RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
PDE4A-207ENST00000590407 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
PDE4A-207ENST00000590407 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
PDE4A-207ENST00000590407 RYR2Q92736 4967 aa6.33□□□□□ -1.4
PDE4A-207ENST00000590407 XP32Q5T750 250 aa6.32□□□□□ -1.4
PDE4A-207ENST00000590407 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
PDE4A-207ENST00000590407 HSPG2P98160 4391 aa6.31□□□□□ -1.4
PDE4A-207ENST00000590407 S4R3F8 94 aa6.31□□□□□ -1.4
PDE4A-207ENST00000590407 ROMO1P60602 79 aa6.3□□□□□ -1.4
PDE4A-207ENST00000590407 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
PDE4A-207ENST00000590407 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
PDE4A-207ENST00000590407 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
PDE4A-207ENST00000590407 Q5VSD8 79 aa6.26□□□□□ -1.41
PDE4A-207ENST00000590407 DMBT1Q9UGM3 2413 aaPredicted RBP6.2□□□□□ -1.42
PDE4A-207ENST00000590407 P0C880 135 aa6.17□□□□□ -1.42
PDE4A-207ENST00000590407 A0A0D9SG42 100 aa6.16□□□□□ -1.42
PDE4A-207ENST00000590407 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
PDE4A-207ENST00000590407 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
PDE4A-207ENST00000590407 RYR1P21817 5038 aa6.12□□□□□ -1.43
PDE4A-207ENST00000590407 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
PDE4A-207ENST00000590407 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
PDE4A-207ENST00000590407 M0QZ58 72 aa6.09□□□□□ -1.43
PDE4A-207ENST00000590407 KRTAP12-1P59990 96 aa6.07□□□□□ -1.44
PDE4A-207ENST00000590407 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
PDE4A-207ENST00000590407 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
PDE4A-207ENST00000590407 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
PDE4A-207ENST00000590407 H3BS24 57 aa6.04□□□□□ -1.44
PDE4A-207ENST00000590407 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.46
PDE4A-207ENST00000590407 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
PDE4A-207ENST00000590407 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
PDE4A-207ENST00000590407 HERC2O95714 4834 aa5.93□□□□□ -1.46
PDE4A-207ENST00000590407 PCLOQ9Y6V0 5065 aa5.9□□□□□ -1.47
PDE4A-207ENST00000590407 LRP2P98164 4655 aa5.88□□□□□ -1.47
PDE4A-207ENST00000590407 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
PDE4A-207ENST00000590407 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
PDE4A-207ENST00000590407 LPAP08519 4548 aa5.85□□□□□ -1.47
PDE4A-207ENST00000590407 R4GN34 69 aa5.83□□□□□ -1.48
PDE4A-207ENST00000590407 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
PDE4A-207ENST00000590407 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
PDE4A-207ENST00000590407 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
PDE4A-207ENST00000590407 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
PDE4A-207ENST00000590407 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
PDE4A-207ENST00000590407 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
PDE4A-207ENST00000590407 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
PDE4A-207ENST00000590407 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
PDE4A-207ENST00000590407 HERC1Q15751 4861 aa5.61□□□□□ -1.51
PDE4A-207ENST00000590407 J3QL48 77 aa5.57□□□□□ -1.52
PDE4A-207ENST00000590407 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
PDE4A-207ENST00000590407 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
PDE4A-207ENST00000590407 FLGP20930 4061 aaPredicted RBP5.52□□□□□ -1.53
PDE4A-207ENST00000590407 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
PDE4A-207ENST00000590407 TNP1P09430 55 aa5.39□□□□□ -1.55
PDE4A-207ENST00000590407 LUZP6Q538Z0 58 aa5.34□□□□□ -1.56
PDE4A-207ENST00000590407 HMCN2Q8NDA2 5059 aa5.34□□□□□ -1.56
PDE4A-207ENST00000590407 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
PDE4A-207ENST00000590407 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
PDE4A-207ENST00000590407 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
PDE4A-207ENST00000590407 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
PDE4A-207ENST00000590407 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
PDE4A-207ENST00000590407 MUC2Q02817 5179 aa5.18□□□□□ -1.58
PDE4A-207ENST00000590407 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
PDE4A-207ENST00000590407 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
PDE4A-207ENST00000590407 MT1HP80294 61 aa5.12□□□□□ -1.59
PDE4A-207ENST00000590407 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.6
PDE4A-207ENST00000590407 M0R2T5 61 aa5.07□□□□□ -1.6
PDE4A-207ENST00000590407 MT2AP02795 61 aa5.07□□□□□ -1.6
PDE4A-207ENST00000590407 MT1FP04733 61 aa5.06□□□□□ -1.6
PDE4A-207ENST00000590407 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
PDE4A-207ENST00000590407 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
PDE4A-207ENST00000590407 KRTAP10-10P60014 251 aa5.03□□□□□ -1.6
PDE4A-207ENST00000590407 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
PDE4A-207ENST00000590407 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.62
PDE4A-207ENST00000590407 MT1BP07438 61 aa4.95□□□□□ -1.62
PDE4A-207ENST00000590407 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
PDE4A-207ENST00000590407 MT1XP80297 61 aa4.93□□□□□ -1.62
PDE4A-207ENST00000590407 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
PDE4A-207ENST00000590407 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
PDE4A-207ENST00000590407 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
PDE4A-207ENST00000590407 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
PDE4A-207ENST00000590407 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
PDE4A-207ENST00000590407 INE1O15225 51 aa4.72□□□□□ -1.65
PDE4A-207ENST00000590407 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
PDE4A-207ENST00000590407 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
PDE4A-207ENST00000590407 LCE2BO14633 110 aa4.58□□□□□ -1.68
PDE4A-207ENST00000590407 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
PDE4A-207ENST00000590407 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
PDE4A-207ENST00000590407 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
PDE4A-207ENST00000590407 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
PDE4A-207ENST00000590407 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
PDE4A-207ENST00000590407 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
PDE4A-207ENST00000590407 KRTAP4-8A0A0G2JLE6 195 aa4.38□□□□□ -1.71
PDE4A-207ENST00000590407 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
PDE4A-207ENST00000590407 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
PDE4A-207ENST00000590407 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
PDE4A-207ENST00000590407 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
PDE4A-207ENST00000590407 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
PDE4A-207ENST00000590407 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
PDE4A-207ENST00000590407 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
PDE4A-207ENST00000590407 USH2AO75445 5202 aa4.29□□□□□ -1.72
PDE4A-207ENST00000590407 MT1LQ93083 61 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms