RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
HNF4A-208ENST00000609795 COX7CP15954 63 aa8.47□□□□□ -1.05
HNF4A-208ENST00000609795 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
HNF4A-208ENST00000609795 NDUFC1O43677 76 aa8.44□□□□□ -1.06
HNF4A-208ENST00000609795 ANAPC13Q9BS18 74 aa8.38□□□□□ -1.07
HNF4A-208ENST00000609795 ACYP2P14621 99 aa8.37□□□□□ -1.07
HNF4A-208ENST00000609795 SPANXA2-OT1Q8N9U9 137 aa8.36□□□□□ -1.07
HNF4A-208ENST00000609795 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
HNF4A-208ENST00000609795 H0YAA0 97 aa8.24□□□□□ -1.09
HNF4A-208ENST00000609795 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
HNF4A-208ENST00000609795 H7BZZ5 65 aa8.23□□□□□ -1.09
HNF4A-208ENST00000609795 LCE2BO14633 110 aa8.22□□□□□ -1.09
HNF4A-208ENST00000609795 CHKB-CPT1BH3BT56 60 aa8.21□□□□□ -1.1
HNF4A-208ENST00000609795 CCDC179H3BU77 68 aa8.2□□□□□ -1.1
HNF4A-208ENST00000609795 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
HNF4A-208ENST00000609795 ADM2Q7Z4H4 148 aa8.17□□□□□ -1.1
HNF4A-208ENST00000609795 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
HNF4A-208ENST00000609795 CRCT1Q9UGL9 99 aa8.13□□□□□ -1.11
HNF4A-208ENST00000609795 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
HNF4A-208ENST00000609795 USH2AO75445 5202 aa8.11□□□□□ -1.11
HNF4A-208ENST00000609795 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
HNF4A-208ENST00000609795 KRTAP9-6A0A140TA67 174 aa8.1□□□□□ -1.11
HNF4A-208ENST00000609795 COA5Q86WW8 74 aa8.09□□□□□ -1.11
HNF4A-208ENST00000609795 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
HNF4A-208ENST00000609795 P0C880 135 aa8.03□□□□□ -1.12
HNF4A-208ENST00000609795 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
HNF4A-208ENST00000609795 ATP5EP56381 51 aaPredicted RBP7.97□□□□□ -1.13
HNF4A-208ENST00000609795 SSPOA2VEC9 5147 aa7.96□□□□□ -1.13
HNF4A-208ENST00000609795 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.14
HNF4A-208ENST00000609795 Q5VV11 94 aa7.94□□□□□ -1.14
HNF4A-208ENST00000609795 R4GN34 69 aa7.93□□□□□ -1.14
HNF4A-208ENST00000609795 TMEM258P61165 79 aa7.91□□□□□ -1.14
HNF4A-208ENST00000609795 MT1BP07438 61 aa7.9□□□□□ -1.14
HNF4A-208ENST00000609795 M0QZ58 72 aa7.88□□□□□ -1.15
HNF4A-208ENST00000609795 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
HNF4A-208ENST00000609795 SEC61GP60059 68 aa7.82□□□□□ -1.16
HNF4A-208ENST00000609795 SERP1Q9Y6X1 66 aa7.8□□□□□ -1.16
HNF4A-208ENST00000609795 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
HNF4A-208ENST00000609795 PCP4P48539 62 aa7.71□□□□□ -1.18
HNF4A-208ENST00000609795 FCGBPQ9Y6R7 5405 aaPredicted RBP7.71□□□□□ -1.18
HNF4A-208ENST00000609795 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
HNF4A-208ENST00000609795 A0A1B0GU69 56 aa7.69□□□□□ -1.18
HNF4A-208ENST00000609795 A6NN06 94 aa7.66□□□□□ -1.18
HNF4A-208ENST00000609795 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
HNF4A-208ENST00000609795 A0A1B0GU33 70 aa7.64□□□□□ -1.19
HNF4A-208ENST00000609795 KRTAP10-5P60370 271 aa7.64□□□□□ -1.19
HNF4A-208ENST00000609795 LINC01558Q9Y6Z2 57 aa7.6□□□□□ -1.19
HNF4A-208ENST00000609795 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
HNF4A-208ENST00000609795 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
HNF4A-208ENST00000609795 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
HNF4A-208ENST00000609795 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.21
HNF4A-208ENST00000609795 MT1XP80297 61 aa7.51□□□□□ -1.21
HNF4A-208ENST00000609795 A0A0D9SG42 100 aa7.48□□□□□ -1.21
HNF4A-208ENST00000609795 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
HNF4A-208ENST00000609795 SMIM26A0A096LP01 95 aa7.43□□□□□ -1.22
HNF4A-208ENST00000609795 V9GYY9 64 aa7.42□□□□□ -1.22
HNF4A-208ENST00000609795 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
HNF4A-208ENST00000609795 Q1T7F1 81 aa7.39□□□□□ -1.23
HNF4A-208ENST00000609795 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
HNF4A-208ENST00000609795 A8MU10 97 aa7.35□□□□□ -1.23
HNF4A-208ENST00000609795 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
HNF4A-208ENST00000609795 UQCR11O14957 56 aa7.34□□□□□ -1.23
HNF4A-208ENST00000609795 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
HNF4A-208ENST00000609795 KRTAP9-7A8MTY7 169 aa7.33□□□□□ -1.24
HNF4A-208ENST00000609795 PSPHP1O15172 72 aa7.3□□□□□ -1.24
HNF4A-208ENST00000609795 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
HNF4A-208ENST00000609795 SYNE2Q8WXH0 6885 aaKnown RBP7.27□□□□□ -1.25
HNF4A-208ENST00000609795 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
HNF4A-208ENST00000609795 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.26
HNF4A-208ENST00000609795 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
HNF4A-208ENST00000609795 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
HNF4A-208ENST00000609795 A6NED7 52 aa7.08□□□□□ -1.28
HNF4A-208ENST00000609795 KMT2DO14686 5537 aa7.07□□□□□ -1.28
HNF4A-208ENST00000609795 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
HNF4A-208ENST00000609795 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
HNF4A-208ENST00000609795 KRTAP5-9P26371 169 aa7.04□□□□□ -1.28
HNF4A-208ENST00000609795 KRTAP8-1Q8IUC2 63 aa7.04□□□□□ -1.28
HNF4A-208ENST00000609795 K7ERS5 55 aa7□□□□□ -1.29
HNF4A-208ENST00000609795 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
HNF4A-208ENST00000609795 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
HNF4A-208ENST00000609795 TNP1P09430 55 aa6.9□□□□□ -1.3
HNF4A-208ENST00000609795 MUC12Q9UKN1 5478 aa6.86□□□□□ -1.31
HNF4A-208ENST00000609795 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
HNF4A-208ENST00000609795 NEBP20929 6669 aa6.78□□□□□ -1.32
HNF4A-208ENST00000609795 SPRR2EP22531 72 aa6.73□□□□□ -1.33
HNF4A-208ENST00000609795 SPRR2BP35325 72 aa6.73□□□□□ -1.33
HNF4A-208ENST00000609795 SPRR2AP35326 72 aa6.73□□□□□ -1.33
HNF4A-208ENST00000609795 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
HNF4A-208ENST00000609795 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
HNF4A-208ENST00000609795 MDN1Q9NU22 5596 aa6.7□□□□□ -1.34
HNF4A-208ENST00000609795 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
HNF4A-208ENST00000609795 LCE1AQ5T7P2 110 aa6.7□□□□□ -1.34
HNF4A-208ENST00000609795 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
HNF4A-208ENST00000609795 MT1EP04732 61 aa6.63□□□□□ -1.35
HNF4A-208ENST00000609795 ROMO1P60602 79 aa6.6□□□□□ -1.35
HNF4A-208ENST00000609795 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
HNF4A-208ENST00000609795 SPRR2DP22532 72 aa6.5□□□□□ -1.37
HNF4A-208ENST00000609795 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
HNF4A-208ENST00000609795 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
HNF4A-208ENST00000609795 KRTAP20-1Q3LI63 56 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms