RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 LCA10Q71F78 164 aa9.95□□□□□ -0.82
CPNE9-205ENST00000613455 CHKB-CPT1BH3BT56 60 aa9.94□□□□□ -0.82
CPNE9-205ENST00000613455 FAT4Q6V0I7 4981 aa9.93□□□□□ -0.82
CPNE9-205ENST00000613455 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
CPNE9-205ENST00000613455 RPS28P62857 69 aaKnown RBP9.87□□□□□ -0.83
CPNE9-205ENST00000613455 MT1HP80294 61 aa9.8□□□□□ -0.84
CPNE9-205ENST00000613455 SPTSSBQ8NFR3 76 aa9.77□□□□□ -0.85
CPNE9-205ENST00000613455 CSAG1Q6PB30 78 aa9.74□□□□□ -0.85
CPNE9-205ENST00000613455 SMIM26A0A096LP01 95 aa9.69□□□□□ -0.86
CPNE9-205ENST00000613455 M0R2T5 61 aa9.64□□□□□ -0.87
CPNE9-205ENST00000613455 LINC01558Q9Y6Z2 57 aa9.59□□□□□ -0.87
CPNE9-205ENST00000613455 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
CPNE9-205ENST00000613455 Q1T7F1 81 aa9.57□□□□□ -0.88
CPNE9-205ENST00000613455 H0YAA0 97 aa9.53□□□□□ -0.88
CPNE9-205ENST00000613455 V9GYY9 64 aa9.52□□□□□ -0.89
CPNE9-205ENST00000613455 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
CPNE9-205ENST00000613455 ADM2Q7Z4H4 148 aa9.5□□□□□ -0.89
CPNE9-205ENST00000613455 A0A1B0GU69 56 aa9.48□□□□□ -0.89
CPNE9-205ENST00000613455 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
CPNE9-205ENST00000613455 SEC61GP60059 68 aa9.45□□□□□ -0.9
CPNE9-205ENST00000613455 P0C880 135 aa9.45□□□□□ -0.9
CPNE9-205ENST00000613455 PRR15LQ9BU68 103 aa9.45□□□□□ -0.9
CPNE9-205ENST00000613455 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
CPNE9-205ENST00000613455 PSPHP1O15172 72 aa9.42□□□□□ -0.9
CPNE9-205ENST00000613455 KRTAP9-8Q9BYQ0 159 aa9.42□□□□□ -0.9
CPNE9-205ENST00000613455 MT2AP02795 61 aa9.36□□□□□ -0.91
CPNE9-205ENST00000613455 Q5VV11 94 aa9.36□□□□□ -0.91
CPNE9-205ENST00000613455 MT1FP04733 61 aa9.32□□□□□ -0.92
CPNE9-205ENST00000613455 A0A1B0GU33 70 aa9.27□□□□□ -0.93
CPNE9-205ENST00000613455 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
CPNE9-205ENST00000613455 KRTAP13-4Q3LI77 160 aa9.2□□□□□ -0.94
CPNE9-205ENST00000613455 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
CPNE9-205ENST00000613455 UQCR11O14957 56 aa9.16□□□□□ -0.94
CPNE9-205ENST00000613455 R4GN34 69 aa9.16□□□□□ -0.94
CPNE9-205ENST00000613455 M0QZ58 72 aa9.14□□□□□ -0.95
CPNE9-205ENST00000613455 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
CPNE9-205ENST00000613455 A6NED7 52 aa9.11□□□□□ -0.95
CPNE9-205ENST00000613455 KRTAP9-3Q9BYQ3 159 aa9.09□□□□□ -0.95
CPNE9-205ENST00000613455 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
CPNE9-205ENST00000613455 SPRR2GQ9BYE4 73 aa9.08□□□□□ -0.96
CPNE9-205ENST00000613455 MIR22HGQ0VDD5 57 aa9.04□□□□□ -0.96
CPNE9-205ENST00000613455 A8MU10 97 aa9□□□□□ -0.97
CPNE9-205ENST00000613455 LINC01554Q52M75 96 aa8.98□□□□□ -0.97
CPNE9-205ENST00000613455 A0A0D9SG42 100 aa8.97□□□□□ -0.97
CPNE9-205ENST00000613455 CDC42SE1Q9NRR8 79 aa8.94□□□□□ -0.98
CPNE9-205ENST00000613455 LCE2BO14633 110 aa8.88□□□□□ -0.99
CPNE9-205ENST00000613455 KRTAP19-8Q3LI54 63 aa8.87□□□□□ -0.99
CPNE9-205ENST00000613455 BRK1Q8WUW1 75 aa8.86□□□□□ -0.99
CPNE9-205ENST00000613455 A6NN06 94 aa8.83□□□□□ -1
CPNE9-205ENST00000613455 KRTAP12-1P59990 96 aa8.82□□□□□ -1
CPNE9-205ENST00000613455 KRTAP12-2P59991 146 aa8.79□□□□□ -1
CPNE9-205ENST00000613455 MT1BP07438 61 aa8.78□□□□□ -1
CPNE9-205ENST00000613455 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
CPNE9-205ENST00000613455 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
CPNE9-205ENST00000613455 USH2AO75445 5202 aa8.73□□□□□ -1.01
CPNE9-205ENST00000613455 PLAC4Q8WY50 150 aa8.67□□□□□ -1.02
CPNE9-205ENST00000613455 K7ERS5 55 aa8.63□□□□□ -1.03
CPNE9-205ENST00000613455 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
CPNE9-205ENST00000613455 PRO0628Q9UI54 55 aa8.55□□□□□ -1.04
CPNE9-205ENST00000613455 CAMK2N1Q7Z7J9 78 aa8.54□□□□□ -1.04
CPNE9-205ENST00000613455 FSIP2Q5CZC0 6907 aa8.48□□□□□ -1.05
CPNE9-205ENST00000613455 SSPOA2VEC9 5147 aa8.47□□□□□ -1.05
CPNE9-205ENST00000613455 MT1XP80297 61 aa8.46□□□□□ -1.06
CPNE9-205ENST00000613455 KRTAP10-5P60370 271 aa8.43□□□□□ -1.06
CPNE9-205ENST00000613455 PMAIP1Q13794 54 aa8.36□□□□□ -1.07
CPNE9-205ENST00000613455 KRTAP19-6Q3LI70 58 aa8.36□□□□□ -1.07
CPNE9-205ENST00000613455 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
CPNE9-205ENST00000613455 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
CPNE9-205ENST00000613455 ROMO1P60602 79 aa8.28□□□□□ -1.08
CPNE9-205ENST00000613455 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
CPNE9-205ENST00000613455 FCGBPQ9Y6R7 5405 aaPredicted RBP8.14□□□□□ -1.11
CPNE9-205ENST00000613455 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
CPNE9-205ENST00000613455 TNP1P09430 55 aa8.09□□□□□ -1.11
CPNE9-205ENST00000613455 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
CPNE9-205ENST00000613455 KRTAP10-12P60413 245 aa8□□□□□ -1.13
CPNE9-205ENST00000613455 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
CPNE9-205ENST00000613455 KTN1-AS1Q86SY8 53 aa7.96□□□□□ -1.14
CPNE9-205ENST00000613455 PRAC1Q96KF2 57 aa7.9□□□□□ -1.14
CPNE9-205ENST00000613455 KMT2DO14686 5537 aa7.88□□□□□ -1.15
CPNE9-205ENST00000613455 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
CPNE9-205ENST00000613455 KRTAP4-8A0A0G2JLE6 195 aa7.83□□□□□ -1.16
CPNE9-205ENST00000613455 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
CPNE9-205ENST00000613455 KRTAP23-1A1A580 65 aa7.8□□□□□ -1.16
CPNE9-205ENST00000613455 MACF1Q9UPN3 7388 aaKnown RBP7.73□□□□□ -1.17
CPNE9-205ENST00000613455 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
CPNE9-205ENST00000613455 KRTAP8-1Q8IUC2 63 aa7.66□□□□□ -1.18
CPNE9-205ENST00000613455 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
CPNE9-205ENST00000613455 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
CPNE9-205ENST00000613455 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
CPNE9-205ENST00000613455 KRTAP19-7Q3SYF9 63 aa7.55□□□□□ -1.2
CPNE9-205ENST00000613455 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
CPNE9-205ENST00000613455 SVIPQ8NHG7 77 aa7.5□□□□□ -1.21
CPNE9-205ENST00000613455 MT1EP04732 61 aa7.42□□□□□ -1.22
CPNE9-205ENST00000613455 KRTAP5-9P26371 169 aa7.41□□□□□ -1.22
CPNE9-205ENST00000613455 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.23
CPNE9-205ENST00000613455 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
CPNE9-205ENST00000613455 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
CPNE9-205ENST00000613455 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
CPNE9-205ENST00000613455 KRTAP9-7A8MTY7 169 aa7.27□□□□□ -1.25
CPNE9-205ENST00000613455 MT1LQ93083 61 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms