RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ACYP2P14621 99 aa9.86□□□□□ -0.83
PNKP-215ENST00000600910 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
PNKP-215ENST00000600910 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
PNKP-215ENST00000600910 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
PNKP-215ENST00000600910 CSAG1Q6PB30 78 aa9.78□□□□□ -0.84
PNKP-215ENST00000600910 TMEM258P61165 79 aa9.71□□□□□ -0.86
PNKP-215ENST00000600910 CHKB-CPT1BH3BT56 60 aa9.7□□□□□ -0.86
PNKP-215ENST00000600910 KRTAP9-8Q9BYQ0 159 aa9.7□□□□□ -0.86
PNKP-215ENST00000600910 COA5Q86WW8 74 aa9.67□□□□□ -0.86
PNKP-215ENST00000600910 ATP5EP56381 51 aaPredicted RBP9.65□□□□□ -0.86
PNKP-215ENST00000600910 MT2AP02795 61 aa9.64□□□□□ -0.87
PNKP-215ENST00000600910 SPTSSBQ8NFR3 76 aa9.6□□□□□ -0.87
PNKP-215ENST00000600910 MT1FP04733 61 aa9.56□□□□□ -0.88
PNKP-215ENST00000600910 KRTAP10-10P60014 251 aa9.54□□□□□ -0.88
PNKP-215ENST00000600910 H0YAA0 97 aa9.5□□□□□ -0.89
PNKP-215ENST00000600910 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
PNKP-215ENST00000600910 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.9
PNKP-215ENST00000600910 RPS28P62857 69 aaKnown RBP9.38□□□□□ -0.91
PNKP-215ENST00000600910 KRTAP9-3Q9BYQ3 159 aa9.37□□□□□ -0.91
PNKP-215ENST00000600910 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
PNKP-215ENST00000600910 P0C880 135 aa9.34□□□□□ -0.91
PNKP-215ENST00000600910 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
PNKP-215ENST00000600910 CRIPTQ9P021 101 aa9.27□□□□□ -0.93
PNKP-215ENST00000600910 SEC61GP60059 68 aa9.23□□□□□ -0.93
PNKP-215ENST00000600910 KRTAP9-2Q9BYQ4 174 aa9.23□□□□□ -0.93
PNKP-215ENST00000600910 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
PNKP-215ENST00000600910 LCE2BO14633 110 aa9.2□□□□□ -0.94
PNKP-215ENST00000600910 SPRR2GQ9BYE4 73 aa9.2□□□□□ -0.94
PNKP-215ENST00000600910 R4GN34 69 aa9.16□□□□□ -0.94
PNKP-215ENST00000600910 A0A1B0GU69 56 aa9.16□□□□□ -0.94
PNKP-215ENST00000600910 SMIM26A0A096LP01 95 aa9.15□□□□□ -0.94
PNKP-215ENST00000600910 M0QZ58 72 aa9.13□□□□□ -0.95
PNKP-215ENST00000600910 LINC01558Q9Y6Z2 57 aa9.13□□□□□ -0.95
PNKP-215ENST00000600910 PRR15LQ9BU68 103 aa9.05□□□□□ -0.96
PNKP-215ENST00000600910 USH2AO75445 5202 aa9.05□□□□□ -0.96
PNKP-215ENST00000600910 FSIP2Q5CZC0 6907 aa9.04□□□□□ -0.96
PNKP-215ENST00000600910 A0A1B0GU33 70 aa9.02□□□□□ -0.96
PNKP-215ENST00000600910 KRTAP19-8Q3LI54 63 aa9.02□□□□□ -0.96
PNKP-215ENST00000600910 Q1T7F1 81 aa8.99□□□□□ -0.97
PNKP-215ENST00000600910 KRTAP13-4Q3LI77 160 aa8.99□□□□□ -0.97
PNKP-215ENST00000600910 V9GYY9 64 aa8.99□□□□□ -0.97
PNKP-215ENST00000600910 LINC01554Q52M75 96 aa8.98□□□□□ -0.97
PNKP-215ENST00000600910 Q5VV11 94 aa8.98□□□□□ -0.97
PNKP-215ENST00000600910 MT1BP07438 61 aa8.95□□□□□ -0.98
PNKP-215ENST00000600910 SPATA8Q6RVD6 105 aa8.92□□□□□ -0.98
PNKP-215ENST00000600910 PSPHP1O15172 72 aa8.88□□□□□ -0.99
PNKP-215ENST00000600910 SSPOA2VEC9 5147 aa8.85□□□□□ -0.99
PNKP-215ENST00000600910 CRCT1Q9UGL9 99 aa8.83□□□□□ -1
PNKP-215ENST00000600910 A0A0D9SG42 100 aa8.8□□□□□ -1
PNKP-215ENST00000600910 PLAC4Q8WY50 150 aa8.79□□□□□ -1
PNKP-215ENST00000600910 UQCR11O14957 56 aa8.78□□□□□ -1
PNKP-215ENST00000600910 A6NN06 94 aa8.76□□□□□ -1.01
PNKP-215ENST00000600910 KRTAP19-6Q3LI70 58 aa8.74□□□□□ -1.01
PNKP-215ENST00000600910 SVIPQ8NHG7 77 aa8.72□□□□□ -1.01
PNKP-215ENST00000600910 A8MU10 97 aa8.72□□□□□ -1.01
PNKP-215ENST00000600910 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
PNKP-215ENST00000600910 MIR22HGQ0VDD5 57 aa8.65□□□□□ -1.03
PNKP-215ENST00000600910 KRTAP12-1P59990 96 aa8.62□□□□□ -1.03
PNKP-215ENST00000600910 SPINT4Q6UDR6 99 aa8.62□□□□□ -1.03
PNKP-215ENST00000600910 A6NED7 52 aa8.61□□□□□ -1.03
PNKP-215ENST00000600910 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
PNKP-215ENST00000600910 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
PNKP-215ENST00000600910 MT1XP80297 61 aa8.55□□□□□ -1.04
PNKP-215ENST00000600910 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
PNKP-215ENST00000600910 CAMK2N1Q7Z7J9 78 aa8.52□□□□□ -1.05
PNKP-215ENST00000600910 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
PNKP-215ENST00000600910 BRK1Q8WUW1 75 aa8.5□□□□□ -1.05
PNKP-215ENST00000600910 CDC42SE1Q9NRR8 79 aa8.4□□□□□ -1.06
PNKP-215ENST00000600910 K7ERS5 55 aa8.34□□□□□ -1.07
PNKP-215ENST00000600910 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
PNKP-215ENST00000600910 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
PNKP-215ENST00000600910 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
PNKP-215ENST00000600910 KRTAP10-7P60409 375 aaPredicted RBP8.19□□□□□ -1.1
PNKP-215ENST00000600910 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
PNKP-215ENST00000600910 KRTAP10-12P60413 245 aa8.12□□□□□ -1.11
PNKP-215ENST00000600910 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
PNKP-215ENST00000600910 KMT2DO14686 5537 aa8.04□□□□□ -1.12
PNKP-215ENST00000600910 TNP1P09430 55 aa8.03□□□□□ -1.12
PNKP-215ENST00000600910 PMAIP1Q13794 54 aa8□□□□□ -1.13
PNKP-215ENST00000600910 KRTAP4-8A0A0G2JLE6 195 aa8□□□□□ -1.13
PNKP-215ENST00000600910 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
PNKP-215ENST00000600910 ROMO1P60602 79 aa7.92□□□□□ -1.14
PNKP-215ENST00000600910 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
PNKP-215ENST00000600910 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.14
PNKP-215ENST00000600910 KRTAP25-1Q3LHN0 102 aa7.89□□□□□ -1.15
PNKP-215ENST00000600910 KRTAP6-3Q3LI67 103 aa7.86□□□□□ -1.15
PNKP-215ENST00000600910 KRTAP5-9P26371 169 aa7.78□□□□□ -1.16
PNKP-215ENST00000600910 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
PNKP-215ENST00000600910 SPRR2FQ96RM1 72 aa7.73□□□□□ -1.17
PNKP-215ENST00000600910 KTN1-AS1Q86SY8 53 aa7.72□□□□□ -1.17
PNKP-215ENST00000600910 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
PNKP-215ENST00000600910 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
PNKP-215ENST00000600910 MUC12Q9UKN1 5478 aa7.62□□□□□ -1.19
PNKP-215ENST00000600910 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
PNKP-215ENST00000600910 PRAC1Q96KF2 57 aa7.55□□□□□ -1.2
PNKP-215ENST00000600910 MT1EP04732 61 aa7.53□□□□□ -1.2
PNKP-215ENST00000600910 MDN1Q9NU22 5596 aa7.51□□□□□ -1.21
PNKP-215ENST00000600910 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
PNKP-215ENST00000600910 KRTAP12-3P60328 96 aa7.48□□□□□ -1.21
PNKP-215ENST00000600910 SPRR2EP22531 72 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms