RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
SYNPO2-206ENST00000610556 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
SYNPO2-206ENST00000610556 KRTAP3-1Q9BYR8 98 aa3.59□□□□□ -1.83
SYNPO2-206ENST00000610556 APOBP04114 4563 aaKnown RBP3.58□□□□□ -1.84
SYNPO2-206ENST00000610556 R4GN34 69 aa3.58□□□□□ -1.84
SYNPO2-206ENST00000610556 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
SYNPO2-206ENST00000610556 M0QZ58 72 aa3.57□□□□□ -1.84
SYNPO2-206ENST00000610556 XP32Q5T750 250 aa3.56□□□□□ -1.84
SYNPO2-206ENST00000610556 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
SYNPO2-206ENST00000610556 P0C880 135 aa3.54□□□□□ -1.84
SYNPO2-206ENST00000610556 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
SYNPO2-206ENST00000610556 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
SYNPO2-206ENST00000610556 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
SYNPO2-206ENST00000610556 EPPK1P58107 5090 aaKnown RBP3.51□□□□□ -1.85
SYNPO2-206ENST00000610556 HSPG2P98160 4391 aa3.51□□□□□ -1.85
SYNPO2-206ENST00000610556 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
SYNPO2-206ENST00000610556 SEC61BP60468 96 aaKnown RBP3.49□□□□□ -1.85
SYNPO2-206ENST00000610556 TNXBP22105 4242 aa3.47□□□□□ -1.85
SYNPO2-206ENST00000610556 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
SYNPO2-206ENST00000610556 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SYNPO2-206ENST00000610556 FAT1Q14517 4588 aa3.45□□□□□ -1.86
SYNPO2-206ENST00000610556 KRTAP10-6P60371 365 aaPredicted RBP3.44□□□□□ -1.86
SYNPO2-206ENST00000610556 KRTAP10-4P60372 401 aaPredicted RBP3.43□□□□□ -1.86
SYNPO2-206ENST00000610556 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
SYNPO2-206ENST00000610556 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
SYNPO2-206ENST00000610556 RYR1P21817 5038 aa3.41□□□□□ -1.86
SYNPO2-206ENST00000610556 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
SYNPO2-206ENST00000610556 M0R2T5 61 aa3.39□□□□□ -1.87
SYNPO2-206ENST00000610556 KRTAP3-3Q9BYR6 98 aa3.39□□□□□ -1.87
SYNPO2-206ENST00000610556 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
SYNPO2-206ENST00000610556 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
SYNPO2-206ENST00000610556 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
SYNPO2-206ENST00000610556 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
SYNPO2-206ENST00000610556 MYCBP2O75592 4640 aa3.34□□□□□ -1.88
SYNPO2-206ENST00000610556 MT1HL1P0DM35 61 aa3.32□□□□□ -1.88
SYNPO2-206ENST00000610556 HERC2O95714 4834 aa3.31□□□□□ -1.88
SYNPO2-206ENST00000610556 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
SYNPO2-206ENST00000610556 LCE2DQ5TA82 110 aaPredicted RBP3.29□□□□□ -1.88
SYNPO2-206ENST00000610556 KIAA1109Q2LD37 5005 aa3.29□□□□□ -1.88
SYNPO2-206ENST00000610556 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
SYNPO2-206ENST00000610556 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
SYNPO2-206ENST00000610556 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
SYNPO2-206ENST00000610556 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
SYNPO2-206ENST00000610556 KRTAP4-5Q9BYR2 181 aa3.24□□□□□ -1.89
SYNPO2-206ENST00000610556 TNP1P09430 55 aa3.24□□□□□ -1.89
SYNPO2-206ENST00000610556 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
SYNPO2-206ENST00000610556 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
SYNPO2-206ENST00000610556 LPAP08519 4548 aa3.14□□□□□ -1.91
SYNPO2-206ENST00000610556 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
SYNPO2-206ENST00000610556 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
SYNPO2-206ENST00000610556 LRP2P98164 4655 aa3.11□□□□□ -1.91
SYNPO2-206ENST00000610556 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
SYNPO2-206ENST00000610556 HERC1Q15751 4861 aa3.09□□□□□ -1.92
SYNPO2-206ENST00000610556 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
SYNPO2-206ENST00000610556 HMCN2Q8NDA2 5059 aa3.07□□□□□ -1.92
SYNPO2-206ENST00000610556 FLGP20930 4061 aaPredicted RBP3.02□□□□□ -1.93
SYNPO2-206ENST00000610556 MUC2Q02817 5179 aa2.93□□□□□ -1.94
SYNPO2-206ENST00000610556 LCE2BO14633 110 aa2.92□□□□□ -1.94
SYNPO2-206ENST00000610556 LCE2CQ5TA81 110 aa2.89□□□□□ -1.95
SYNPO2-206ENST00000610556 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
SYNPO2-206ENST00000610556 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
SYNPO2-206ENST00000610556 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
SYNPO2-206ENST00000610556 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
SYNPO2-206ENST00000610556 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
SYNPO2-206ENST00000610556 LCE2AQ5TA79 106 aaPredicted RBP2.83□□□□□ -1.96
SYNPO2-206ENST00000610556 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
SYNPO2-206ENST00000610556 MT1HP80294 61 aa2.8□□□□□ -1.96
SYNPO2-206ENST00000610556 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
SYNPO2-206ENST00000610556 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
SYNPO2-206ENST00000610556 INE1O15225 51 aa2.79□□□□□ -1.96
SYNPO2-206ENST00000610556 MT2AP02795 61 aa2.79□□□□□ -1.96
SYNPO2-206ENST00000610556 MT1FP04733 61 aa2.79□□□□□ -1.96
SYNPO2-206ENST00000610556 KRTAP19-1Q8IUB9 90 aa2.78□□□□□ -1.96
SYNPO2-206ENST00000610556 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
SYNPO2-206ENST00000610556 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
SYNPO2-206ENST00000610556 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
SYNPO2-206ENST00000610556 KRTAP9-8Q9BYQ0 159 aa2.65□□□□□ -1.99
SYNPO2-206ENST00000610556 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
SYNPO2-206ENST00000610556 MT1XP80297 61 aa2.63□□□□□ -1.99
SYNPO2-206ENST00000610556 MT1BP07438 61 aa2.63□□□□□ -1.99
SYNPO2-206ENST00000610556 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
SYNPO2-206ENST00000610556 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
SYNPO2-206ENST00000610556 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
SYNPO2-206ENST00000610556 CRCT1Q9UGL9 99 aa2.59□□□□□ -1.99
SYNPO2-206ENST00000610556 KRTAP9-3Q9BYQ3 159 aa2.54□□□□□ -2
SYNPO2-206ENST00000610556 KRTAP4-8A0A0G2JLE6 195 aa2.53□□□□□ -2
SYNPO2-206ENST00000610556 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
SYNPO2-206ENST00000610556 KRTAP4-8Q9BYQ9 185 aa2.53□□□□□ -2
SYNPO2-206ENST00000610556 FSIP2Q5CZC0 6907 aa2.51□□□□□ -2.01
SYNPO2-206ENST00000610556 KRTAP4-7Q9BYR0 210 aa2.45□□□□□ -2.02
SYNPO2-206ENST00000610556 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
SYNPO2-206ENST00000610556 USH2AO75445 5202 aa2.42□□□□□ -2.02
SYNPO2-206ENST00000610556 KMT2DO14686 5537 aa2.38□□□□□ -2.03
SYNPO2-206ENST00000610556 MT1GP13640 62 aa2.33□□□□□ -2.04
SYNPO2-206ENST00000610556 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
SYNPO2-206ENST00000610556 MT1LQ93083 61 aa2.32□□□□□ -2.04
SYNPO2-206ENST00000610556 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
SYNPO2-206ENST00000610556 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
SYNPO2-206ENST00000610556 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
SYNPO2-206ENST00000610556 MT1EP04732 61 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms