RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, humanhuman

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-208ENST00000592052 TMEM258P61165 79 aa11.91□□□□□ -0.5
TMEM259-208ENST00000592052 LCA10Q71F78 164 aa11.91□□□□□ -0.5
TMEM259-208ENST00000592052 KRTAP9-8Q9BYQ0 159 aa11.87□□□□□ -0.51
TMEM259-208ENST00000592052 DMAC1Q96GE9 116 aa11.86□□□□□ -0.51
TMEM259-208ENST00000592052 CSAG1Q6PB30 78 aa11.82□□□□□ -0.52
TMEM259-208ENST00000592052 SPANXA2-OT1Q8N9U9 137 aa11.78□□□□□ -0.52
TMEM259-208ENST00000592052 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
TMEM259-208ENST00000592052 MT2AP02795 61 aa11.77□□□□□ -0.53
TMEM259-208ENST00000592052 ATP5EP56381 51 aaPredicted RBP11.75□□□□□ -0.53
TMEM259-208ENST00000592052 ACYP2P14621 99 aa11.71□□□□□ -0.54
TMEM259-208ENST00000592052 KRTAP10-10P60014 251 aa11.68□□□□□ -0.54
TMEM259-208ENST00000592052 MT1FP04733 61 aa11.68□□□□□ -0.54
TMEM259-208ENST00000592052 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
TMEM259-208ENST00000592052 KRTAP9-2Q9BYQ4 174 aa11.6□□□□□ -0.55
TMEM259-208ENST00000592052 SERP1Q9Y6X1 66 aa11.54□□□□□ -0.56
TMEM259-208ENST00000592052 CHKB-CPT1BH3BT56 60 aa11.51□□□□□ -0.57
TMEM259-208ENST00000592052 RPS28P62857 69 aaKnown RBP11.48□□□□□ -0.57
TMEM259-208ENST00000592052 KRTAP9-3Q9BYQ3 159 aa11.48□□□□□ -0.57
TMEM259-208ENST00000592052 H0YAA0 97 aa11.46□□□□□ -0.58
TMEM259-208ENST00000592052 SPTSSBQ8NFR3 76 aa11.46□□□□□ -0.58
TMEM259-208ENST00000592052 COA5Q86WW8 74 aa11.43□□□□□ -0.58
TMEM259-208ENST00000592052 ADM2Q7Z4H4 148 aa11.35□□□□□ -0.59
TMEM259-208ENST00000592052 LCE2BO14633 110 aa11.27□□□□□ -0.6
TMEM259-208ENST00000592052 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
TMEM259-208ENST00000592052 SMIM26A0A096LP01 95 aa11.23□□□□□ -0.61
TMEM259-208ENST00000592052 KRTAP19-1Q8IUB9 90 aa11.19□□□□□ -0.62
TMEM259-208ENST00000592052 P0C880 135 aa11.17□□□□□ -0.62
TMEM259-208ENST00000592052 SPRR2GQ9BYE4 73 aa11.17□□□□□ -0.62
TMEM259-208ENST00000592052 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
TMEM259-208ENST00000592052 USH2AO75445 5202 aa11.15□□□□□ -0.62
TMEM259-208ENST00000592052 FSIP2Q5CZC0 6907 aa11.11□□□□□ -0.63
TMEM259-208ENST00000592052 CRCT1Q9UGL9 99 aa11.07□□□□□ -0.64
TMEM259-208ENST00000592052 R4GN34 69 aa11.03□□□□□ -0.64
TMEM259-208ENST00000592052 Q1T7F1 81 aa11.02□□□□□ -0.64
TMEM259-208ENST00000592052 V9GYY9 64 aa11.01□□□□□ -0.65
TMEM259-208ENST00000592052 KRTAP9-6A0A140TA67 174 aa10.98□□□□□ -0.65
TMEM259-208ENST00000592052 KRTAP19-8Q3LI54 63 aa10.98□□□□□ -0.65
TMEM259-208ENST00000592052 SEC61GP60059 68 aa10.97□□□□□ -0.65
TMEM259-208ENST00000592052 M0QZ58 72 aa10.96□□□□□ -0.65
TMEM259-208ENST00000592052 LINC01558Q9Y6Z2 57 aa10.96□□□□□ -0.65
TMEM259-208ENST00000592052 Q5VV11 94 aa10.95□□□□□ -0.66
TMEM259-208ENST00000592052 SSPOA2VEC9 5147 aa10.9□□□□□ -0.66
TMEM259-208ENST00000592052 MT1BP07438 61 aa10.87□□□□□ -0.67
TMEM259-208ENST00000592052 PRR15LQ9BU68 103 aa10.85□□□□□ -0.67
TMEM259-208ENST00000592052 PSPHP1O15172 72 aa10.84□□□□□ -0.67
TMEM259-208ENST00000592052 A0A1B0GU69 56 aa10.82□□□□□ -0.68
TMEM259-208ENST00000592052 KRTAP19-6Q3LI70 58 aa10.77□□□□□ -0.68
TMEM259-208ENST00000592052 LINC01554Q52M75 96 aa10.77□□□□□ -0.68
TMEM259-208ENST00000592052 A0A1B0GU33 70 aa10.7□□□□□ -0.7
TMEM259-208ENST00000592052 KRTAP13-4Q3LI77 160 aa10.68□□□□□ -0.7
TMEM259-208ENST00000592052 PLAC4Q8WY50 150 aa10.67□□□□□ -0.7
TMEM259-208ENST00000592052 FCGBPQ9Y6R7 5405 aaPredicted RBP10.6□□□□□ -0.71
TMEM259-208ENST00000592052 SPATA8Q6RVD6 105 aa10.55□□□□□ -0.72
TMEM259-208ENST00000592052 A6NN06 94 aa10.55□□□□□ -0.72
TMEM259-208ENST00000592052 A6NED7 52 aa10.51□□□□□ -0.73
TMEM259-208ENST00000592052 KRTAP10-5P60370 271 aa10.51□□□□□ -0.73
TMEM259-208ENST00000592052 UQCR11O14957 56 aa10.48□□□□□ -0.73
TMEM259-208ENST00000592052 A0A0D9SG42 100 aa10.46□□□□□ -0.74
TMEM259-208ENST00000592052 PRO2289Q9P1D8 64 aa10.41□□□□□ -0.74
TMEM259-208ENST00000592052 MT1XP80297 61 aa10.37□□□□□ -0.75
TMEM259-208ENST00000592052 MIR22HGQ0VDD5 57 aa10.36□□□□□ -0.75
TMEM259-208ENST00000592052 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
TMEM259-208ENST00000592052 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
TMEM259-208ENST00000592052 A8MU10 97 aa10.29□□□□□ -0.76
TMEM259-208ENST00000592052 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.27□□□□□ -0.77
TMEM259-208ENST00000592052 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.77
TMEM259-208ENST00000592052 KRTAP12-1P59990 96 aa10.25□□□□□ -0.77
TMEM259-208ENST00000592052 CAMK2N1Q7Z7J9 78 aa10.25□□□□□ -0.77
TMEM259-208ENST00000592052 KRTAP12-2P59991 146 aa10.18□□□□□ -0.78
TMEM259-208ENST00000592052 SVIPQ8NHG7 77 aa10.12□□□□□ -0.79
TMEM259-208ENST00000592052 MACF1Q9UPN3 7388 aaKnown RBP10.09□□□□□ -0.79
TMEM259-208ENST00000592052 PRO0628Q9UI54 55 aa10.07□□□□□ -0.8
TMEM259-208ENST00000592052 KRTAP9-7A8MTY7 169 aa9.96□□□□□ -0.82
TMEM259-208ENST00000592052 K7ERS5 55 aa9.92□□□□□ -0.82
TMEM259-208ENST00000592052 KRTAP10-7P60409 375 aaPredicted RBP9.91□□□□□ -0.82
TMEM259-208ENST00000592052 KRTAP10-12P60413 245 aa9.85□□□□□ -0.83
TMEM259-208ENST00000592052 SYNE2Q8WXH0 6885 aaKnown RBP9.85□□□□□ -0.83
TMEM259-208ENST00000592052 KRTAP6-3Q3LI67 103 aa9.82□□□□□ -0.84
TMEM259-208ENST00000592052 PMAIP1Q13794 54 aa9.79□□□□□ -0.84
TMEM259-208ENST00000592052 KMT2DO14686 5537 aa9.77□□□□□ -0.85
TMEM259-208ENST00000592052 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
TMEM259-208ENST00000592052 KRTAP4-8A0A0G2JLE6 195 aa9.71□□□□□ -0.86
TMEM259-208ENST00000592052 KRTAP4-8Q9BYQ9 185 aa9.71□□□□□ -0.86
TMEM259-208ENST00000592052 KRTAP8-1Q8IUC2 63 aa9.7□□□□□ -0.86
TMEM259-208ENST00000592052 KRTAP5-9P26371 169 aa9.63□□□□□ -0.87
TMEM259-208ENST00000592052 TNP1P09430 55 aa9.61□□□□□ -0.87
TMEM259-208ENST00000592052 SPRR2FQ96RM1 72 aa9.53□□□□□ -0.88
TMEM259-208ENST00000592052 ROMO1P60602 79 aa9.48□□□□□ -0.89
TMEM259-208ENST00000592052 MUC12Q9UKN1 5478 aa9.41□□□□□ -0.9
TMEM259-208ENST00000592052 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
TMEM259-208ENST00000592052 KTN1-AS1Q86SY8 53 aa9.34□□□□□ -0.91
TMEM259-208ENST00000592052 MDN1Q9NU22 5596 aa9.32□□□□□ -0.92
TMEM259-208ENST00000592052 LCE3AQ5TA76 89 aa9.31□□□□□ -0.92
TMEM259-208ENST00000592052 KRTAP19-7Q3SYF9 63 aa9.25□□□□□ -0.93
TMEM259-208ENST00000592052 SPRR2EP22531 72 aa9.22□□□□□ -0.93
TMEM259-208ENST00000592052 SPRR2BP35325 72 aa9.22□□□□□ -0.93
TMEM259-208ENST00000592052 SPRR2AP35326 72 aa9.22□□□□□ -0.93
TMEM259-208ENST00000592052 KRTAP19-5Q3LI72 72 aa9.2□□□□□ -0.94
TMEM259-208ENST00000592052 LCE1AQ5T7P2 110 aa9.18□□□□□ -0.94
TMEM259-208ENST00000592052 PRAC1Q96KF2 57 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms