RNA–Protein interactions for RNA: ENST00000613509.1

ZNF48-205, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF48, Length 3,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-205ENST00000613509 TPRXLQ17RH7 258 aa9.15□□□□□ -0.94
ZNF48-205ENST00000613509 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
ZNF48-205ENST00000613509 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
ZNF48-205ENST00000613509 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
ZNF48-205ENST00000613509 DYNC1H1Q14204 4646 aaKnown RBP9.01□□□□□ -0.97
ZNF48-205ENST00000613509 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
ZNF48-205ENST00000613509 KRTAP10-8P60410 259 aa9□□□□□ -0.97
ZNF48-205ENST00000613509 S4R3F8 94 aa8.98□□□□□ -0.97
ZNF48-205ENST00000613509 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
ZNF48-205ENST00000613509 MYCBP2O75592 4640 aa8.92□□□□□ -0.98
ZNF48-205ENST00000613509 KRTAP10-4P60372 401 aaPredicted RBP8.91□□□□□ -0.98
ZNF48-205ENST00000613509 PKHD1L1Q86WI1 4243 aa8.9□□□□□ -0.99
ZNF48-205ENST00000613509 HSPG2P98160 4391 aa8.87□□□□□ -0.99
ZNF48-205ENST00000613509 LRP1Q07954 4544 aaKnown RBP8.87□□□□□ -0.99
ZNF48-205ENST00000613509 RYR2Q92736 4967 aa8.85□□□□□ -0.99
ZNF48-205ENST00000613509 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
ZNF48-205ENST00000613509 RYR3Q15413 4870 aa8.84□□□□□ -0.99
ZNF48-205ENST00000613509 A0A0A0MQY5 61 aa8.8□□□□□ -1
ZNF48-205ENST00000613509 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
ZNF48-205ENST00000613509 XP32Q5T750 250 aa8.78□□□□□ -1
ZNF48-205ENST00000613509 A0A1B0GVY2 172 aa8.77□□□□□ -1
ZNF48-205ENST00000613509 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
ZNF48-205ENST00000613509 FAT3Q8TDW7 4589 aa8.76□□□□□ -1.01
ZNF48-205ENST00000613509 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
ZNF48-205ENST00000613509 Q5VSD8 79 aa8.64□□□□□ -1.03
ZNF48-205ENST00000613509 LPAP08519 4548 aa8.61□□□□□ -1.03
ZNF48-205ENST00000613509 EPPK1P58107 5090 aaKnown RBP8.61□□□□□ -1.03
ZNF48-205ENST00000613509 TNXBP22105 4242 aa8.58□□□□□ -1.04
ZNF48-205ENST00000613509 M0QZ58 72 aa8.54□□□□□ -1.04
ZNF48-205ENST00000613509 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
ZNF48-205ENST00000613509 LUZP6Q538Z0 58 aa8.5□□□□□ -1.05
ZNF48-205ENST00000613509 LRP2P98164 4655 aa8.47□□□□□ -1.05
ZNF48-205ENST00000613509 R4GN34 69 aa8.44□□□□□ -1.06
ZNF48-205ENST00000613509 RYR1P21817 5038 aa8.42□□□□□ -1.06
ZNF48-205ENST00000613509 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
ZNF48-205ENST00000613509 PLAC4Q8WY50 150 aa8.34□□□□□ -1.07
ZNF48-205ENST00000613509 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
ZNF48-205ENST00000613509 MT1HL1P0DM35 61 aa8.28□□□□□ -1.08
ZNF48-205ENST00000613509 J3QL48 77 aa8.18□□□□□ -1.1
ZNF48-205ENST00000613509 ABCA13Q86UQ4 5058 aa8.16□□□□□ -1.1
ZNF48-205ENST00000613509 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
ZNF48-205ENST00000613509 HERC2O95714 4834 aa8.08□□□□□ -1.12
ZNF48-205ENST00000613509 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
ZNF48-205ENST00000613509 PCLOQ9Y6V0 5065 aa7.9□□□□□ -1.14
ZNF48-205ENST00000613509 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.14
ZNF48-205ENST00000613509 HERC1Q15751 4861 aa7.88□□□□□ -1.15
ZNF48-205ENST00000613509 BIRC6Q9NR09 4857 aa7.88□□□□□ -1.15
ZNF48-205ENST00000613509 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
ZNF48-205ENST00000613509 MUC17Q685J3 4493 aa7.85□□□□□ -1.15
ZNF48-205ENST00000613509 MUC2Q02817 5179 aa7.85□□□□□ -1.15
ZNF48-205ENST00000613509 TNP1P09430 55 aa7.72□□□□□ -1.17
ZNF48-205ENST00000613509 KRTAP19-2Q3LHN2 52 aa7.64□□□□□ -1.19
ZNF48-205ENST00000613509 RNF213Q63HN8 5207 aa7.62□□□□□ -1.19
ZNF48-205ENST00000613509 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
ZNF48-205ENST00000613509 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
ZNF48-205ENST00000613509 SPRR5A0A1B0GTR4 108 aa7.44□□□□□ -1.22
ZNF48-205ENST00000613509 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
ZNF48-205ENST00000613509 HMCN2Q8NDA2 5059 aa7.4□□□□□ -1.23
ZNF48-205ENST00000613509 LCE3AQ5TA76 89 aa7.34□□□□□ -1.23
ZNF48-205ENST00000613509 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
ZNF48-205ENST00000613509 M0R2T5 61 aa7.28□□□□□ -1.24
ZNF48-205ENST00000613509 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
ZNF48-205ENST00000613509 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
ZNF48-205ENST00000613509 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
ZNF48-205ENST00000613509 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
ZNF48-205ENST00000613509 LCE2CQ5TA81 110 aa7.09□□□□□ -1.28
ZNF48-205ENST00000613509 MT1FP04733 61 aa6.99□□□□□ -1.29
ZNF48-205ENST00000613509 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
ZNF48-205ENST00000613509 MT2AP02795 61 aa6.93□□□□□ -1.3
ZNF48-205ENST00000613509 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
ZNF48-205ENST00000613509 MT1HP80294 61 aa6.92□□□□□ -1.3
ZNF48-205ENST00000613509 INE1O15225 51 aa6.87□□□□□ -1.31
ZNF48-205ENST00000613509 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
ZNF48-205ENST00000613509 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
ZNF48-205ENST00000613509 MT1XP80297 61 aa6.82□□□□□ -1.32
ZNF48-205ENST00000613509 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
ZNF48-205ENST00000613509 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
ZNF48-205ENST00000613509 MT1BP07438 61 aa6.77□□□□□ -1.33
ZNF48-205ENST00000613509 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
ZNF48-205ENST00000613509 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
ZNF48-205ENST00000613509 USH2AO75445 5202 aa6.64□□□□□ -1.35
ZNF48-205ENST00000613509 KMT2DO14686 5537 aa6.58□□□□□ -1.36
ZNF48-205ENST00000613509 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
ZNF48-205ENST00000613509 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
ZNF48-205ENST00000613509 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
ZNF48-205ENST00000613509 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
ZNF48-205ENST00000613509 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
ZNF48-205ENST00000613509 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
ZNF48-205ENST00000613509 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
ZNF48-205ENST00000613509 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
ZNF48-205ENST00000613509 LCE2BO14633 110 aa6.24□□□□□ -1.41
ZNF48-205ENST00000613509 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.44
ZNF48-205ENST00000613509 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.44
ZNF48-205ENST00000613509 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.44
ZNF48-205ENST00000613509 KRTAP19-7Q3SYF9 63 aa6.06□□□□□ -1.44
ZNF48-205ENST00000613509 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
ZNF48-205ENST00000613509 MT1LQ93083 61 aa5.92□□□□□ -1.46
ZNF48-205ENST00000613509 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
ZNF48-205ENST00000613509 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
ZNF48-205ENST00000613509 MT1EP04732 61 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms