RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 CYSTM1Q9H1C7 97 aa4.4□□□□□ -1.71
PSMB3-208ENST00000613870 H7BZZ5 65 aa4.39□□□□□ -1.71
PSMB3-208ENST00000613870 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
PSMB3-208ENST00000613870 C4orf26Q17RF5 130 aa4.38□□□□□ -1.71
PSMB3-208ENST00000613870 H3BS24 57 aa4.36□□□□□ -1.71
PSMB3-208ENST00000613870 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
PSMB3-208ENST00000613870 HRES1P13985 223 aa4.35□□□□□ -1.71
PSMB3-208ENST00000613870 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
PSMB3-208ENST00000613870 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
PSMB3-208ENST00000613870 COX6B2Q6YFQ2 88 aa4.29□□□□□ -1.72
PSMB3-208ENST00000613870 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
PSMB3-208ENST00000613870 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
PSMB3-208ENST00000613870 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
PSMB3-208ENST00000613870 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
PSMB3-208ENST00000613870 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
PSMB3-208ENST00000613870 A8MUN3 132 aa4.25□□□□□ -1.73
PSMB3-208ENST00000613870 ACYP2P14621 99 aa4.25□□□□□ -1.73
PSMB3-208ENST00000613870 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
PSMB3-208ENST00000613870 DMAC1Q96GE9 116 aa4.24□□□□□ -1.73
PSMB3-208ENST00000613870 MT1HP80294 61 aa4.23□□□□□ -1.73
PSMB3-208ENST00000613870 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
PSMB3-208ENST00000613870 Q1T7F1 81 aa4.23□□□□□ -1.73
PSMB3-208ENST00000613870 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
PSMB3-208ENST00000613870 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
PSMB3-208ENST00000613870 MPLKIPQ8TAP9 179 aa4.21□□□□□ -1.74
PSMB3-208ENST00000613870 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
PSMB3-208ENST00000613870 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
PSMB3-208ENST00000613870 COA5Q86WW8 74 aa4.2□□□□□ -1.74
PSMB3-208ENST00000613870 S4R3F8 94 aa4.19□□□□□ -1.74
PSMB3-208ENST00000613870 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
PSMB3-208ENST00000613870 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
PSMB3-208ENST00000613870 SPTSSBQ8NFR3 76 aa4.16□□□□□ -1.74
PSMB3-208ENST00000613870 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.75
PSMB3-208ENST00000613870 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
PSMB3-208ENST00000613870 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
PSMB3-208ENST00000613870 M0R2T5 61 aa4.13□□□□□ -1.75
PSMB3-208ENST00000613870 LCA10Q71F78 164 aa4.13□□□□□ -1.75
PSMB3-208ENST00000613870 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
PSMB3-208ENST00000613870 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
PSMB3-208ENST00000613870 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
PSMB3-208ENST00000613870 PSPHP1O15172 72 aa4.03□□□□□ -1.76
PSMB3-208ENST00000613870 Q5VV11 94 aa4.03□□□□□ -1.76
PSMB3-208ENST00000613870 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
PSMB3-208ENST00000613870 USH2AO75445 5202 aa4.03□□□□□ -1.76
PSMB3-208ENST00000613870 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
PSMB3-208ENST00000613870 A0A1B0GU69 56 aa4□□□□□ -1.77
PSMB3-208ENST00000613870 ADM2Q7Z4H4 148 aa4□□□□□ -1.77
PSMB3-208ENST00000613870 PRR15LQ9BU68 103 aa4□□□□□ -1.77
PSMB3-208ENST00000613870 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
PSMB3-208ENST00000613870 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
PSMB3-208ENST00000613870 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
PSMB3-208ENST00000613870 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
PSMB3-208ENST00000613870 A6NED7 52 aa3.95□□□□□ -1.78
PSMB3-208ENST00000613870 A6NN06 94 aa3.95□□□□□ -1.78
PSMB3-208ENST00000613870 MT2AP02795 61 aa3.95□□□□□ -1.78
PSMB3-208ENST00000613870 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
PSMB3-208ENST00000613870 H0YAA0 97 aa3.93□□□□□ -1.78
PSMB3-208ENST00000613870 P0C880 135 aa3.92□□□□□ -1.78
PSMB3-208ENST00000613870 MT1FP04733 61 aa3.91□□□□□ -1.78
PSMB3-208ENST00000613870 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
PSMB3-208ENST00000613870 A0A1B0GU33 70 aa3.9□□□□□ -1.79
PSMB3-208ENST00000613870 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
PSMB3-208ENST00000613870 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
PSMB3-208ENST00000613870 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
PSMB3-208ENST00000613870 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
PSMB3-208ENST00000613870 R4GN34 69 aa3.87□□□□□ -1.79
PSMB3-208ENST00000613870 M0QZ58 72 aa3.86□□□□□ -1.79
PSMB3-208ENST00000613870 A8MU10 97 aa3.84□□□□□ -1.79
PSMB3-208ENST00000613870 UQCR11O14957 56 aa3.84□□□□□ -1.79
PSMB3-208ENST00000613870 CRIPTQ9P021 101 aa3.84□□□□□ -1.79
PSMB3-208ENST00000613870 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
PSMB3-208ENST00000613870 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
PSMB3-208ENST00000613870 A0A0D9SG42 100 aa3.81□□□□□ -1.8
PSMB3-208ENST00000613870 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
PSMB3-208ENST00000613870 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
PSMB3-208ENST00000613870 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
PSMB3-208ENST00000613870 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
PSMB3-208ENST00000613870 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
PSMB3-208ENST00000613870 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
PSMB3-208ENST00000613870 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
PSMB3-208ENST00000613870 K7ERS5 55 aa3.71□□□□□ -1.82
PSMB3-208ENST00000613870 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
PSMB3-208ENST00000613870 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
PSMB3-208ENST00000613870 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
PSMB3-208ENST00000613870 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
PSMB3-208ENST00000613870 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.83
PSMB3-208ENST00000613870 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
PSMB3-208ENST00000613870 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
PSMB3-208ENST00000613870 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
PSMB3-208ENST00000613870 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
PSMB3-208ENST00000613870 MT1BP07438 61 aa3.59□□□□□ -1.83
PSMB3-208ENST00000613870 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
PSMB3-208ENST00000613870 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
PSMB3-208ENST00000613870 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
PSMB3-208ENST00000613870 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
PSMB3-208ENST00000613870 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
PSMB3-208ENST00000613870 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
PSMB3-208ENST00000613870 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
PSMB3-208ENST00000613870 ROMO1P60602 79 aa3.48□□□□□ -1.85
PSMB3-208ENST00000613870 KMT2DO14686 5537 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms