2.19
SMC5-204ENST00000618375 USP24Q9UPU5 2620 aa1.37□□□□□ -2.19
SMC5-204ENST00000618375 POLQO75417 2590 aa1.37□□□□□ -2.19
SMC5-204ENST00000618375 LRP1BQ9NZR2 4599 aa1.34□□□□□ -2.19
SMC5-204ENST00000618375 NSD1Q96L73 2696 aaPredicted RBP1.33□□□□□ -2.2
SMC5-204ENST00000618375 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
SMC5-204ENST00000618375 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
SMC5-204ENST00000618375 MGAM2Q2M2H8 2515 aa1.32□□□□□ -2.2
SMC5-204ENST00000618375 FLNBO75369 2602 aaKnown RBP1.31□□□□□ -2.2
SMC5-204ENST00000618375 IGSF10Q6WRI0 2623 aa1.31□□□□□ -2.2
SMC5-204ENST00000618375 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
SMC5-204ENST00000618375 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
SMC5-204ENST00000618375 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
SMC5-204ENST00000618375 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
SMC5-204ENST00000618375 STAB1Q9NY15 2570 aa1.31□□□□□ -2.2
SMC5-204ENST00000618375 FAT1Q14517 4588 aa1.3□□□□□ -2.2
SMC5-204ENST00000618375 FLNCQ14315 2725 aa1.29□□□□□ -2.2
SMC5-204ENST00000618375 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
SMC5-204ENST00000618375 HERC1Q15751 4861 aa1.27□□□□□ -2.21
SMC5-204ENST00000618375 M0R2T5 61 aa1.26□□□□□ -2.21
SMC5-204ENST00000618375 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
SMC5-204ENST00000618375 SMR3BP02814 79 aaPredicted RBP1.24□□□□□ -2.21
SMC5-204ENST00000618375 LPAP08519 4548 aa1.22□□□□□ -2.21
SMC5-204ENST00000618375 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms