RNA–Protein interactions for RNA: ENST00000604864.5

NEB-219, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-219ENST00000604864 WDFY3Q8IZQ1 3526 aa1.27□□□□□ -2.21
NEB-219ENST00000604864 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
NEB-219ENST00000604864 SVEP1Q4LDE5 3571 aa1.26□□□□□ -2.21
NEB-219ENST00000604864 DNAH8Q96JB1 4490 aa1.26□□□□□ -2.21
NEB-219ENST00000604864 DMDP11532 3685 aa1.26□□□□□ -2.21
NEB-219ENST00000604864 MUC3AQ02505 3323 aa1.26□□□□□ -2.21
NEB-219ENST00000604864 MT1EP04732 61 aa1.26□□□□□ -2.21
NEB-219ENST00000604864 MT1GP13640 62 aa1.25□□□□□ -2.21
NEB-219ENST00000604864 DYNC1H1Q14204 4646 aaKnown RBP1.25□□□□□ -2.21
NEB-219ENST00000604864 LCE3EQ5T5B0 92 aa1.25□□□□□ -2.21
NEB-219ENST00000604864 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
NEB-219ENST00000604864 ANK3Q12955 4377 aaKnown RBP1.24□□□□□ -2.21
NEB-219ENST00000604864 DNAH5Q8TE73 4624 aa1.23□□□□□ -2.21
NEB-219ENST00000604864 ZFHX4Q86UP3 3567 aa1.23□□□□□ -2.21
NEB-219ENST00000604864 MYO15AQ9UKN7 3530 aa1.23□□□□□ -2.21
NEB-219ENST00000604864 MT1LQ93083 61 aa1.23□□□□□ -2.21
NEB-219ENST00000604864 LAMA5O15230 3695 aa1.22□□□□□ -2.21
NEB-219ENST00000604864 MT1AP04731 61 aa1.22□□□□□ -2.21
NEB-219ENST00000604864 MT1FP04733 61 aa1.21□□□□□ -2.21
NEB-219ENST00000604864 HSPG2P98160 4391 aa1.21□□□□□ -2.22
NEB-219ENST00000604864 KRTAP19-8Q3LI54 63 aa1.21□□□□□ -2.22
NEB-219ENST00000604864 PLECQ15149 4684 aaKnown RBP1.21□□□□□ -2.22
NEB-219ENST00000604864 RELNP78509 3460 aa1.2□□□□□ -2.22
NEB-219ENST00000604864 MT1HP80294 61 aa1.19□□□□□ -2.22
NEB-219ENST00000604864 SMG1Q96Q15 3661 aaKnown RBP1.19□□□□□ -2.22
NEB-219ENST00000604864 FAT3Q8TDW7 4589 aa1.19□□□□□ -2.22
NEB-219ENST00000604864 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
NEB-219ENST00000604864 NBPF19A0A087WUL8 3843 aa1.19□□□□□ -2.22
NEB-219ENST00000604864 ASPMQ8IZT6 3477 aa1.18□□□□□ -2.22
NEB-219ENST00000604864 RYR3Q15413 4870 aa1.18□□□□□ -2.22
NEB-219ENST00000604864 FAT1Q14517 4588 aa1.17□□□□□ -2.22
NEB-219ENST00000604864 KRTAP4-5Q9BYR2 181 aa1.16□□□□□ -2.22
NEB-219ENST00000604864 AKAP9Q99996 3911 aa1.16□□□□□ -2.22
NEB-219ENST00000604864 MYCBP2O75592 4640 aa1.16□□□□□ -2.22
NEB-219ENST00000604864 MT2AP02795 61 aa1.16□□□□□ -2.22
NEB-219ENST00000604864 DNAH9Q9NYC9 4486 aa1.16□□□□□ -2.22
NEB-219ENST00000604864 MT1MQ8N339 61 aa1.16□□□□□ -2.22
NEB-219ENST00000604864 CSMD1Q96PZ7 3565 aa1.15□□□□□ -2.22
NEB-219ENST00000604864 KRTAP4-1Q9BYQ7 146 aa1.15□□□□□ -2.23
NEB-219ENST00000604864 DNHD1Q96M86 4753 aa1.15□□□□□ -2.23
NEB-219ENST00000604864 SPENQ96T58 3664 aaKnown RBP1.13□□□□□ -2.23
NEB-219ENST00000604864 SPRR2AP35326 72 aa1.13□□□□□ -2.23
NEB-219ENST00000604864 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
NEB-219ENST00000604864 HERC1Q15751 4861 aa1.12□□□□□ -2.23
NEB-219ENST00000604864 CUBNO60494 3623 aa1.12□□□□□ -2.23
NEB-219ENST00000604864 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
NEB-219ENST00000604864 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
NEB-219ENST00000604864 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
NEB-219ENST00000604864 MT1XP80297 61 aa1.11□□□□□ -2.23
NEB-219ENST00000604864 KRTAP9-8Q9BYQ0 159 aa1.11□□□□□ -2.23
NEB-219ENST00000604864 KRTAP4-7Q9BYR0 210 aa1.11□□□□□ -2.23
NEB-219ENST00000604864 KRTAP19-1Q8IUB9 90 aa1.11□□□□□ -2.23
NEB-219ENST00000604864 LRP1Q07954 4544 aaKnown RBP1.11□□□□□ -2.23
NEB-219ENST00000604864 BSNQ9UPA5 3926 aa1.1□□□□□ -2.23
NEB-219ENST00000604864 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
NEB-219ENST00000604864 DYNC2H1Q8NCM8 4307 aaKnown RBP1.1□□□□□ -2.23
NEB-219ENST00000604864 SPRR2BP35325 72 aa1.09□□□□□ -2.23
NEB-219ENST00000604864 VPS13CQ709C8 3753 aa1.09□□□□□ -2.24
NEB-219ENST00000604864 DNAH7Q8WXX0 4024 aa1.08□□□□□ -2.24
NEB-219ENST00000604864 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
NEB-219ENST00000604864 LCE2CQ5TA81 110 aa1.08□□□□□ -2.24
NEB-219ENST00000604864 LCE2DQ5TA82 110 aaPredicted RBP1.08□□□□□ -2.24
NEB-219ENST00000604864 LYSTQ99698 3801 aa1.08□□□□□ -2.24
NEB-219ENST00000604864 CMYA5Q8N3K9 4069 aa1.07□□□□□ -2.24
NEB-219ENST00000604864 MT1BP07438 61 aa1.07□□□□□ -2.24
NEB-219ENST00000604864 ZNF469Q96JG9 3925 aaPredicted RBP1.07□□□□□ -2.24
NEB-219ENST00000604864 RYR1P21817 5038 aa1.07□□□□□ -2.24
NEB-219ENST00000604864 FRAS1Q86XX4 4008 aa1.07□□□□□ -2.24
NEB-219ENST00000604864 KRTAP17-1Q9BYP8 105 aa1.06□□□□□ -2.24
NEB-219ENST00000604864 TRRAPQ9Y4A5 3859 aa1.06□□□□□ -2.24
NEB-219ENST00000604864 KMT2CQ8NEZ4 4911 aaKnown RBP1.06□□□□□ -2.24
NEB-219ENST00000604864 HECTD4Q9Y4D8 3996 aa1.06□□□□□ -2.24
NEB-219ENST00000604864 PKHD1L1Q86WI1 4243 aa1.05□□□□□ -2.24
NEB-219ENST00000604864 KRTAP4-8A0A0G2JLE6 195 aa1.05□□□□□ -2.24
NEB-219ENST00000604864 KRTAP4-8Q9BYQ9 185 aa1.05□□□□□ -2.24
NEB-219ENST00000604864 PKD1P98161 4303 aa1.05□□□□□ -2.24
NEB-219ENST00000604864 KRTAP9-3Q9BYQ3 159 aa1.04□□□□□ -2.24
NEB-219ENST00000604864 LRP2P98164 4655 aa1.04□□□□□ -2.24
NEB-219ENST00000604864 HERC2O95714 4834 aa1.04□□□□□ -2.24
NEB-219ENST00000604864 FLGP20930 4061 aaPredicted RBP1.04□□□□□ -2.24
NEB-219ENST00000604864 LCE1AQ5T7P2 110 aa1.04□□□□□ -2.24
NEB-219ENST00000604864 LCE2BO14633 110 aa1.04□□□□□ -2.24
NEB-219ENST00000604864 DNAH3Q8TD57 4116 aa1.04□□□□□ -2.24
NEB-219ENST00000604864 KRTAP4-9Q9BYQ8 210 aa1.04□□□□□ -2.24
NEB-219ENST00000604864 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
NEB-219ENST00000604864 ANK2Q01484 3957 aa1.03□□□□□ -2.24
NEB-219ENST00000604864 LOC100996750A0A140TA64 210 aa1.03□□□□□ -2.24
NEB-219ENST00000604864 KRTAP9-4Q9BYQ2 154 aa1.02□□□□□ -2.25
NEB-219ENST00000604864 LCE2AQ5TA79 106 aaPredicted RBP1.02□□□□□ -2.25
NEB-219ENST00000604864 NEBP20929 6669 aa1.02□□□□□ -2.25
NEB-219ENST00000604864 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
NEB-219ENST00000604864 KRTAP19-6Q3LI70 58 aa1.01□□□□□ -2.25
NEB-219ENST00000604864 CSMD2Q7Z408 3487 aa1.01□□□□□ -2.25
NEB-219ENST00000604864 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
NEB-219ENST00000604864 PRKDCP78527 4128 aaKnown RBP1.01□□□□□ -2.25
NEB-219ENST00000604864 LCE3BQ5TA77 95 aa1.01□□□□□ -2.25
NEB-219ENST00000604864 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
NEB-219ENST00000604864 CSMD3Q7Z407 3707 aa1.01□□□□□ -2.25
NEB-219ENST00000604864 FAT2Q9NYQ8 4349 aa1□□□□□ -2.25
NEB-219ENST00000604864 DNAH6Q9C0G6 4158 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms