RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 CSAG1Q6PB30 78 aa10.31□□□□□ -0.76
NECAB3-221ENST00000607055 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
NECAB3-221ENST00000607055 SPANXA2-OT1Q8N9U9 137 aa10.29□□□□□ -0.76
NECAB3-221ENST00000607055 CYSTM1Q9H1C7 97 aa10.27□□□□□ -0.77
NECAB3-221ENST00000607055 CCDC179H3BU77 68 aa10.26□□□□□ -0.77
NECAB3-221ENST00000607055 NDUFC1O43677 76 aa10.26□□□□□ -0.77
NECAB3-221ENST00000607055 MT2AP02795 61 aa10.26□□□□□ -0.77
NECAB3-221ENST00000607055 ACYP2P14621 99 aa10.25□□□□□ -0.77
NECAB3-221ENST00000607055 H7BZZ5 65 aa10.21□□□□□ -0.77
NECAB3-221ENST00000607055 MT1FP04733 61 aa10.19□□□□□ -0.78
NECAB3-221ENST00000607055 KRTAP10-10P60014 251 aa10.17□□□□□ -0.78
NECAB3-221ENST00000607055 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
NECAB3-221ENST00000607055 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
NECAB3-221ENST00000607055 FSIP2Q5CZC0 6907 aa10.08□□□□□ -0.8
NECAB3-221ENST00000607055 CRCT1Q9UGL9 99 aa10.06□□□□□ -0.8
NECAB3-221ENST00000607055 SPTSSBQ8NFR3 76 aa10.01□□□□□ -0.81
NECAB3-221ENST00000607055 COA5Q86WW8 74 aa10□□□□□ -0.81
NECAB3-221ENST00000607055 KRTAP9-3Q9BYQ3 159 aa9.98□□□□□ -0.81
NECAB3-221ENST00000607055 H0YAA0 97 aa9.97□□□□□ -0.81
NECAB3-221ENST00000607055 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
NECAB3-221ENST00000607055 ATP5EP56381 51 aaPredicted RBP9.9□□□□□ -0.82
NECAB3-221ENST00000607055 TMEM258P61165 79 aa9.88□□□□□ -0.83
NECAB3-221ENST00000607055 LCE2BO14633 110 aa9.82□□□□□ -0.84
NECAB3-221ENST00000607055 P0C880 135 aa9.79□□□□□ -0.84
NECAB3-221ENST00000607055 PCP4P48539 62 aa9.79□□□□□ -0.84
NECAB3-221ENST00000607055 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
NECAB3-221ENST00000607055 CRIPTQ9P021 101 aa9.77□□□□□ -0.85
NECAB3-221ENST00000607055 KRTAP19-1Q8IUB9 90 aa9.76□□□□□ -0.85
NECAB3-221ENST00000607055 SPRR2GQ9BYE4 73 aa9.72□□□□□ -0.85
NECAB3-221ENST00000607055 USH2AO75445 5202 aa9.72□□□□□ -0.85
NECAB3-221ENST00000607055 R4GN34 69 aa9.63□□□□□ -0.87
NECAB3-221ENST00000607055 SEC61GP60059 68 aa9.6□□□□□ -0.87
NECAB3-221ENST00000607055 M0QZ58 72 aa9.59□□□□□ -0.87
NECAB3-221ENST00000607055 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
NECAB3-221ENST00000607055 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
NECAB3-221ENST00000607055 Q5VV11 94 aa9.54□□□□□ -0.88
NECAB3-221ENST00000607055 MT1BP07438 61 aa9.5□□□□□ -0.89
NECAB3-221ENST00000607055 SSPOA2VEC9 5147 aa9.5□□□□□ -0.89
NECAB3-221ENST00000607055 A0A1B0GU69 56 aa9.48□□□□□ -0.89
NECAB3-221ENST00000607055 LINC01554Q52M75 96 aa9.44□□□□□ -0.9
NECAB3-221ENST00000607055 LINC01558Q9Y6Z2 57 aa9.4□□□□□ -0.9
NECAB3-221ENST00000607055 KRTAP13-4Q3LI77 160 aa9.39□□□□□ -0.91
NECAB3-221ENST00000607055 A0A1B0GU33 70 aa9.38□□□□□ -0.91
NECAB3-221ENST00000607055 KRTAP9-7A8MTY7 169 aa9.38□□□□□ -0.91
NECAB3-221ENST00000607055 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.38□□□□□ -0.91
NECAB3-221ENST00000607055 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
NECAB3-221ENST00000607055 KRTAP19-6Q3LI70 58 aa9.35□□□□□ -0.91
NECAB3-221ENST00000607055 PLAC4Q8WY50 150 aa9.3□□□□□ -0.92
NECAB3-221ENST00000607055 SPATA8Q6RVD6 105 aa9.28□□□□□ -0.92
NECAB3-221ENST00000607055 RPS28P62857 69 aaKnown RBP9.24□□□□□ -0.93
NECAB3-221ENST00000607055 SMIM26A0A096LP01 95 aa9.23□□□□□ -0.93
NECAB3-221ENST00000607055 V9GYY9 64 aa9.21□□□□□ -0.94
NECAB3-221ENST00000607055 FCGBPQ9Y6R7 5405 aaPredicted RBP9.19□□□□□ -0.94
NECAB3-221ENST00000607055 A0A0D9SG42 100 aa9.19□□□□□ -0.94
NECAB3-221ENST00000607055 A6NN06 94 aa9.18□□□□□ -0.94
NECAB3-221ENST00000607055 Q1T7F1 81 aa9.18□□□□□ -0.94
NECAB3-221ENST00000607055 KRTAP10-5P60370 271 aa9.15□□□□□ -0.94
NECAB3-221ENST00000607055 PSPHP1O15172 72 aa9.11□□□□□ -0.95
NECAB3-221ENST00000607055 A8MU10 97 aa9.06□□□□□ -0.96
NECAB3-221ENST00000607055 UQCR11O14957 56 aa9.06□□□□□ -0.96
NECAB3-221ENST00000607055 MT1XP80297 61 aa9.05□□□□□ -0.96
NECAB3-221ENST00000607055 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
NECAB3-221ENST00000607055 SPINT4Q6UDR6 99 aa9.02□□□□□ -0.97
NECAB3-221ENST00000607055 KRTAP12-1P59990 96 aa8.99□□□□□ -0.97
NECAB3-221ENST00000607055 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.98
NECAB3-221ENST00000607055 MACF1Q9UPN3 7388 aaKnown RBP8.95□□□□□ -0.98
NECAB3-221ENST00000607055 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
NECAB3-221ENST00000607055 SYNE2Q8WXH0 6885 aaKnown RBP8.92□□□□□ -0.98
NECAB3-221ENST00000607055 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
NECAB3-221ENST00000607055 A6NED7 52 aa8.83□□□□□ -1
NECAB3-221ENST00000607055 KRTAP10-7P60409 375 aaPredicted RBP8.67□□□□□ -1.02
NECAB3-221ENST00000607055 K7ERS5 55 aa8.63□□□□□ -1.03
NECAB3-221ENST00000607055 KRTAP6-3Q3LI67 103 aa8.61□□□□□ -1.03
NECAB3-221ENST00000607055 KRTAP10-12P60413 245 aa8.59□□□□□ -1.03
NECAB3-221ENST00000607055 CDC42SE1Q9NRR8 79 aa8.55□□□□□ -1.04
NECAB3-221ENST00000607055 C10orf95Q9H7T3 257 aa8.54□□□□□ -1.04
NECAB3-221ENST00000607055 KRTAP4-8A0A0G2JLE6 195 aa8.49□□□□□ -1.05
NECAB3-221ENST00000607055 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
NECAB3-221ENST00000607055 KMT2DO14686 5537 aa8.49□□□□□ -1.05
NECAB3-221ENST00000607055 KRTAP8-1Q8IUC2 63 aa8.45□□□□□ -1.06
NECAB3-221ENST00000607055 NEBP20929 6669 aa8.41□□□□□ -1.06
NECAB3-221ENST00000607055 TNP1P09430 55 aa8.4□□□□□ -1.06
NECAB3-221ENST00000607055 MUC12Q9UKN1 5478 aa8.36□□□□□ -1.07
NECAB3-221ENST00000607055 KRTAP5-9P26371 169 aa8.34□□□□□ -1.07
NECAB3-221ENST00000607055 SPRR2FQ96RM1 72 aa8.28□□□□□ -1.08
NECAB3-221ENST00000607055 BRK1Q8WUW1 75 aa8.27□□□□□ -1.09
NECAB3-221ENST00000607055 KRTAP20-1Q3LI63 56 aa8.22□□□□□ -1.09
NECAB3-221ENST00000607055 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.1
NECAB3-221ENST00000607055 ROMO1P60602 79 aa8.17□□□□□ -1.1
NECAB3-221ENST00000607055 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
NECAB3-221ENST00000607055 MDN1Q9NU22 5596 aa8.11□□□□□ -1.11
NECAB3-221ENST00000607055 KRTAP19-7Q3SYF9 63 aa8.08□□□□□ -1.12
NECAB3-221ENST00000607055 KRTAP19-5Q3LI72 72 aa8.06□□□□□ -1.12
NECAB3-221ENST00000607055 SPRR2EP22531 72 aa8.03□□□□□ -1.12
NECAB3-221ENST00000607055 SPRR2BP35325 72 aa8.03□□□□□ -1.12
NECAB3-221ENST00000607055 SPRR2AP35326 72 aa8.03□□□□□ -1.12
NECAB3-221ENST00000607055 MT1EP04732 61 aa7.99□□□□□ -1.13
NECAB3-221ENST00000607055 LCE1AQ5T7P2 110 aa7.98□□□□□ -1.13
NECAB3-221ENST00000607055 KRTAP23-1A1A580 65 aa7.9□□□□□ -1.14
NECAB3-221ENST00000607055 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms