RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 KMT2CQ8NEZ4 4911 aaKnown RBP8.28□□□□□ -1.08
TRPM4-209ENST00000598502 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
TRPM4-209ENST00000598502 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
TRPM4-209ENST00000598502 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
TRPM4-209ENST00000598502 LRP1Q07954 4544 aaKnown RBP8.2□□□□□ -1.1
TRPM4-209ENST00000598502 TPRXLQ17RH7 258 aa8.19□□□□□ -1.1
TRPM4-209ENST00000598502 RYR2Q92736 4967 aa8.17□□□□□ -1.1
TRPM4-209ENST00000598502 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.1
TRPM4-209ENST00000598502 Q5VSD8 79 aa8.14□□□□□ -1.11
TRPM4-209ENST00000598502 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
TRPM4-209ENST00000598502 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
TRPM4-209ENST00000598502 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
TRPM4-209ENST00000598502 S4R3F8 94 aa8□□□□□ -1.13
TRPM4-209ENST00000598502 KIAA1109Q2LD37 5005 aa7.98□□□□□ -1.13
TRPM4-209ENST00000598502 KRTAP10-6P60371 365 aaPredicted RBP7.97□□□□□ -1.13
TRPM4-209ENST00000598502 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
TRPM4-209ENST00000598502 KRTAP17-1Q9BYP8 105 aa7.95□□□□□ -1.14
TRPM4-209ENST00000598502 RYR3Q15413 4870 aa7.95□□□□□ -1.14
TRPM4-209ENST00000598502 HSPG2P98160 4391 aa7.94□□□□□ -1.14
TRPM4-209ENST00000598502 FAT3Q8TDW7 4589 aa7.93□□□□□ -1.14
TRPM4-209ENST00000598502 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
TRPM4-209ENST00000598502 KRTAP15-1Q3LI76 137 aa7.91□□□□□ -1.14
TRPM4-209ENST00000598502 XP32Q5T750 250 aa7.89□□□□□ -1.15
TRPM4-209ENST00000598502 TNXBP22105 4242 aa7.88□□□□□ -1.15
TRPM4-209ENST00000598502 RYR1P21817 5038 aa7.86□□□□□ -1.15
TRPM4-209ENST00000598502 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
TRPM4-209ENST00000598502 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
TRPM4-209ENST00000598502 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
TRPM4-209ENST00000598502 MT1HL1P0DM35 61 aa7.77□□□□□ -1.16
TRPM4-209ENST00000598502 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
TRPM4-209ENST00000598502 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
TRPM4-209ENST00000598502 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
TRPM4-209ENST00000598502 LRP2P98164 4655 aa7.71□□□□□ -1.18
TRPM4-209ENST00000598502 M0QZ58 72 aa7.68□□□□□ -1.18
TRPM4-209ENST00000598502 KRTAP4-5Q9BYR2 181 aa7.67□□□□□ -1.18
TRPM4-209ENST00000598502 LPAP08519 4548 aa7.66□□□□□ -1.18
TRPM4-209ENST00000598502 R4GN34 69 aa7.62□□□□□ -1.19
TRPM4-209ENST00000598502 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
TRPM4-209ENST00000598502 ABCA13Q86UQ4 5058 aa7.57□□□□□ -1.2
TRPM4-209ENST00000598502 J3QL48 77 aa7.52□□□□□ -1.21
TRPM4-209ENST00000598502 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
TRPM4-209ENST00000598502 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
TRPM4-209ENST00000598502 HERC2O95714 4834 aa7.34□□□□□ -1.23
TRPM4-209ENST00000598502 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
TRPM4-209ENST00000598502 MUC2Q02817 5179 aa7.24□□□□□ -1.25
TRPM4-209ENST00000598502 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.26
TRPM4-209ENST00000598502 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
TRPM4-209ENST00000598502 PP632Q6XCG6 107 aa7.09□□□□□ -1.27
TRPM4-209ENST00000598502 HERC1Q15751 4861 aa7.06□□□□□ -1.28
TRPM4-209ENST00000598502 BIRC6Q9NR09 4857 aa6.99□□□□□ -1.29
TRPM4-209ENST00000598502 TNP1P09430 55 aa6.98□□□□□ -1.29
TRPM4-209ENST00000598502 KRTAP19-2Q3LHN2 52 aa6.94□□□□□ -1.3
TRPM4-209ENST00000598502 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
TRPM4-209ENST00000598502 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
TRPM4-209ENST00000598502 M0R2T5 61 aa6.84□□□□□ -1.31
TRPM4-209ENST00000598502 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
TRPM4-209ENST00000598502 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
TRPM4-209ENST00000598502 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
TRPM4-209ENST00000598502 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.34
TRPM4-209ENST00000598502 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
TRPM4-209ENST00000598502 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
TRPM4-209ENST00000598502 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
TRPM4-209ENST00000598502 MT1HP80294 61 aa6.52□□□□□ -1.37
TRPM4-209ENST00000598502 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
TRPM4-209ENST00000598502 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
TRPM4-209ENST00000598502 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.37
TRPM4-209ENST00000598502 MT1FP04733 61 aa6.44□□□□□ -1.38
TRPM4-209ENST00000598502 MT2AP02795 61 aa6.41□□□□□ -1.38
TRPM4-209ENST00000598502 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
TRPM4-209ENST00000598502 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
TRPM4-209ENST00000598502 INE1O15225 51 aa6.33□□□□□ -1.4
TRPM4-209ENST00000598502 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
TRPM4-209ENST00000598502 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
TRPM4-209ENST00000598502 MT1BP07438 61 aa6.14□□□□□ -1.43
TRPM4-209ENST00000598502 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
TRPM4-209ENST00000598502 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
TRPM4-209ENST00000598502 MT1XP80297 61 aa6.07□□□□□ -1.44
TRPM4-209ENST00000598502 USH2AO75445 5202 aa6.06□□□□□ -1.44
TRPM4-209ENST00000598502 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
TRPM4-209ENST00000598502 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
TRPM4-209ENST00000598502 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
TRPM4-209ENST00000598502 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
TRPM4-209ENST00000598502 LCE2BO14633 110 aa5.9□□□□□ -1.47
TRPM4-209ENST00000598502 KMT2DO14686 5537 aa5.9□□□□□ -1.47
TRPM4-209ENST00000598502 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
TRPM4-209ENST00000598502 LCE2AQ5TA79 106 aaPredicted RBP5.73□□□□□ -1.49
TRPM4-209ENST00000598502 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
TRPM4-209ENST00000598502 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
TRPM4-209ENST00000598502 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
TRPM4-209ENST00000598502 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
TRPM4-209ENST00000598502 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
TRPM4-209ENST00000598502 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
TRPM4-209ENST00000598502 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
TRPM4-209ENST00000598502 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.54
TRPM4-209ENST00000598502 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
TRPM4-209ENST00000598502 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
TRPM4-209ENST00000598502 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
TRPM4-209ENST00000598502 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
TRPM4-209ENST00000598502 MT1EP04732 61 aa5.26□□□□□ -1.57
TRPM4-209ENST00000598502 MT1LQ93083 61 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms