RNA–Protein interactions for RNA: ENST00000599316.1

AC243960.3-201, humanhuman

TSL 4 BASIC

Gene AC243960.3, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243960.3-201ENST00000599316 CYP4F30PQ9H0H9 118 aa4.51□□□□□ -1.69
AC243960.3-201ENST00000599316 RPS29P62273 56 aaKnown RBP4.5□□□□□ -1.69
AC243960.3-201ENST00000599316 PCOTHQ58A44 107 aa4.49□□□□□ -1.69
AC243960.3-201ENST00000599316 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
AC243960.3-201ENST00000599316 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
AC243960.3-201ENST00000599316 V9GYY9 64 aa4.45□□□□□ -1.7
AC243960.3-201ENST00000599316 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
AC243960.3-201ENST00000599316 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
AC243960.3-201ENST00000599316 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
AC243960.3-201ENST00000599316 FP248Q71RG6 208 aaPredicted RBP4.43□□□□□ -1.7
AC243960.3-201ENST00000599316 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
AC243960.3-201ENST00000599316 Q5W150 140 aa4.41□□□□□ -1.7
AC243960.3-201ENST00000599316 ACYP2P14621 99 aa4.4□□□□□ -1.71
AC243960.3-201ENST00000599316 COA5Q86WW8 74 aa4.4□□□□□ -1.71
AC243960.3-201ENST00000599316 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
AC243960.3-201ENST00000599316 Q1T7F1 81 aa4.39□□□□□ -1.71
AC243960.3-201ENST00000599316 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
AC243960.3-201ENST00000599316 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
AC243960.3-201ENST00000599316 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
AC243960.3-201ENST00000599316 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
AC243960.3-201ENST00000599316 KRTAP13-3Q3SY46 172 aa4.37□□□□□ -1.71
AC243960.3-201ENST00000599316 HRES1P13985 223 aa4.36□□□□□ -1.71
AC243960.3-201ENST00000599316 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
AC243960.3-201ENST00000599316 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
AC243960.3-201ENST00000599316 MUC17Q685J3 4493 aa4.34□□□□□ -1.71
AC243960.3-201ENST00000599316 C7orf65Q6ZTY9 151 aa4.34□□□□□ -1.71
AC243960.3-201ENST00000599316 PSPHP1O15172 72 aa4.32□□□□□ -1.72
AC243960.3-201ENST00000599316 DMAC1Q96GE9 116 aa4.31□□□□□ -1.72
AC243960.3-201ENST00000599316 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
AC243960.3-201ENST00000599316 A8MUU9 505 aa4.3□□□□□ -1.72
AC243960.3-201ENST00000599316 M0R2T5 61 aa4.3□□□□□ -1.72
AC243960.3-201ENST00000599316 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
AC243960.3-201ENST00000599316 C20orf166-AS1Q96NR2 134 aa4.3□□□□□ -1.72
AC243960.3-201ENST00000599316 MT1HP80294 61 aa4.29□□□□□ -1.72
AC243960.3-201ENST00000599316 A8MUN3 132 aa4.28□□□□□ -1.72
AC243960.3-201ENST00000599316 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
AC243960.3-201ENST00000599316 SPTSSBQ8NFR3 76 aa4.28□□□□□ -1.72
AC243960.3-201ENST00000599316 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
AC243960.3-201ENST00000599316 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
AC243960.3-201ENST00000599316 LINC01558Q9Y6Z2 57 aa4.27□□□□□ -1.73
AC243960.3-201ENST00000599316 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
AC243960.3-201ENST00000599316 Q75L30 129 aa4.26□□□□□ -1.73
AC243960.3-201ENST00000599316 A6NED7 52 aa4.24□□□□□ -1.73
AC243960.3-201ENST00000599316 SPINK7P58062 85 aa4.23□□□□□ -1.73
AC243960.3-201ENST00000599316 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
AC243960.3-201ENST00000599316 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
AC243960.3-201ENST00000599316 SEC61GP60059 68 aa4.22□□□□□ -1.73
AC243960.3-201ENST00000599316 Q5VV11 94 aa4.22□□□□□ -1.73
AC243960.3-201ENST00000599316 A0A1B0GU69 56 aa4.21□□□□□ -1.74
AC243960.3-201ENST00000599316 RPL37P61927 97 aaKnown RBP4.18□□□□□ -1.74
AC243960.3-201ENST00000599316 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
AC243960.3-201ENST00000599316 UQCR11O14957 56 aa4.11□□□□□ -1.75
AC243960.3-201ENST00000599316 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
AC243960.3-201ENST00000599316 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
AC243960.3-201ENST00000599316 LCA10Q71F78 164 aa4.08□□□□□ -1.76
AC243960.3-201ENST00000599316 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
AC243960.3-201ENST00000599316 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
AC243960.3-201ENST00000599316 S4R3F8 94 aa4.05□□□□□ -1.76
AC243960.3-201ENST00000599316 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
AC243960.3-201ENST00000599316 A0A1B0GU33 70 aa4.02□□□□□ -1.77
AC243960.3-201ENST00000599316 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
AC243960.3-201ENST00000599316 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
AC243960.3-201ENST00000599316 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
AC243960.3-201ENST00000599316 A8MU10 97 aa4□□□□□ -1.77
AC243960.3-201ENST00000599316 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
AC243960.3-201ENST00000599316 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
AC243960.3-201ENST00000599316 USH2AO75445 5202 aa3.98□□□□□ -1.77
AC243960.3-201ENST00000599316 K7ERS5 55 aa3.97□□□□□ -1.77
AC243960.3-201ENST00000599316 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
AC243960.3-201ENST00000599316 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
AC243960.3-201ENST00000599316 CSAG1Q6PB30 78 aa3.95□□□□□ -1.78
AC243960.3-201ENST00000599316 A6NN06 94 aa3.94□□□□□ -1.78
AC243960.3-201ENST00000599316 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
AC243960.3-201ENST00000599316 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
AC243960.3-201ENST00000599316 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
AC243960.3-201ENST00000599316 MT2AP02795 61 aa3.92□□□□□ -1.78
AC243960.3-201ENST00000599316 H0YAA0 97 aa3.88□□□□□ -1.79
AC243960.3-201ENST00000599316 MT1FP04733 61 aa3.88□□□□□ -1.79
AC243960.3-201ENST00000599316 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
AC243960.3-201ENST00000599316 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
AC243960.3-201ENST00000599316 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
AC243960.3-201ENST00000599316 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
AC243960.3-201ENST00000599316 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
AC243960.3-201ENST00000599316 A0A0D9SG42 100 aa3.81□□□□□ -1.8
AC243960.3-201ENST00000599316 M0QZ58 72 aa3.81□□□□□ -1.8
AC243960.3-201ENST00000599316 P0C880 135 aa3.8□□□□□ -1.8
AC243960.3-201ENST00000599316 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
AC243960.3-201ENST00000599316 R4GN34 69 aa3.75□□□□□ -1.81
AC243960.3-201ENST00000599316 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
AC243960.3-201ENST00000599316 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
AC243960.3-201ENST00000599316 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
AC243960.3-201ENST00000599316 ROMO1P60602 79 aa3.73□□□□□ -1.81
AC243960.3-201ENST00000599316 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
AC243960.3-201ENST00000599316 LINC01554Q52M75 96 aa3.7□□□□□ -1.82
AC243960.3-201ENST00000599316 KRTAP12-1P59990 96 aa3.65□□□□□ -1.83
AC243960.3-201ENST00000599316 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
AC243960.3-201ENST00000599316 CRIPTQ9P021 101 aa3.65□□□□□ -1.83
AC243960.3-201ENST00000599316 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
AC243960.3-201ENST00000599316 NEBP20929 6669 aa3.61□□□□□ -1.83
AC243960.3-201ENST00000599316 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms