RNA–Protein interactions for RNA: ENST00000614895.4

PCDH15-227, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 9,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-227ENST00000614895 VPS13CQ709C8 3753 aa2.27□□□□□ -2.05
PCDH15-227ENST00000614895 DNAH11Q96DT5 4516 aa2.26□□□□□ -2.05
PCDH15-227ENST00000614895 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
PCDH15-227ENST00000614895 LCE2DQ5TA82 110 aaPredicted RBP2.26□□□□□ -2.05
PCDH15-227ENST00000614895 KRTAP10-4P60372 401 aaPredicted RBP2.26□□□□□ -2.05
PCDH15-227ENST00000614895 MUC3AQ02505 3323 aa2.26□□□□□ -2.05
PCDH15-227ENST00000614895 CSMD2Q7Z408 3487 aa2.25□□□□□ -2.05
PCDH15-227ENST00000614895 MT1HL1P0DM35 61 aa2.24□□□□□ -2.05
PCDH15-227ENST00000614895 KRTAP10-12P60413 245 aa2.24□□□□□ -2.05
PCDH15-227ENST00000614895 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
PCDH15-227ENST00000614895 FBN1P35555 2871 aaKnown RBP2.22□□□□□ -2.05
PCDH15-227ENST00000614895 VPS13DQ5THJ4 4388 aa2.2□□□□□ -2.06
PCDH15-227ENST00000614895 SACSQ9NZJ4 4579 aa2.2□□□□□ -2.06
PCDH15-227ENST00000614895 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
PCDH15-227ENST00000614895 PCLOQ9Y6V0 5065 aa2.19□□□□□ -2.06
PCDH15-227ENST00000614895 TRRAPQ9Y4A5 3859 aa2.18□□□□□ -2.06
PCDH15-227ENST00000614895 DNAH3Q8TD57 4116 aa2.17□□□□□ -2.06
PCDH15-227ENST00000614895 CMYA5Q8N3K9 4069 aa2.17□□□□□ -2.06
PCDH15-227ENST00000614895 RYR2Q92736 4967 aa2.17□□□□□ -2.06
PCDH15-227ENST00000614895 KRTAP10-7P60409 375 aaPredicted RBP2.15□□□□□ -2.07
PCDH15-227ENST00000614895 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
PCDH15-227ENST00000614895 CSMD3Q7Z407 3707 aa2.13□□□□□ -2.07
PCDH15-227ENST00000614895 LRP1BQ9NZR2 4599 aa2.12□□□□□ -2.07
PCDH15-227ENST00000614895 DNAH5Q8TE73 4624 aa2.12□□□□□ -2.07
PCDH15-227ENST00000614895 BIRC6Q9NR09 4857 aa2.12□□□□□ -2.07
PCDH15-227ENST00000614895 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
PCDH15-227ENST00000614895 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
PCDH15-227ENST00000614895 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
PCDH15-227ENST00000614895 DYNC2H1Q8NCM8 4307 aaKnown RBP2.11□□□□□ -2.07
PCDH15-227ENST00000614895 FRAS1Q86XX4 4008 aa2.1□□□□□ -2.07
PCDH15-227ENST00000614895 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
PCDH15-227ENST00000614895 APOBP04114 4563 aaKnown RBP2.09□□□□□ -2.07
PCDH15-227ENST00000614895 ZNF469Q96JG9 3925 aaPredicted RBP2.08□□□□□ -2.08
PCDH15-227ENST00000614895 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
PCDH15-227ENST00000614895 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
PCDH15-227ENST00000614895 ANK2Q01484 3957 aa2.06□□□□□ -2.08
PCDH15-227ENST00000614895 FAT1Q14517 4588 aa2.06□□□□□ -2.08
PCDH15-227ENST00000614895 DNAH7Q8WXX0 4024 aa2.05□□□□□ -2.08
PCDH15-227ENST00000614895 LCE2AQ5TA79 106 aaPredicted RBP2.05□□□□□ -2.08
PCDH15-227ENST00000614895 LCE2CQ5TA81 110 aa2.04□□□□□ -2.08
PCDH15-227ENST00000614895 KRTAP4-5Q9BYR2 181 aa2.04□□□□□ -2.08
PCDH15-227ENST00000614895 FAT3Q8TDW7 4589 aa2.04□□□□□ -2.08
PCDH15-227ENST00000614895 DNAH6Q9C0G6 4158 aa2.03□□□□□ -2.08
PCDH15-227ENST00000614895 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
PCDH15-227ENST00000614895 FAT2Q9NYQ8 4349 aa2.03□□□□□ -2.08
PCDH15-227ENST00000614895 LCE2BO14633 110 aa2.03□□□□□ -2.08
PCDH15-227ENST00000614895 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
PCDH15-227ENST00000614895 STARD9Q9P2P6 4700 aa2.02□□□□□ -2.09
PCDH15-227ENST00000614895 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
PCDH15-227ENST00000614895 PRKDCP78527 4128 aaKnown RBP2□□□□□ -2.09
PCDH15-227ENST00000614895 FLGP20930 4061 aaPredicted RBP2□□□□□ -2.09
PCDH15-227ENST00000614895 LYSTQ99698 3801 aa1.99□□□□□ -2.09
PCDH15-227ENST00000614895 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
PCDH15-227ENST00000614895 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
PCDH15-227ENST00000614895 KMT2AQ03164 3969 aa1.97□□□□□ -2.09
PCDH15-227ENST00000614895 DNHD1Q96M86 4753 aa1.96□□□□□ -2.1
PCDH15-227ENST00000614895 MT2AP02795 61 aa1.95□□□□□ -2.1
PCDH15-227ENST00000614895 ABCA13Q86UQ4 5058 aa1.95□□□□□ -2.1
PCDH15-227ENST00000614895 MT1HP80294 61 aa1.94□□□□□ -2.1
PCDH15-227ENST00000614895 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
PCDH15-227ENST00000614895 KIAA1109Q2LD37 5005 aa1.94□□□□□ -2.1
PCDH15-227ENST00000614895 RYR3Q15413 4870 aa1.94□□□□□ -2.1
PCDH15-227ENST00000614895 HERC2O95714 4834 aa1.93□□□□□ -2.1
PCDH15-227ENST00000614895 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
PCDH15-227ENST00000614895 MT1FP04733 61 aa1.92□□□□□ -2.1
PCDH15-227ENST00000614895 KRTAP9-6A0A140TA67 174 aa1.92□□□□□ -2.1
PCDH15-227ENST00000614895 HECTD4Q9Y4D8 3996 aa1.91□□□□□ -2.1
PCDH15-227ENST00000614895 PKD1P98161 4303 aa1.9□□□□□ -2.1
PCDH15-227ENST00000614895 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.11
PCDH15-227ENST00000614895 KRTAP19-1Q8IUB9 90 aa1.9□□□□□ -2.11
PCDH15-227ENST00000614895 HERC1Q15751 4861 aa1.9□□□□□ -2.11
PCDH15-227ENST00000614895 MYCBP2O75592 4640 aa1.89□□□□□ -2.11
PCDH15-227ENST00000614895 SPRR2EP22531 72 aa1.88□□□□□ -2.11
PCDH15-227ENST00000614895 SPRR2BP35325 72 aa1.88□□□□□ -2.11
PCDH15-227ENST00000614895 SPRR2AP35326 72 aa1.88□□□□□ -2.11
PCDH15-227ENST00000614895 HSPG2P98160 4391 aa1.88□□□□□ -2.11
PCDH15-227ENST00000614895 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
PCDH15-227ENST00000614895 UBR4Q5T4S7 5183 aa1.87□□□□□ -2.11
PCDH15-227ENST00000614895 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
PCDH15-227ENST00000614895 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
PCDH15-227ENST00000614895 SPRR2DP22532 72 aa1.86□□□□□ -2.11
PCDH15-227ENST00000614895 MT1XP80297 61 aa1.86□□□□□ -2.11
PCDH15-227ENST00000614895 KRTAP9-2Q9BYQ4 174 aa1.85□□□□□ -2.11
PCDH15-227ENST00000614895 EPPK1P58107 5090 aaKnown RBP1.84□□□□□ -2.12
PCDH15-227ENST00000614895 HMCN2Q8NDA2 5059 aa1.83□□□□□ -2.12
PCDH15-227ENST00000614895 MT1BP07438 61 aa1.82□□□□□ -2.12
PCDH15-227ENST00000614895 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
PCDH15-227ENST00000614895 LPAP08519 4548 aa1.79□□□□□ -2.12
PCDH15-227ENST00000614895 TNXBP22105 4242 aa1.79□□□□□ -2.12
PCDH15-227ENST00000614895 PKHD1P08F94 4074 aa1.79□□□□□ -2.12
PCDH15-227ENST00000614895 LCE3BQ5TA77 95 aa1.78□□□□□ -2.12
PCDH15-227ENST00000614895 MT1GP13640 62 aa1.77□□□□□ -2.13
PCDH15-227ENST00000614895 LRP2P98164 4655 aa1.76□□□□□ -2.13
PCDH15-227ENST00000614895 KRTAP9-8Q9BYQ0 159 aa1.76□□□□□ -2.13
PCDH15-227ENST00000614895 KRTAP4-8A0A0G2JLE6 195 aa1.76□□□□□ -2.13
PCDH15-227ENST00000614895 KRTAP4-8Q9BYQ9 185 aa1.76□□□□□ -2.13
PCDH15-227ENST00000614895 USH2AO75445 5202 aa1.75□□□□□ -2.13
PCDH15-227ENST00000614895 KRTAP9-7A8MTY7 169 aa1.75□□□□□ -2.13
PCDH15-227ENST00000614895 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
PCDH15-227ENST00000614895 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms