RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 DNAH3Q8TD57 4116 aa0.61□□□□□ -2.31
SCAMP1-205ENST00000614488 FSIP2Q5CZC0 6907 aa0.61□□□□□ -2.31
SCAMP1-205ENST00000614488 DNAH7Q8WXX0 4024 aa0.61□□□□□ -2.31
SCAMP1-205ENST00000614488 WFDC13Q8IUB5 93 aa0.6□□□□□ -2.31
SCAMP1-205ENST00000614488 CDKN2A-AS1Q9UH64 79 aa0.6□□□□□ -2.31
SCAMP1-205ENST00000614488 HECTD4Q9Y4D8 3996 aa0.6□□□□□ -2.31
SCAMP1-205ENST00000614488 HSPG2P98160 4391 aa0.59□□□□□ -2.31
SCAMP1-205ENST00000614488 DEFB131BA0A096LNP1 70 aa0.59□□□□□ -2.31
SCAMP1-205ENST00000614488 M0R1W7 72 aa0.59□□□□□ -2.31
SCAMP1-205ENST00000614488 MRPL33O75394 65 aaKnown RBP0.59□□□□□ -2.31
SCAMP1-205ENST00000614488 LINC00158P58513 81 aa0.59□□□□□ -2.31
SCAMP1-205ENST00000614488 DEFB133Q30KQ1 61 aa0.59□□□□□ -2.31
SCAMP1-205ENST00000614488 COX6B2Q6YFQ2 88 aa0.59□□□□□ -2.31
SCAMP1-205ENST00000614488 PKHD1P08F94 4074 aa0.59□□□□□ -2.32
SCAMP1-205ENST00000614488 DYNC1H1Q14204 4646 aaKnown RBP0.58□□□□□ -2.32
SCAMP1-205ENST00000614488 STARD9Q9P2P6 4700 aa0.58□□□□□ -2.32
SCAMP1-205ENST00000614488 FAT2Q9NYQ8 4349 aa0.58□□□□□ -2.32
SCAMP1-205ENST00000614488 DEFB108AA8MXU0 73 aa0.58□□□□□ -2.32
SCAMP1-205ENST00000614488 KMT2AQ03164 3969 aa0.58□□□□□ -2.32
SCAMP1-205ENST00000614488 VPS13DQ5THJ4 4388 aa0.58□□□□□ -2.32
SCAMP1-205ENST00000614488 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 H0YAA0 97 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 STATHP02808 62 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 DEFB114Q30KQ6 69 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 NCBP2-AS2Q69YL0 99 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 STAB2Q8WWQ8 2551 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 DNAH17Q9UFH2 4485 aa0.57□□□□□ -2.32
SCAMP1-205ENST00000614488 ALMS1Q8TCU4 4167 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 PLECQ15149 4684 aaKnown RBP0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 DNAH11Q96DT5 4516 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 DMBT1Q9UGM3 2413 aaPredicted RBP0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 SSPOA2VEC9 5147 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 DNAH2Q9P225 4427 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 WNK2Q9Y3S1 2297 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 SPINK4O60575 86 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 SPINK6Q6UWN8 80 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 NMES1Q9C002 83 aa0.56□□□□□ -2.32
SCAMP1-205ENST00000614488 PKD1P98161 4303 aa0.55□□□□□ -2.32
SCAMP1-205ENST00000614488 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
SCAMP1-205ENST00000614488 COX14Q96I36 57 aa0.55□□□□□ -2.32
SCAMP1-205ENST00000614488 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
SCAMP1-205ENST00000614488 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
SCAMP1-205ENST00000614488 NEBP20929 6669 aa0.55□□□□□ -2.32
SCAMP1-205ENST00000614488 SYNE2Q8WXH0 6885 aaKnown RBP0.54□□□□□ -2.32
SCAMP1-205ENST00000614488 APOBP04114 4563 aaKnown RBP0.54□□□□□ -2.32
SCAMP1-205ENST00000614488 MYCBP2O75592 4640 aa0.54□□□□□ -2.32
SCAMP1-205ENST00000614488 SRRM2Q9UQ35 2752 aaKnown RBP0.54□□□□□ -2.32
SCAMP1-205ENST00000614488 MACF1Q9UPN3 7388 aaKnown RBP0.53□□□□□ -2.32
SCAMP1-205ENST00000614488 VPS13BQ7Z7G8 4022 aa0.53□□□□□ -2.32
SCAMP1-205ENST00000614488 IGIPA6NJ69 53 aa0.53□□□□□ -2.32
SCAMP1-205ENST00000614488 PRH1P02810 166 aa0.53□□□□□ -2.32
SCAMP1-205ENST00000614488 SERF2P84101 59 aa0.53□□□□□ -2.32
SCAMP1-205ENST00000614488 TNXBP22105 4242 aa0.53□□□□□ -2.32
SCAMP1-205ENST00000614488 PKHD1L1Q86WI1 4243 aa0.53□□□□□ -2.32
SCAMP1-205ENST00000614488 USH2AO75445 5202 aa0.53□□□□□ -2.33
SCAMP1-205ENST00000614488 LRP1BQ9NZR2 4599 aa0.53□□□□□ -2.33
SCAMP1-205ENST00000614488 FAT1Q14517 4588 aa0.52□□□□□ -2.33
SCAMP1-205ENST00000614488 DNAH5Q8TE73 4624 aa0.52□□□□□ -2.33
SCAMP1-205ENST00000614488 LRP2P98164 4655 aa0.52□□□□□ -2.33
SCAMP1-205ENST00000614488 FAT3Q8TDW7 4589 aa0.52□□□□□ -2.33
SCAMP1-205ENST00000614488 SNRPGP15A8MWD9 76 aa0.52□□□□□ -2.33
SCAMP1-205ENST00000614488 DEFB130BP0DP73 79 aa0.52□□□□□ -2.33
SCAMP1-205ENST00000614488 DEFB130AP0DP74 79 aa0.52□□□□□ -2.33
SCAMP1-205ENST00000614488 LYNX1G3V0Z9 82 aa0.51□□□□□ -2.33
SCAMP1-205ENST00000614488 SPINK1P00995 79 aa0.51□□□□□ -2.33
SCAMP1-205ENST00000614488 IAPPP10997 89 aa0.51□□□□□ -2.33
SCAMP1-205ENST00000614488 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
SCAMP1-205ENST00000614488 MINOS1Q5TGZ0 78 aa0.51□□□□□ -2.33
SCAMP1-205ENST00000614488 TOMM5Q8N4H5 51 aa0.51□□□□□ -2.33
SCAMP1-205ENST00000614488 ABRACLQ9P1F3 81 aa0.51□□□□□ -2.33
SCAMP1-205ENST00000614488 SNRPGP62308 76 aaKnown RBP0.5□□□□□ -2.33
SCAMP1-205ENST00000614488 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
SCAMP1-205ENST00000614488 DEFB108BQ8NET1 73 aa0.5□□□□□ -2.33
SCAMP1-205ENST00000614488 DEFB104AQ8WTQ1 72 aa0.5□□□□□ -2.33
SCAMP1-205ENST00000614488 LRP1Q07954 4544 aaKnown RBP0.49□□□□□ -2.33
SCAMP1-205ENST00000614488 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
SCAMP1-205ENST00000614488 H0YGG7 62 aa0.48□□□□□ -2.33
SCAMP1-205ENST00000614488 MT1HL1P0DM35 61 aa0.48□□□□□ -2.33
SCAMP1-205ENST00000614488 PLNP26678 52 aa0.48□□□□□ -2.33
SCAMP1-205ENST00000614488 KRTAP20-1Q3LI63 56 aa0.48□□□□□ -2.33
SCAMP1-205ENST00000614488 C6orf48Q9UBA6 75 aa0.48□□□□□ -2.33
SCAMP1-205ENST00000614488 MUC12Q9UKN1 5478 aa0.48□□□□□ -2.33
SCAMP1-205ENST00000614488 DEFB106AQ8N104 65 aa0.47□□□□□ -2.33
SCAMP1-205ENST00000614488 CMC2Q9NRP2 79 aa0.47□□□□□ -2.33
SCAMP1-205ENST00000614488 TIMM8BQ9Y5J9 83 aaPredicted RBP0.47□□□□□ -2.33
SCAMP1-205ENST00000614488 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
SCAMP1-205ENST00000614488 DNAH8Q96JB1 4490 aa0.47□□□□□ -2.33
SCAMP1-205ENST00000614488 H0YGX0 51 aa0.46□□□□□ -2.34
SCAMP1-205ENST00000614488 RPS27P42677 84 aaKnown RBP0.46□□□□□ -2.34
SCAMP1-205ENST00000614488 DEFB110Q30KQ9 67 aa0.46□□□□□ -2.34
SCAMP1-205ENST00000614488 RPS27LQ71UM5 84 aaKnown RBP0.46□□□□□ -2.34
SCAMP1-205ENST00000614488 LINC00308Q8TCZ7 52 aa0.46□□□□□ -2.34
SCAMP1-205ENST00000614488 TMEM167BQ9NRX6 74 aa0.46□□□□□ -2.34
SCAMP1-205ENST00000614488 SMIM27A0A1W2PRY6 76 aa0.45□□□□□ -2.34
SCAMP1-205ENST00000614488 KMT2DO14686 5537 aa0.45□□□□□ -2.34
SCAMP1-205ENST00000614488 KAAG1Q9UBP8 84 aa0.45□□□□□ -2.34
SCAMP1-205ENST00000614488 LPAP08519 4548 aa0.45□□□□□ -2.34
SCAMP1-205ENST00000614488 KRTAP19-6Q3LI70 58 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms