RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
KHSRP-211ENST00000599642 ATP5EP56381 51 aaPredicted RBP8.99□□□□□ -0.97
KHSRP-211ENST00000599642 CSAG1Q6PB30 78 aa8.98□□□□□ -0.97
KHSRP-211ENST00000599642 TMEM258P61165 79 aa8.93□□□□□ -0.98
KHSRP-211ENST00000599642 KRTAP3-3Q9BYR6 98 aa8.93□□□□□ -0.98
KHSRP-211ENST00000599642 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
KHSRP-211ENST00000599642 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
KHSRP-211ENST00000599642 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
KHSRP-211ENST00000599642 PCP4P48539 62 aa8.88□□□□□ -0.99
KHSRP-211ENST00000599642 CHKB-CPT1BH3BT56 60 aa8.86□□□□□ -0.99
KHSRP-211ENST00000599642 H0YAA0 97 aa8.82□□□□□ -1
KHSRP-211ENST00000599642 COA5Q86WW8 74 aa8.81□□□□□ -1
KHSRP-211ENST00000599642 KRTAP9-8Q9BYQ0 159 aa8.79□□□□□ -1
KHSRP-211ENST00000599642 MT2AP02795 61 aa8.7□□□□□ -1.02
KHSRP-211ENST00000599642 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
KHSRP-211ENST00000599642 MT1FP04733 61 aa8.62□□□□□ -1.03
KHSRP-211ENST00000599642 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
KHSRP-211ENST00000599642 CRIPTQ9P021 101 aa8.61□□□□□ -1.03
KHSRP-211ENST00000599642 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
KHSRP-211ENST00000599642 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
KHSRP-211ENST00000599642 SEC61GP60059 68 aa8.52□□□□□ -1.05
KHSRP-211ENST00000599642 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
KHSRP-211ENST00000599642 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
KHSRP-211ENST00000599642 RPS28P62857 69 aaKnown RBP8.48□□□□□ -1.05
KHSRP-211ENST00000599642 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
KHSRP-211ENST00000599642 P0C880 135 aa8.42□□□□□ -1.06
KHSRP-211ENST00000599642 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
KHSRP-211ENST00000599642 A0A1B0GU69 56 aa8.39□□□□□ -1.07
KHSRP-211ENST00000599642 PRR15LQ9BU68 103 aa8.39□□□□□ -1.07
KHSRP-211ENST00000599642 V9GYY9 64 aa8.39□□□□□ -1.07
KHSRP-211ENST00000599642 M0QZ58 72 aa8.37□□□□□ -1.07
KHSRP-211ENST00000599642 R4GN34 69 aa8.37□□□□□ -1.07
KHSRP-211ENST00000599642 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
KHSRP-211ENST00000599642 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
KHSRP-211ENST00000599642 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
KHSRP-211ENST00000599642 Q1T7F1 81 aa8.3□□□□□ -1.08
KHSRP-211ENST00000599642 Q5VV11 94 aa8.28□□□□□ -1.08
KHSRP-211ENST00000599642 LCE2BO14633 110 aa8.27□□□□□ -1.09
KHSRP-211ENST00000599642 A0A1B0GU33 70 aa8.26□□□□□ -1.09
KHSRP-211ENST00000599642 KRTAP19-8Q3LI54 63 aa8.26□□□□□ -1.09
KHSRP-211ENST00000599642 A6NN06 94 aa8.15□□□□□ -1.1
KHSRP-211ENST00000599642 UQCR11O14957 56 aa8.1□□□□□ -1.11
KHSRP-211ENST00000599642 MT1BP07438 61 aa8.1□□□□□ -1.11
KHSRP-211ENST00000599642 KRTAP13-4Q3LI77 160 aa8.09□□□□□ -1.11
KHSRP-211ENST00000599642 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
KHSRP-211ENST00000599642 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
KHSRP-211ENST00000599642 PSPHP1O15172 72 aa8.03□□□□□ -1.12
KHSRP-211ENST00000599642 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
KHSRP-211ENST00000599642 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
KHSRP-211ENST00000599642 KRTAP19-6Q3LI70 58 aa7.99□□□□□ -1.13
KHSRP-211ENST00000599642 USH2AO75445 5202 aa7.95□□□□□ -1.14
KHSRP-211ENST00000599642 MIR22HGQ0VDD5 57 aa7.92□□□□□ -1.14
KHSRP-211ENST00000599642 A0A0D9SG42 100 aa7.89□□□□□ -1.15
KHSRP-211ENST00000599642 PRO2289Q9P1D8 64 aa7.87□□□□□ -1.15
KHSRP-211ENST00000599642 KRTAP9-6A0A140TA67 174 aa7.86□□□□□ -1.15
KHSRP-211ENST00000599642 A6NED7 52 aa7.86□□□□□ -1.15
KHSRP-211ENST00000599642 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
KHSRP-211ENST00000599642 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
KHSRP-211ENST00000599642 A8MU10 97 aa7.82□□□□□ -1.16
KHSRP-211ENST00000599642 FSIP2Q5CZC0 6907 aa7.8□□□□□ -1.16
KHSRP-211ENST00000599642 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
KHSRP-211ENST00000599642 SSPOA2VEC9 5147 aa7.78□□□□□ -1.16
KHSRP-211ENST00000599642 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
KHSRP-211ENST00000599642 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
KHSRP-211ENST00000599642 K7ERS5 55 aa7.74□□□□□ -1.17
KHSRP-211ENST00000599642 MT1XP80297 61 aa7.74□□□□□ -1.17
KHSRP-211ENST00000599642 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
KHSRP-211ENST00000599642 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
KHSRP-211ENST00000599642 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
KHSRP-211ENST00000599642 BRK1Q8WUW1 75 aa7.42□□□□□ -1.22
KHSRP-211ENST00000599642 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
KHSRP-211ENST00000599642 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
KHSRP-211ENST00000599642 TNP1P09430 55 aa7.38□□□□□ -1.23
KHSRP-211ENST00000599642 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
KHSRP-211ENST00000599642 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
KHSRP-211ENST00000599642 ROMO1P60602 79 aa7.26□□□□□ -1.25
KHSRP-211ENST00000599642 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
KHSRP-211ENST00000599642 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
KHSRP-211ENST00000599642 KRTAP8-1Q8IUC2 63 aa7.18□□□□□ -1.26
KHSRP-211ENST00000599642 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
KHSRP-211ENST00000599642 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
KHSRP-211ENST00000599642 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
KHSRP-211ENST00000599642 KRTAP5-9P26371 169 aa7.14□□□□□ -1.27
KHSRP-211ENST00000599642 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
KHSRP-211ENST00000599642 PRO0628Q9UI54 55 aa7.13□□□□□ -1.27
KHSRP-211ENST00000599642 PMAIP1Q13794 54 aa7.06□□□□□ -1.28
KHSRP-211ENST00000599642 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
KHSRP-211ENST00000599642 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
KHSRP-211ENST00000599642 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
KHSRP-211ENST00000599642 KMT2DO14686 5537 aa6.97□□□□□ -1.29
KHSRP-211ENST00000599642 KRTAP19-7Q3SYF9 63 aa6.92□□□□□ -1.3
KHSRP-211ENST00000599642 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
KHSRP-211ENST00000599642 KRTAP19-5Q3LI72 72 aa6.86□□□□□ -1.31
KHSRP-211ENST00000599642 MT1EP04732 61 aa6.83□□□□□ -1.32
KHSRP-211ENST00000599642 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
KHSRP-211ENST00000599642 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
KHSRP-211ENST00000599642 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
KHSRP-211ENST00000599642 SPRR2EP22531 72 aa6.72□□□□□ -1.33
KHSRP-211ENST00000599642 SPRR2BP35325 72 aa6.72□□□□□ -1.33
KHSRP-211ENST00000599642 SPRR2AP35326 72 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms