RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
SYMPK-214ENST00000599814 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
SYMPK-214ENST00000599814 HUWE1Q7Z6Z7 4374 aaKnown RBP5.58□□□□□ -1.52
SYMPK-214ENST00000599814 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
SYMPK-214ENST00000599814 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
SYMPK-214ENST00000599814 MEGF8Q7Z7M0 2845 aa5.49□□□□□ -1.53
SYMPK-214ENST00000599814 MT1HP80294 61 aa5.49□□□□□ -1.53
SYMPK-214ENST00000599814 SPRR2EP22531 72 aa5.42□□□□□ -1.54
SYMPK-214ENST00000599814 SPRR2BP35325 72 aa5.42□□□□□ -1.54
SYMPK-214ENST00000599814 SPRR2AP35326 72 aa5.42□□□□□ -1.54
SYMPK-214ENST00000599814 KRTAP17-1Q9BYP8 105 aa5.38□□□□□ -1.55
SYMPK-214ENST00000599814 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
SYMPK-214ENST00000599814 DNAH1Q9P2D7 4330 aa5.37□□□□□ -1.55
SYMPK-214ENST00000599814 CSMD3Q7Z407 3707 aa5.32□□□□□ -1.56
SYMPK-214ENST00000599814 DNAH9Q9NYC9 4486 aa5.28□□□□□ -1.56
SYMPK-214ENST00000599814 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
SYMPK-214ENST00000599814 SPRR2DP22532 72 aa5.25□□□□□ -1.57
SYMPK-214ENST00000599814 MT2AP02795 61 aa5.24□□□□□ -1.57
SYMPK-214ENST00000599814 DNHD1Q96M86 4753 aa5.22□□□□□ -1.57
SYMPK-214ENST00000599814 ANK2Q01484 3957 aa5.16□□□□□ -1.58
SYMPK-214ENST00000599814 MT1FP04733 61 aa5.11□□□□□ -1.59
SYMPK-214ENST00000599814 DNAH5Q8TE73 4624 aa5.08□□□□□ -1.6
SYMPK-214ENST00000599814 PLECQ15149 4684 aaKnown RBP5.07□□□□□ -1.6
SYMPK-214ENST00000599814 LCE2BO14633 110 aa5.06□□□□□ -1.6
SYMPK-214ENST00000599814 PRKDCP78527 4128 aaKnown RBP5.06□□□□□ -1.6
SYMPK-214ENST00000599814 DNAH10Q8IVF4 4471 aa5.06□□□□□ -1.6
SYMPK-214ENST00000599814 CMYA5Q8N3K9 4069 aa5.04□□□□□ -1.6
SYMPK-214ENST00000599814 DNAH11Q96DT5 4516 aa5.04□□□□□ -1.6
SYMPK-214ENST00000599814 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
SYMPK-214ENST00000599814 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
SYMPK-214ENST00000599814 DNAH2Q9P225 4427 aa5□□□□□ -1.61
SYMPK-214ENST00000599814 STARD9Q9P2P6 4700 aa5□□□□□ -1.61
SYMPK-214ENST00000599814 LYSTQ99698 3801 aa4.98□□□□□ -1.61
SYMPK-214ENST00000599814 DNAH3Q8TD57 4116 aa4.97□□□□□ -1.61
SYMPK-214ENST00000599814 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.62
SYMPK-214ENST00000599814 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
SYMPK-214ENST00000599814 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
SYMPK-214ENST00000599814 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
SYMPK-214ENST00000599814 KMT2AQ03164 3969 aa4.94□□□□□ -1.62
SYMPK-214ENST00000599814 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
SYMPK-214ENST00000599814 DNAH17Q9UFH2 4485 aa4.9□□□□□ -1.62
SYMPK-214ENST00000599814 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.63
SYMPK-214ENST00000599814 SPRR2GQ9BYE4 73 aa4.89□□□□□ -1.63
SYMPK-214ENST00000599814 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
SYMPK-214ENST00000599814 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
SYMPK-214ENST00000599814 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
SYMPK-214ENST00000599814 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
SYMPK-214ENST00000599814 RYR1P21817 5038 aa4.84□□□□□ -1.63
SYMPK-214ENST00000599814 LCE2CQ5TA81 110 aa4.84□□□□□ -1.64
SYMPK-214ENST00000599814 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
SYMPK-214ENST00000599814 FAT1Q14517 4588 aa4.81□□□□□ -1.64
SYMPK-214ENST00000599814 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
SYMPK-214ENST00000599814 DNAH8Q96JB1 4490 aa4.79□□□□□ -1.64
SYMPK-214ENST00000599814 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
SYMPK-214ENST00000599814 FRAS1Q86XX4 4008 aa4.76□□□□□ -1.65
SYMPK-214ENST00000599814 VPS13BQ7Z7G8 4022 aa4.74□□□□□ -1.65
SYMPK-214ENST00000599814 DYNC2H1Q8NCM8 4307 aaKnown RBP4.73□□□□□ -1.65
SYMPK-214ENST00000599814 SACSQ9NZJ4 4579 aa4.73□□□□□ -1.65
SYMPK-214ENST00000599814 DNAH6Q9C0G6 4158 aa4.71□□□□□ -1.66
SYMPK-214ENST00000599814 MT4P47944 62 aa4.71□□□□□ -1.66
SYMPK-214ENST00000599814 HECTD4Q9Y4D8 3996 aa4.68□□□□□ -1.66
SYMPK-214ENST00000599814 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
SYMPK-214ENST00000599814 MT1GP13640 62 aa4.66□□□□□ -1.66
SYMPK-214ENST00000599814 HYDINQ4G0P3 5121 aa4.65□□□□□ -1.67
SYMPK-214ENST00000599814 RYR3Q15413 4870 aa4.62□□□□□ -1.67
SYMPK-214ENST00000599814 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
SYMPK-214ENST00000599814 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
SYMPK-214ENST00000599814 PKHD1P08F94 4074 aa4.59□□□□□ -1.67
SYMPK-214ENST00000599814 FAT3Q8TDW7 4589 aa4.57□□□□□ -1.68
SYMPK-214ENST00000599814 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
SYMPK-214ENST00000599814 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
SYMPK-214ENST00000599814 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
SYMPK-214ENST00000599814 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
SYMPK-214ENST00000599814 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
SYMPK-214ENST00000599814 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
SYMPK-214ENST00000599814 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
SYMPK-214ENST00000599814 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
SYMPK-214ENST00000599814 LRP1Q07954 4544 aaKnown RBP4.48□□□□□ -1.69
SYMPK-214ENST00000599814 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.69
SYMPK-214ENST00000599814 RYR2Q92736 4967 aa4.46□□□□□ -1.7
SYMPK-214ENST00000599814 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
SYMPK-214ENST00000599814 PKD1P98161 4303 aa4.45□□□□□ -1.7
SYMPK-214ENST00000599814 HSPG2P98160 4391 aa4.44□□□□□ -1.7
SYMPK-214ENST00000599814 MT1XP80297 61 aa4.42□□□□□ -1.7
SYMPK-214ENST00000599814 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
SYMPK-214ENST00000599814 MT1BP07438 61 aa4.41□□□□□ -1.7
SYMPK-214ENST00000599814 HERC2O95714 4834 aa4.4□□□□□ -1.7
SYMPK-214ENST00000599814 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
SYMPK-214ENST00000599814 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
SYMPK-214ENST00000599814 HERC1Q15751 4861 aa4.34□□□□□ -1.71
SYMPK-214ENST00000599814 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
SYMPK-214ENST00000599814 LPAP08519 4548 aa4.28□□□□□ -1.72
SYMPK-214ENST00000599814 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
SYMPK-214ENST00000599814 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
SYMPK-214ENST00000599814 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
SYMPK-214ENST00000599814 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
SYMPK-214ENST00000599814 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
SYMPK-214ENST00000599814 PCLOQ9Y6V0 5065 aa4.22□□□□□ -1.73
SYMPK-214ENST00000599814 EPPK1P58107 5090 aaKnown RBP4.22□□□□□ -1.73
SYMPK-214ENST00000599814 LRP2P98164 4655 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms