RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 LINC01556Q5JQF7 62 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 ALMS1Q8TCU4 4167 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 DNAH6Q9C0G6 4158 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 ZNF469Q96JG9 3925 aaPredicted RBP0.81□□□□□ -2.28
SGMS1-207ENST00000602619 PKD1L2Q7Z442 2459 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 VWFP04275 2813 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 APCP25054 2843 aa0.81□□□□□ -2.28
SGMS1-207ENST00000602619 ANKRD17O75179 2603 aaKnown RBP0.81□□□□□ -2.28
SGMS1-207ENST00000602619 PRKDCP78527 4128 aaKnown RBP0.8□□□□□ -2.28
SGMS1-207ENST00000602619 DNAH9Q9NYC9 4486 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 ZFYVE26Q68DK2 2539 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 IGSF10Q6WRI0 2623 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 A0A096LPF7 62 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 CLPSL2Q6UWE3 100 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 ABCA2Q9BZC7 2435 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 CUBNO60494 3623 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 FRAS1Q86XX4 4008 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 ZNF462Q96JM2 2506 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 SETD2Q9BYW2 2564 aaPredicted RBP0.8□□□□□ -2.28
SGMS1-207ENST00000602619 CSMD2Q7Z408 3487 aa0.8□□□□□ -2.28
SGMS1-207ENST00000602619 SPTBN4Q9H254 2564 aa0.79□□□□□ -2.28
SGMS1-207ENST00000602619 GCN1Q92616 2671 aaKnown RBP0.79□□□□□ -2.28
SGMS1-207ENST00000602619 K7EQZ3 153 aa0.79□□□□□ -2.28
SGMS1-207ENST00000602619 SPRR1BP22528 89 aa0.79□□□□□ -2.28
SGMS1-207ENST00000602619 DEFB135Q30KP9 77 aa0.79□□□□□ -2.28
SGMS1-207ENST00000602619 CCDC168Q8NDH2 2452 aa0.79□□□□□ -2.28
SGMS1-207ENST00000602619 MTORP42345 2549 aa0.79□□□□□ -2.28
SGMS1-207ENST00000602619 TEP1Q99973 2627 aaKnown RBP0.79□□□□□ -2.28
SGMS1-207ENST00000602619 UNC79Q9P2D8 2635 aa0.79□□□□□ -2.28
SGMS1-207ENST00000602619 DEFB131BA0A096LNP1 70 aa0.78□□□□□ -2.28
SGMS1-207ENST00000602619 HTN3P15516 51 aa0.78□□□□□ -2.28
SGMS1-207ENST00000602619 WFDC10BQ8IUB3 73 aa0.78□□□□□ -2.28
SGMS1-207ENST00000602619 DEFB105AQ8NG35 78 aa0.78□□□□□ -2.28
SGMS1-207ENST00000602619 OTOGQ6ZRI0 2925 aa0.78□□□□□ -2.29
SGMS1-207ENST00000602619 SONP18583 2426 aaKnown RBP0.77□□□□□ -2.29
SGMS1-207ENST00000602619 FLNAP21333 2647 aaKnown RBP0.77□□□□□ -2.29
SGMS1-207ENST00000602619 ITPR2Q14571 2701 aa0.77□□□□□ -2.29
SGMS1-207ENST00000602619 SACSQ9NZJ4 4579 aa0.77□□□□□ -2.29
SGMS1-207ENST00000602619 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
SGMS1-207ENST00000602619 DEFB4AO15263 64 aa0.77□□□□□ -2.29
SGMS1-207ENST00000602619 Q5VSD8 79 aa0.77□□□□□ -2.29
SGMS1-207ENST00000602619 HIVEP1P15822 2718 aa0.77□□□□□ -2.29
SGMS1-207ENST00000602619 PDZD2O15018 2839 aa0.77□□□□□ -2.29
SGMS1-207ENST00000602619 DNAH5Q8TE73 4624 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 LRP1BQ9NZR2 4599 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 VPS13BQ7Z7G8 4022 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 COX6B2Q6YFQ2 88 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 WFDC13Q8IUB5 93 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 MRPL34Q9BQ48 92 aaKnown RBP0.76□□□□□ -2.29
SGMS1-207ENST00000602619 TENM4Q6N022 2769 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 USP24Q9UPU5 2620 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 PKHD1L1Q86WI1 4243 aa0.76□□□□□ -2.29
SGMS1-207ENST00000602619 KMT2AQ03164 3969 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 PKD1L1Q8TDX9 2849 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 SRRM2Q9UQ35 2752 aaKnown RBP0.75□□□□□ -2.29
SGMS1-207ENST00000602619 NSD1Q96L73 2696 aaPredicted RBP0.75□□□□□ -2.29
SGMS1-207ENST00000602619 ATRQ13535 2644 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 ACANP16112 2415 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 A0A096LNI7 61 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 FAT2Q9NYQ8 4349 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 COL7A1Q02388 2944 aa0.75□□□□□ -2.29
SGMS1-207ENST00000602619 APOBP04114 4563 aaKnown RBP0.74□□□□□ -2.29
SGMS1-207ENST00000602619 NBEAL1Q6ZS30 2694 aa0.74□□□□□ -2.29
SGMS1-207ENST00000602619 DYNC1H1Q14204 4646 aaKnown RBP0.74□□□□□ -2.29
SGMS1-207ENST00000602619 PKHD1P08F94 4074 aa0.74□□□□□ -2.29
SGMS1-207ENST00000602619 HSPG2P98160 4391 aa0.74□□□□□ -2.29
SGMS1-207ENST00000602619 PRLHP81277 87 aa0.74□□□□□ -2.29
SGMS1-207ENST00000602619 CSMD3Q7Z407 3707 aa0.74□□□□□ -2.29
SGMS1-207ENST00000602619 MAST4O15021 2626 aa0.74□□□□□ -2.29
SGMS1-207ENST00000602619 FLNBO75369 2602 aaKnown RBP0.74□□□□□ -2.29
SGMS1-207ENST00000602619 STARD9Q9P2P6 4700 aa0.73□□□□□ -2.29
SGMS1-207ENST00000602619 STAB2Q8WWQ8 2551 aa0.73□□□□□ -2.29
SGMS1-207ENST00000602619 FASNP49327 2511 aaKnown RBP0.73□□□□□ -2.29
SGMS1-207ENST00000602619 APLNQ9ULZ1 77 aa0.73□□□□□ -2.29
SGMS1-207ENST00000602619 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
SGMS1-207ENST00000602619 PKD1P98161 4303 aa0.73□□□□□ -2.29
SGMS1-207ENST00000602619 F8P00451 2351 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 TNXBP22105 4242 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 HECTD1Q9ULT8 2610 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 MGAM2Q2M2H8 2515 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 DNHD1Q96M86 4753 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 SMR3AQ99954 134 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 STAB1Q9NY15 2570 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 TENM2Q9NT68 2774 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 FAT3Q8TDW7 4589 aa0.72□□□□□ -2.29
SGMS1-207ENST00000602619 COL6A5A8TX70 2615 aa0.71□□□□□ -2.3
SGMS1-207ENST00000602619 FAT1Q14517 4588 aa0.71□□□□□ -2.3
SGMS1-207ENST00000602619 RPS29P62273 56 aaKnown RBP0.71□□□□□ -2.3
SGMS1-207ENST00000602619 MYCBP2O75592 4640 aa0.71□□□□□ -2.3
SGMS1-207ENST00000602619 TGP01266 2768 aa0.7□□□□□ -2.3
SGMS1-207ENST00000602619 SPINK1P00995 79 aa0.7□□□□□ -2.3
SGMS1-207ENST00000602619 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
SGMS1-207ENST00000602619 LRP1Q07954 4544 aaKnown RBP0.7□□□□□ -2.3
SGMS1-207ENST00000602619 MEGF8Q7Z7M0 2845 aa0.69□□□□□ -2.3
SGMS1-207ENST00000602619 H0YAA0 97 aa0.68□□□□□ -2.3
SGMS1-207ENST00000602619 H1FX-AS1Q4G0G2 97 aa0.68□□□□□ -2.3
SGMS1-207ENST00000602619 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms