RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 NISCHQ9Y2I1 1504 aa51.31■■■■■ 5.8
NECAB3-221ENST00000607055 CCDC180Q9P1Z9 1646 aa45.3■■■■■ 4.84
NECAB3-221ENST00000607055 ABCC9O60706 1549 aa43.83■■■■■ 4.61
NECAB3-221ENST00000607055 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
NECAB3-221ENST00000607055 DCAF8L2P0C7V8 631 aa42.73■■■■■ 4.43
NECAB3-221ENST00000607055 NACADO15069 1562 aa42.45■■■■■ 4.39
NECAB3-221ENST00000607055 DCAF1Q9Y4B6 1507 aa42.43■■■■■ 4.38
NECAB3-221ENST00000607055 RB1CC1Q8TDY2 1594 aa42.37■■■■■ 4.37
NECAB3-221ENST00000607055 MYO15BQ96JP2 1530 aa42.36■■■■■ 4.37
NECAB3-221ENST00000607055 SCRIBQ14160 1630 aa41.47■■■■■ 4.23
NECAB3-221ENST00000607055 UNC13AQ9UPW8 1703 aa41.39■■■■■ 4.22
NECAB3-221ENST00000607055 PABPN1Q86U42 306 aaKnown RBP eCLIP41.09■■■■■ 4.17
NECAB3-221ENST00000607055 BICRAQ9NZM4 1560 aa41.06■■■■■ 4.16
NECAB3-221ENST00000607055 SHROOM4Q9ULL8 1493 aa41.03■■■■■ 4.16
NECAB3-221ENST00000607055 CECR2Q9BXF3 1484 aa39.94■■■■□ 3.98
NECAB3-221ENST00000607055 EIF4G1Q04637 1599 aaKnown RBP39.94■■■■□ 3.98
NECAB3-221ENST00000607055 BAZ1AQ9NRL2 1556 aaPredicted RBP39.72■■■■□ 3.95
NECAB3-221ENST00000607055 SMARCA4P51532 1647 aa39.69■■■■□ 3.94
NECAB3-221ENST00000607055 DNAJC5BQ9UF47 199 aa39.64■■■■□ 3.94
NECAB3-221ENST00000607055 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
NECAB3-221ENST00000607055 MROH2BQ7Z745 1585 aa39.59■■■■□ 3.93
NECAB3-221ENST00000607055 RSF1Q96T23 1441 aaPredicted RBP39.35■■■■□ 3.89
NECAB3-221ENST00000607055 ATAD2BQ9ULI0 1458 aa39.31■■■■□ 3.88
NECAB3-221ENST00000607055 SMARCA2P51531 1590 aa39.28■■■■□ 3.88
NECAB3-221ENST00000607055 PEG3Q9GZU2 1588 aa39.24■■■■□ 3.87
NECAB3-221ENST00000607055 WIZO95785 1651 aa39.19■■■■□ 3.86
NECAB3-221ENST00000607055 NCAPD3P42695 1498 aa39.17■■■■□ 3.86
NECAB3-221ENST00000607055 BAZ1BQ9UIG0 1483 aaKnown RBP39.05■■■■□ 3.84
NECAB3-221ENST00000607055 HMGXB3Q12766 1538 aa39.04■■■■□ 3.84
NECAB3-221ENST00000607055 SUPT5HO00267 1087 aaKnown RBP38.92■■■■□ 3.82
NECAB3-221ENST00000607055 TOP2AP11388 1531 aaKnown RBP38.8■■■■□ 3.8
NECAB3-221ENST00000607055 CCDC88BA6NC98 1476 aa38.35■■■■□ 3.73
NECAB3-221ENST00000607055 NESP48681 1621 aa38.1■■■■□ 3.69
NECAB3-221ENST00000607055 CADPSQ9ULU8 1353 aa38.09■■■■□ 3.69
NECAB3-221ENST00000607055 LAMC3Q9Y6N6 1575 aa38.04■■■■□ 3.68
NECAB3-221ENST00000607055 CFTRP13569 1480 aa37.98■■■■□ 3.67
NECAB3-221ENST00000607055 PDS5BQ9NTI5 1447 aa37.78■■■■□ 3.64
NECAB3-221ENST00000607055 ERCC6Q03468 1493 aa37.72■■■■□ 3.63
NECAB3-221ENST00000607055 PRDM2Q13029 1718 aa37.71■■■■□ 3.63
NECAB3-221ENST00000607055 FANCD2Q9BXW9 1451 aa37.67■■■■□ 3.62
NECAB3-221ENST00000607055 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.62
NECAB3-221ENST00000607055 CEP164Q9UPV0 1460 aa37.56■■■■□ 3.6
NECAB3-221ENST00000607055 MRC2Q9UBG0 1479 aa37.38■■■■□ 3.57
NECAB3-221ENST00000607055 THOC2Q8NI27 1593 aaKnown RBP37.34■■■■□ 3.57
NECAB3-221ENST00000607055 URB2Q14146 1524 aaKnown RBP37.26■■■■□ 3.55
NECAB3-221ENST00000607055 WDR62O43379 1518 aa37.2■■■■□ 3.55
NECAB3-221ENST00000607055 ABCC8Q09428 1581 aa37.17■■■■□ 3.54
NECAB3-221ENST00000607055 TOPBP1Q92547 1522 aa37.14■■■■□ 3.54
NECAB3-221ENST00000607055 DNMBPQ6XZF7 1577 aa37.13■■■■□ 3.53
NECAB3-221ENST00000607055 CUX1P39880 1505 aa37.1■■■■□ 3.53
NECAB3-221ENST00000607055 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.536e-7■■■■■ 33.4
NECAB3-221ENST00000607055 CUX2O14529 1486 aa37.03■■■■□ 3.52
NECAB3-221ENST00000607055 SYNJ1O43426 1573 aa36.97■■■■□ 3.51
NECAB3-221ENST00000607055 TOP2BQ02880 1626 aa36.92■■■■□ 3.5
NECAB3-221ENST00000607055 BIVM-ERCC5R4GMW8 1640 aa36.9■■■■□ 3.5
NECAB3-221ENST00000607055 FGD5Q6ZNL6 1462 aa36.88■■■■□ 3.49
NECAB3-221ENST00000607055 POLA1P09884 1462 aaPredicted RBP36.86■■■■□ 3.49
NECAB3-221ENST00000607055 SOGA1O94964 1423 aa36.74■■■■□ 3.47
NECAB3-221ENST00000607055 IFT140Q96RY7 1462 aa36.74■■■■□ 3.47
NECAB3-221ENST00000607055 RAD54L2Q9Y4B4 1467 aa36.73■■■■□ 3.47
NECAB3-221ENST00000607055 TRIM41Q8WV44 630 aa36.69■■■■□ 3.46
NECAB3-221ENST00000607055 TARBP1Q13395 1621 aaKnown RBP36.66■■■■□ 3.46
NECAB3-221ENST00000607055 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
NECAB3-221ENST00000607055 ZNF608Q9ULD9 1512 aaPredicted RBP36.54■■■■□ 3.44
NECAB3-221ENST00000607055 ABCA10Q8WWZ4 1543 aa36.52■■■■□ 3.44
NECAB3-221ENST00000607055 WDR97A6NE52 1622 aa36.5■■■■□ 3.43
NECAB3-221ENST00000607055 TDRD9Q8NDG6 1382 aaKnown RBP36.48■■■■□ 3.43
NECAB3-221ENST00000607055 AQRO60306 1485 aaKnown RBP eCLIP36.43■■■■□ 3.422e-8■■■■■ 36.9
NECAB3-221ENST00000607055 EIF4G3O43432 1585 aaKnown RBP36.4■■■■□ 3.42
NECAB3-221ENST00000607055 ABCA5Q8WWZ7 1642 aa36.32■■■■□ 3.4
NECAB3-221ENST00000607055 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
NECAB3-221ENST00000607055 KIF27Q86VH2 1401 aa36.27■■■■□ 3.4
NECAB3-221ENST00000607055 GRIN2BQ13224 1484 aa36.22■■■■□ 3.39
NECAB3-221ENST00000607055 PBRM1Q86U86 1689 aa36.18■■■■□ 3.38
NECAB3-221ENST00000607055 RUSC2Q8N2Y8 1516 aa36.17■■■■□ 3.38
NECAB3-221ENST00000607055 SNAPC4Q5SXM2 1469 aa36.11■■■■□ 3.37
NECAB3-221ENST00000607055 ERICH3Q5RHP9 1530 aa36.08■■■■□ 3.37
NECAB3-221ENST00000607055 IGF1RP08069 1367 aa36.04■■■■□ 3.36
NECAB3-221ENST00000607055 MAGI1Q96QZ7 1491 aaPredicted RBP36.04■■■■□ 3.36
NECAB3-221ENST00000607055 FAM9AQ8IZU1 332 aaPredicted RBP35.98■■■■□ 3.35
NECAB3-221ENST00000607055 EEA1Q15075 1411 aa35.97■■■■□ 3.35
NECAB3-221ENST00000607055 ADAMTS12P58397 1594 aa35.94■■■■□ 3.34
NECAB3-221ENST00000607055 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
NECAB3-221ENST00000607055 FBLN2P98095 1184 aa35.91■■■■□ 3.34
NECAB3-221ENST00000607055 SYNJ2O15056 1496 aa35.9■■■■□ 3.34
NECAB3-221ENST00000607055 CUL7Q14999 1698 aa35.88■■■■□ 3.33
NECAB3-221ENST00000607055 CHMP7Q8WUX9 453 aaPredicted RBP35.88■■■■□ 3.33
NECAB3-221ENST00000607055 CSRNP3Q8WYN3 585 aa35.88■■■■□ 3.33
NECAB3-221ENST00000607055 CARMIL1Q5VZK9 1371 aa35.85■■■■□ 3.33
NECAB3-221ENST00000607055 CHD1O14646 1710 aa35.83■■■■□ 3.33
NECAB3-221ENST00000607055 GRIN2AQ12879 1464 aa35.75■■■■□ 3.31
NECAB3-221ENST00000607055 PRXQ9BXM0 1461 aa35.72■■■■□ 3.31
NECAB3-221ENST00000607055 RAPGEF2Q9Y4G8 1499 aa35.7■■■■□ 3.31
NECAB3-221ENST00000607055 OSCARQ8IYS5 282 aa35.65■■■■□ 3.3
NECAB3-221ENST00000607055 DNAJC5Q9H3Z4 198 aa35.61■■■■□ 3.29
NECAB3-221ENST00000607055 CEP170Q5SW79 1584 aa35.55■■■■□ 3.28
NECAB3-221ENST00000607055 KIF21BO75037 1637 aa35.55■■■■□ 3.28
NECAB3-221ENST00000607055 NUP160Q12769 1436 aa35.55■■■■□ 3.28
NECAB3-221ENST00000607055 EHMT2Q96KQ7 1210 aa35.51■■■■□ 3.28
NECAB3-221ENST00000607055 CLASP1Q7Z460 1538 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms