RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 KRTAP3-1Q9BYR8 98 aa9.52□□□□□ -0.89
TNIP1-221ENST00000610874 A8MUU9 505 aa9.5□□□□□ -0.89
TNIP1-221ENST00000610874 C20orf166-AS1Q96NR2 134 aa9.5□□□□□ -0.89
TNIP1-221ENST00000610874 A0A1B0GU33 70 aa9.48□□□□□ -0.89
TNIP1-221ENST00000610874 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
TNIP1-221ENST00000610874 H1FX-AS1Q4G0G2 97 aa9.42□□□□□ -0.9
TNIP1-221ENST00000610874 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
TNIP1-221ENST00000610874 MT1HL1P0DM35 61 aa9.32□□□□□ -0.92
TNIP1-221ENST00000610874 ABCA13Q86UQ4 5058 aa9.32□□□□□ -0.92
TNIP1-221ENST00000610874 COX6B2Q6YFQ2 88 aa9.31□□□□□ -0.92
TNIP1-221ENST00000610874 KRTAP25-1Q3LHN0 102 aa9.29□□□□□ -0.92
TNIP1-221ENST00000610874 CRIPTQ9P021 101 aa9.24□□□□□ -0.93
TNIP1-221ENST00000610874 K7ERS5 55 aa9.22□□□□□ -0.93
TNIP1-221ENST00000610874 LPAP08519 4548 aa9.19□□□□□ -0.94
TNIP1-221ENST00000610874 LRP2P98164 4655 aa9.17□□□□□ -0.94
TNIP1-221ENST00000610874 XP32Q5T750 250 aa9.16□□□□□ -0.94
TNIP1-221ENST00000610874 HERC2O95714 4834 aa9.14□□□□□ -0.95
TNIP1-221ENST00000610874 A0A0D9SG42 100 aa9.09□□□□□ -0.95
TNIP1-221ENST00000610874 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
TNIP1-221ENST00000610874 KRTAP10-6P60371 365 aaPredicted RBP9.09□□□□□ -0.95
TNIP1-221ENST00000610874 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
TNIP1-221ENST00000610874 H3BS24 57 aa9.08□□□□□ -0.96
TNIP1-221ENST00000610874 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
TNIP1-221ENST00000610874 ROMO1P60602 79 aa9.06□□□□□ -0.96
TNIP1-221ENST00000610874 BIRC6Q9NR09 4857 aa9.03□□□□□ -0.96
TNIP1-221ENST00000610874 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
TNIP1-221ENST00000610874 S4R3F8 94 aa9□□□□□ -0.97
TNIP1-221ENST00000610874 P0C880 135 aa8.94□□□□□ -0.98
TNIP1-221ENST00000610874 J3QL48 77 aa8.93□□□□□ -0.98
TNIP1-221ENST00000610874 TPRXLQ17RH7 258 aa8.9□□□□□ -0.98
TNIP1-221ENST00000610874 PCLOQ9Y6V0 5065 aa8.87□□□□□ -0.99
TNIP1-221ENST00000610874 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
TNIP1-221ENST00000610874 HERC1Q15751 4861 aa8.82□□□□□ -1
TNIP1-221ENST00000610874 KRTAP12-2P59991 146 aa8.8□□□□□ -1
TNIP1-221ENST00000610874 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
TNIP1-221ENST00000610874 MUC2Q02817 5179 aa8.75□□□□□ -1.01
TNIP1-221ENST00000610874 KRTAP12-1P59990 96 aa8.69□□□□□ -1.02
TNIP1-221ENST00000610874 MUC17Q685J3 4493 aa8.65□□□□□ -1.03
TNIP1-221ENST00000610874 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
TNIP1-221ENST00000610874 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
TNIP1-221ENST00000610874 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
TNIP1-221ENST00000610874 M0QZ58 72 aa8.55□□□□□ -1.04
TNIP1-221ENST00000610874 KRTAP15-1Q3LI76 137 aa8.5□□□□□ -1.05
TNIP1-221ENST00000610874 NDUFAF8A1L188 74 aa8.44□□□□□ -1.06
TNIP1-221ENST00000610874 R4GN34 69 aa8.39□□□□□ -1.07
TNIP1-221ENST00000610874 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
TNIP1-221ENST00000610874 UBR4Q5T4S7 5183 aa8.36□□□□□ -1.07
TNIP1-221ENST00000610874 FAT4Q6V0I7 4981 aa8.33□□□□□ -1.08
TNIP1-221ENST00000610874 KRTAP19-2Q3LHN2 52 aa8.31□□□□□ -1.08
TNIP1-221ENST00000610874 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
TNIP1-221ENST00000610874 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
TNIP1-221ENST00000610874 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
TNIP1-221ENST00000610874 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
TNIP1-221ENST00000610874 CAMK2N1Q7Z7J9 78 aa8.01□□□□□ -1.13
TNIP1-221ENST00000610874 M0R2T5 61 aa7.9□□□□□ -1.14
TNIP1-221ENST00000610874 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
TNIP1-221ENST00000610874 MT1HP80294 61 aa7.84□□□□□ -1.15
TNIP1-221ENST00000610874 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
TNIP1-221ENST00000610874 TNP1P09430 55 aa7.69□□□□□ -1.18
TNIP1-221ENST00000610874 MT1FP04733 61 aa7.62□□□□□ -1.19
TNIP1-221ENST00000610874 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
TNIP1-221ENST00000610874 MT2AP02795 61 aa7.61□□□□□ -1.19
TNIP1-221ENST00000610874 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
TNIP1-221ENST00000610874 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
TNIP1-221ENST00000610874 A0A0A0MQY5 61 aa7.54□□□□□ -1.2
TNIP1-221ENST00000610874 SPRR2GQ9BYE4 73 aa7.51□□□□□ -1.21
TNIP1-221ENST00000610874 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
TNIP1-221ENST00000610874 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.22
TNIP1-221ENST00000610874 USH2AO75445 5202 aa7.3□□□□□ -1.24
TNIP1-221ENST00000610874 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
TNIP1-221ENST00000610874 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
TNIP1-221ENST00000610874 MT1BP07438 61 aa7.23□□□□□ -1.25
TNIP1-221ENST00000610874 LCE2AQ5TA79 106 aaPredicted RBP7.23□□□□□ -1.25
TNIP1-221ENST00000610874 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
TNIP1-221ENST00000610874 LCE2BO14633 110 aa7.11□□□□□ -1.27
TNIP1-221ENST00000610874 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
TNIP1-221ENST00000610874 MT1XP80297 61 aa7.08□□□□□ -1.28
TNIP1-221ENST00000610874 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
TNIP1-221ENST00000610874 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
TNIP1-221ENST00000610874 KMT2DO14686 5537 aa6.94□□□□□ -1.3
TNIP1-221ENST00000610874 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
TNIP1-221ENST00000610874 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
TNIP1-221ENST00000610874 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
TNIP1-221ENST00000610874 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
TNIP1-221ENST00000610874 SSPOA2VEC9 5147 aa6.8□□□□□ -1.32
TNIP1-221ENST00000610874 INE1O15225 51 aa6.66□□□□□ -1.34
TNIP1-221ENST00000610874 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
TNIP1-221ENST00000610874 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
TNIP1-221ENST00000610874 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
TNIP1-221ENST00000610874 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
TNIP1-221ENST00000610874 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
TNIP1-221ENST00000610874 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
TNIP1-221ENST00000610874 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
TNIP1-221ENST00000610874 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
TNIP1-221ENST00000610874 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
TNIP1-221ENST00000610874 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
TNIP1-221ENST00000610874 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
TNIP1-221ENST00000610874 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
TNIP1-221ENST00000610874 MT1EP04732 61 aa6.15□□□□□ -1.43
TNIP1-221ENST00000610874 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms