RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 H1FX-AS1Q4G0G2 97 aa8.5□□□□□ -1.05
AP3D1-211ENST00000591650 SERP1Q9Y6X1 66 aa8.46□□□□□ -1.05
AP3D1-211ENST00000591650 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
AP3D1-211ENST00000591650 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
AP3D1-211ENST00000591650 S4R3F8 94 aa8.36□□□□□ -1.07
AP3D1-211ENST00000591650 A8MUN3 132 aa8.32□□□□□ -1.08
AP3D1-211ENST00000591650 LCA10Q71F78 164 aa8.32□□□□□ -1.08
AP3D1-211ENST00000591650 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
AP3D1-211ENST00000591650 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
AP3D1-211ENST00000591650 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
AP3D1-211ENST00000591650 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
AP3D1-211ENST00000591650 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
AP3D1-211ENST00000591650 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
AP3D1-211ENST00000591650 MT2AP02795 61 aa8.22□□□□□ -1.09
AP3D1-211ENST00000591650 FSIP2Q5CZC0 6907 aa8.21□□□□□ -1.1
AP3D1-211ENST00000591650 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
AP3D1-211ENST00000591650 MT1FP04733 61 aa8.17□□□□□ -1.1
AP3D1-211ENST00000591650 LCE2DQ5TA82 110 aaPredicted RBP8.16□□□□□ -1.1
AP3D1-211ENST00000591650 ACYP2P14621 99 aa8.12□□□□□ -1.11
AP3D1-211ENST00000591650 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
AP3D1-211ENST00000591650 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.11
AP3D1-211ENST00000591650 V9GYY9 64 aa8.06□□□□□ -1.12
AP3D1-211ENST00000591650 Q1T7F1 81 aa8.03□□□□□ -1.12
AP3D1-211ENST00000591650 COA5Q86WW8 74 aa8.02□□□□□ -1.13
AP3D1-211ENST00000591650 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
AP3D1-211ENST00000591650 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
AP3D1-211ENST00000591650 H0YAA0 97 aa7.95□□□□□ -1.14
AP3D1-211ENST00000591650 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
AP3D1-211ENST00000591650 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
AP3D1-211ENST00000591650 USH2AO75445 5202 aa7.9□□□□□ -1.14
AP3D1-211ENST00000591650 LCE2BO14633 110 aa7.89□□□□□ -1.15
AP3D1-211ENST00000591650 PSPHP1O15172 72 aa7.84□□□□□ -1.15
AP3D1-211ENST00000591650 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
AP3D1-211ENST00000591650 P0C880 135 aa7.83□□□□□ -1.16
AP3D1-211ENST00000591650 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
AP3D1-211ENST00000591650 PRR15LQ9BU68 103 aa7.81□□□□□ -1.16
AP3D1-211ENST00000591650 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
AP3D1-211ENST00000591650 BRK1Q8WUW1 75 aa7.8□□□□□ -1.16
AP3D1-211ENST00000591650 PRO0628Q9UI54 55 aa7.8□□□□□ -1.16
AP3D1-211ENST00000591650 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
AP3D1-211ENST00000591650 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
AP3D1-211ENST00000591650 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
AP3D1-211ENST00000591650 Q5VV11 94 aa7.76□□□□□ -1.17
AP3D1-211ENST00000591650 A6NED7 52 aa7.65□□□□□ -1.18
AP3D1-211ENST00000591650 KRTAP19-8Q3LI54 63 aa7.65□□□□□ -1.18
AP3D1-211ENST00000591650 R4GN34 69 aa7.65□□□□□ -1.18
AP3D1-211ENST00000591650 M0QZ58 72 aa7.64□□□□□ -1.19
AP3D1-211ENST00000591650 KRTAP9-7A8MTY7 169 aa7.62□□□□□ -1.19
AP3D1-211ENST00000591650 MT1BP07438 61 aa7.62□□□□□ -1.19
AP3D1-211ENST00000591650 A0A1B0GU69 56 aa7.61□□□□□ -1.19
AP3D1-211ENST00000591650 SEC61GP60059 68 aa7.59□□□□□ -1.19
AP3D1-211ENST00000591650 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
AP3D1-211ENST00000591650 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
AP3D1-211ENST00000591650 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.2
AP3D1-211ENST00000591650 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
AP3D1-211ENST00000591650 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
AP3D1-211ENST00000591650 LINC01554Q52M75 96 aa7.51□□□□□ -1.21
AP3D1-211ENST00000591650 A0A1B0GU33 70 aa7.44□□□□□ -1.22
AP3D1-211ENST00000591650 UQCR11O14957 56 aa7.44□□□□□ -1.22
AP3D1-211ENST00000591650 A8MU10 97 aa7.4□□□□□ -1.22
AP3D1-211ENST00000591650 PMAIP1Q13794 54 aa7.4□□□□□ -1.22
AP3D1-211ENST00000591650 SPATA8Q6RVD6 105 aa7.4□□□□□ -1.22
AP3D1-211ENST00000591650 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
AP3D1-211ENST00000591650 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
AP3D1-211ENST00000591650 A6NN06 94 aa7.33□□□□□ -1.24
AP3D1-211ENST00000591650 A0A0D9SG42 100 aa7.32□□□□□ -1.24
AP3D1-211ENST00000591650 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
AP3D1-211ENST00000591650 SYNE2Q8WXH0 6885 aaKnown RBP7.27□□□□□ -1.25
AP3D1-211ENST00000591650 MT1XP80297 61 aa7.27□□□□□ -1.25
AP3D1-211ENST00000591650 MACF1Q9UPN3 7388 aaKnown RBP7.23□□□□□ -1.25
AP3D1-211ENST00000591650 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
AP3D1-211ENST00000591650 KTN1-AS1Q86SY8 53 aa7.18□□□□□ -1.26
AP3D1-211ENST00000591650 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
AP3D1-211ENST00000591650 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
AP3D1-211ENST00000591650 KRTAP12-2P59991 146 aa7.15□□□□□ -1.27
AP3D1-211ENST00000591650 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
AP3D1-211ENST00000591650 K7ERS5 55 aa7.09□□□□□ -1.28
AP3D1-211ENST00000591650 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
AP3D1-211ENST00000591650 H3BS24 57 aa6.91□□□□□ -1.3
AP3D1-211ENST00000591650 KMT2DO14686 5537 aa6.89□□□□□ -1.31
AP3D1-211ENST00000591650 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
AP3D1-211ENST00000591650 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
AP3D1-211ENST00000591650 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.32
AP3D1-211ENST00000591650 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
AP3D1-211ENST00000591650 NEBP20929 6669 aa6.8□□□□□ -1.32
AP3D1-211ENST00000591650 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
AP3D1-211ENST00000591650 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
AP3D1-211ENST00000591650 ROMO1P60602 79 aa6.76□□□□□ -1.33
AP3D1-211ENST00000591650 KRTAP5-9P26371 169 aa6.74□□□□□ -1.33
AP3D1-211ENST00000591650 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
AP3D1-211ENST00000591650 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
AP3D1-211ENST00000591650 TNP1P09430 55 aa6.66□□□□□ -1.34
AP3D1-211ENST00000591650 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
AP3D1-211ENST00000591650 KRTAP20-1Q3LI63 56 aa6.64□□□□□ -1.35
AP3D1-211ENST00000591650 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
AP3D1-211ENST00000591650 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
AP3D1-211ENST00000591650 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
AP3D1-211ENST00000591650 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
AP3D1-211ENST00000591650 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
AP3D1-211ENST00000591650 SPRR2EP22531 72 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms