RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 TYMSOSQ8TAI1 123 aa4.29□□□□□ -1.72
KDM1A-206ENST00000602503 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
KDM1A-206ENST00000602503 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
KDM1A-206ENST00000602503 Q8N1X5 172 aa4.27□□□□□ -1.73
KDM1A-206ENST00000602503 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
KDM1A-206ENST00000602503 DNAH17Q9UFH2 4485 aa4.26□□□□□ -1.73
KDM1A-206ENST00000602503 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
KDM1A-206ENST00000602503 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
KDM1A-206ENST00000602503 RYR2Q92736 4967 aa4.25□□□□□ -1.73
KDM1A-206ENST00000602503 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
KDM1A-206ENST00000602503 PKD1P98161 4303 aa4.23□□□□□ -1.73
KDM1A-206ENST00000602503 LRP1BQ9NZR2 4599 aa4.21□□□□□ -1.73
KDM1A-206ENST00000602503 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
KDM1A-206ENST00000602503 FAT1Q14517 4588 aa4.2□□□□□ -1.74
KDM1A-206ENST00000602503 KRTAP10-2P60368 255 aa4.2□□□□□ -1.74
KDM1A-206ENST00000602503 FLG2Q5D862 2391 aaPredicted RBP4.19□□□□□ -1.74
KDM1A-206ENST00000602503 DYNC1H1Q14204 4646 aaKnown RBP4.19□□□□□ -1.74
KDM1A-206ENST00000602503 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
KDM1A-206ENST00000602503 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
KDM1A-206ENST00000602503 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
KDM1A-206ENST00000602503 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
KDM1A-206ENST00000602503 VPS13BQ7Z7G8 4022 aa4.12□□□□□ -1.75
KDM1A-206ENST00000602503 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
KDM1A-206ENST00000602503 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
KDM1A-206ENST00000602503 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
KDM1A-206ENST00000602503 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
KDM1A-206ENST00000602503 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
KDM1A-206ENST00000602503 RPS29P62273 56 aaKnown RBP4.1□□□□□ -1.75
KDM1A-206ENST00000602503 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
KDM1A-206ENST00000602503 S4R3F8 94 aa4.08□□□□□ -1.76
KDM1A-206ENST00000602503 A0A0D9SG42 100 aa4.06□□□□□ -1.76
KDM1A-206ENST00000602503 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
KDM1A-206ENST00000602503 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
KDM1A-206ENST00000602503 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
KDM1A-206ENST00000602503 MYCBP2O75592 4640 aa4.05□□□□□ -1.76
KDM1A-206ENST00000602503 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
KDM1A-206ENST00000602503 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
KDM1A-206ENST00000602503 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
KDM1A-206ENST00000602503 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
KDM1A-206ENST00000602503 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
KDM1A-206ENST00000602503 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
KDM1A-206ENST00000602503 HSPG2P98160 4391 aa4□□□□□ -1.77
KDM1A-206ENST00000602503 KRTAP17-1Q9BYP8 105 aa3.99□□□□□ -1.77
KDM1A-206ENST00000602503 RYR1P21817 5038 aa3.98□□□□□ -1.77
KDM1A-206ENST00000602503 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
KDM1A-206ENST00000602503 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
KDM1A-206ENST00000602503 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
KDM1A-206ENST00000602503 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
KDM1A-206ENST00000602503 DMBT1Q9UGM3 2413 aaPredicted RBP3.93□□□□□ -1.78
KDM1A-206ENST00000602503 FAT3Q8TDW7 4589 aa3.93□□□□□ -1.78
KDM1A-206ENST00000602503 M0QZ58 72 aa3.93□□□□□ -1.78
KDM1A-206ENST00000602503 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
KDM1A-206ENST00000602503 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
KDM1A-206ENST00000602503 KRTAP4-5Q9BYR2 181 aa3.88□□□□□ -1.79
KDM1A-206ENST00000602503 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
KDM1A-206ENST00000602503 C9orf92A6NGG3 77 aa3.87□□□□□ -1.79
KDM1A-206ENST00000602503 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
KDM1A-206ENST00000602503 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
KDM1A-206ENST00000602503 HERC2O95714 4834 aa3.85□□□□□ -1.79
KDM1A-206ENST00000602503 KRTAP10-4P60372 401 aaPredicted RBP3.85□□□□□ -1.79
KDM1A-206ENST00000602503 Q5VSD8 79 aa3.85□□□□□ -1.79
KDM1A-206ENST00000602503 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.8
KDM1A-206ENST00000602503 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
KDM1A-206ENST00000602503 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
KDM1A-206ENST00000602503 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
KDM1A-206ENST00000602503 HERC1Q15751 4861 aa3.81□□□□□ -1.8
KDM1A-206ENST00000602503 TNXBP22105 4242 aa3.81□□□□□ -1.8
KDM1A-206ENST00000602503 LPAP08519 4548 aa3.81□□□□□ -1.8
KDM1A-206ENST00000602503 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
KDM1A-206ENST00000602503 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
KDM1A-206ENST00000602503 LRP2P98164 4655 aa3.75□□□□□ -1.81
KDM1A-206ENST00000602503 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
KDM1A-206ENST00000602503 INE1O15225 51 aa3.72□□□□□ -1.81
KDM1A-206ENST00000602503 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
KDM1A-206ENST00000602503 MUC2Q02817 5179 aa3.7□□□□□ -1.82
KDM1A-206ENST00000602503 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
KDM1A-206ENST00000602503 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
KDM1A-206ENST00000602503 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
KDM1A-206ENST00000602503 R4GN34 69 aa3.65□□□□□ -1.82
KDM1A-206ENST00000602503 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
KDM1A-206ENST00000602503 UBR4Q5T4S7 5183 aa3.62□□□□□ -1.83
KDM1A-206ENST00000602503 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
KDM1A-206ENST00000602503 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
KDM1A-206ENST00000602503 TNP1P09430 55 aa3.49□□□□□ -1.85
KDM1A-206ENST00000602503 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
KDM1A-206ENST00000602503 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
KDM1A-206ENST00000602503 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
KDM1A-206ENST00000602503 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
KDM1A-206ENST00000602503 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
KDM1A-206ENST00000602503 M0R2T5 61 aa3.16□□□□□ -1.9
KDM1A-206ENST00000602503 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
KDM1A-206ENST00000602503 USH2AO75445 5202 aa3.15□□□□□ -1.91
KDM1A-206ENST00000602503 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
KDM1A-206ENST00000602503 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
KDM1A-206ENST00000602503 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
KDM1A-206ENST00000602503 MT1HP80294 61 aa3.1□□□□□ -1.91
KDM1A-206ENST00000602503 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
KDM1A-206ENST00000602503 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
KDM1A-206ENST00000602503 KRTAP9-8Q9BYQ0 159 aa3.06□□□□□ -1.92
KDM1A-206ENST00000602503 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms